Micropterus salmoides (largemouth bass): 119888337
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Entry
119888337 CDS
T07309
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119888337 (rfx1a)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Other basic domains
RF-X
119888337 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
119888337
NCBI-ProteinID:
XP_038554805
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MATSGYVGEIQPAAQPQGAGVTVTPGQPDASSTPPTATQFLAEIQTTVATPTVVTPTGQT
TPTDQATSITTQKPAAGSQAQSTAQAPPAQTQYVTAEIQGSPTQSGNAQSTPQYIVVTVT
EGSLHSSDSVSDSSPPPAVVQTGVPTQVVQQVQAAQQRSVVQATSQIAKTEPGTQLSVTS
LQPVHISPELFPSTEVTALVRDNNLEEWQLHHEIRKPECPAWASAGHIQECCGNPLYLPL
DLLQYYQSLYLLSVHADKEIGDQPHQPPLQATTDIFQVQQQLTPVPVQHVYTNQVQYVEG
GDNNYTTSTIRSSAFPYTDTPLYTQTTAAQYYEGQPTSGSQASTPGTPLTVSVTAGTTGG
VSMFVAQPTSAAGGGATVVTTAGTTNGAGEGAGTNGGAAGSYVIQGGYMLGSSSGGTAGN
SQNYSHTARASPATVSITEGEESSVPSADKKVQWLLDNYETAEGVSLPRSTLYCHYLLHC
QEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSSLLRLMEDQQHL
AMRQQPFSQKQRLKPVHKVEGMTNGTASGAGQQQQQQGSGQVDISTQVQQYQQFLDASRA
LPEFPDIDLQGKSLPEGIELEHIKSFQLLYREHCEAILDVMVNLQFTLVETLWKTFWRFS
QSQAGDATLAVHDESEKRLPKSCLVLLCKYEPVLRWSRDCDNSLYQGLVEILIPDVLRPI
PSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSANAFAQTLRRYTSLNHLAQAARA
VLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKLTLQQQNSLEQWAA
WLDGVVSQVLKPYQQSPAFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYD
EYMYYLIEHRVAQAKGETPIAVMGEFASLGRGLSQLDPDKEEEEEEEEESDDEGQELSLP
SDGGVLGEESLEPPAKLARTDQRVLFTTGSADN
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaggctacgtaggtgagatccagccagcagcccaaccccagggggctggt
gttaccgtcacaccggggcaacctgatgccagctcaacgcctccaaccgccactcagttt
ctagctgagattcagactactgtggccactcccactgttgtcacacccacaggtcaaact
actcctactgatcaagccacctccatcaccactcagaagcctgcagctggtagtcaagcc
cagtccacagcacaggcaccgccagctcagacacaatatgtgactgcagagatccagggc
tctcccacacagtctggaaatgctcaaagcactcctcagtacatcgttgtcacagtcaca
gagggctcccttcattcaagtgacagtgtgtcagactccagcccccctccagctgtggtg
cagacaggggttcccacacaggttgttcagcaggtacaggcggctcagcagaggtccgtg
gtgcaggccacctctcagatagccaagactgagccaggcacccagctcagtgtcaccagt
ctacagcctgttcatatcagcccagagctcttccctagcaccgaggtgacagcgttagtc
agggataacaatctagaagaatggcagctgcatcatgagataagaaagccagagtgcccg
gcctgggcatcagcaggccacatacaagaatgttgcggcaatcccctctacctccccttg
gacctccttcagtattaccaatcactgtacttgctctctgtacatgcggacaaagagata
ggagaccaacctcatcagccaccactgcaggctacaactgacattttccaagtccagcag
cagctcacaccagtgccagtgcaacatgtgtacaccaatcaagtgcagtatgtggaagga
ggagacaacaactacaccaccagcaccattcgttccagcgccttcccttacactgacaca
cccctgtacacccagaccactgctgcccagtattatgaaggtcagccaacctcaggctca
caggcctccacccctggtacgcctctaacggtctctgtgactgctggcacaacagggggt
gtgtccatgtttgtggcccagcccaccagtgcagcagggggaggggccactgtggtgacc
actgctggcaccaccaatggggcaggggaaggggcaggcaccaacggtggcgcagcaggc
agctatgtgatccaggggggttacatgctgggcagcagcagtggagggacagctggcaac
agtcagaactactcacacaccgcccgcgcttccccagccactgtgagtattacagagggc
gaggagagtagcgtgccgtcggcagacaagaaggtacagtggttgctggacaactatgag
acagctgaaggagtgagtctgccacgttccaccctctactgccactatctgctgcactgc
caggagcagaaactagagcctgttaatgctgcctccttcgggaaactcattagatctgtg
ttcatggggctacgcacacggcgccttggcacacggggtaattctaaataccactactac
gggctgaggatcaaggcaggctcttctcttctccgcctgatggaagaccagcaacatctg
gccatgaggcagcagcccttctcacagaaacagaggttgaagcctgtgcataaagtagag
ggaatgaccaatggcacagcatcaggagcaggccagcagcagcagcagcaggggtcaggg
caggtggacatcagcacccaggttcagcagtaccagcagttcctagatgcatccagagct
cttccagagttcccagacatcgacctccaggggaagtctctgccagagggcattgagctg
gagcacataaagagctttcagctgctgtacagagaacactgtgaggccatactagatgtg
atggtcaacctgcagtttaccctggttgaaactctgtggaagaccttctggaggttcagc
cagagtcaggccggagatgccacgctagctgtccatgatgagtcagagaagcgtctccct
aagtcctgcctggtgttgctgtgcaagtatgagccagtgctgcgctggagtcgtgactgt
gacaacagcctgtaccagggcctggtggagatcctcatccctgatgtcctaaggcccatc
cccagtgccttaactcaagccatccgcaattttgccaaaagcctggagagctggctgacc
aatgccatgatgaacatccctgaggaaatggtccgcattaaggtaacatcagccaatgca
tttgcccagacactgcgtcgctataccagtctgaaccacctcgcccaggcagcacgcgct
gtcctccagaacacagcccagatcaatcagatgctctccgacctcaaccgtgtcgacttt
gcaaacgtccaggagcaggcttcatgggtgtgccggtgtgaagaccgcgttgtccagcga
ctggagcaggacttcaagctgaccctccagcagcagaactccctggagcagtgggccgcg
tggctggatggtgtggtctcccaggtcctaaagccctaccagcaaagccctgccttccct
aaggctgccaagctcttcctgctcaagtggtccttttacagttccatggtgatcagggac
ctgaccctgaggagtgcagccagttttggttcctttcacctgatccgcctgctgtacgat
gagtacatgtactacctgatagagcacagagtggcccaggctaaaggagagacccccatt
gctgtcatgggagagtttgccagtttaggccggggtctaagccagctggatcctgacaaa
gaagaggaagaggaagaggaagaggagagtgatgatgaaggtcaggagctgtcccttccc
tcagacggaggtgtgctaggggaggagtctctggagcctcctgccaagctggccagaact
gatcagagggtcctcttcacaaccggatcagctgacaactaa
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