Micropterus salmoides (largemouth bass): 119888368
Help
Entry
119888368 CDS
T07309
Name
(RefSeq) rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119888368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119888368
Membrane trafficking [BR:
msam04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119888368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
HH_MFP_RND
Motif
Other DBs
NCBI-GeneID:
119888368
NCBI-ProteinID:
XP_038554847
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYAIIQVGKEKYTTGLVEKAEV
PEWNEECCFELLPGILEDGGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQTIIPLDKIFQD
GVCPRDEWFKLNSKAGRKEKERGELQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRADMESSSAIVPGRYAALSGSLGQPFGEEGRGPVEAPDVEIAEEKRSKMKDFFKGR
LRKSSDTRSCSSLASESSISSMASDNTGPPPSLDLLSDPPSSPIYTSKVRVDTLYGETDL
AKKVLTSQHTTKVLTHKRAFSDEASKISTAFPRTNLAVESLKGQTMTQSKSSLCINGSHI
YDAEPSTPKSLTVHSSKLVLLEKCSPLSRSLQNLTKKSEDKGSFAEGRRWSFDKTKKEER
EEEKEAQASSTPVQQAQIGGHPVETAVLVVSSAANSPEKGRKLRKTLFSGGRSDSLPAKS
DLNQAGSTSEGRIRGWFGSADSQNKPRLEVSPKVESSSDVPPPLPPRSPVPPQSGHVSPD
DCNHTNPFTPSPSPSPSSTPISPSKSFPSHMQRNPFFEELIAEEWQRSPPFGTCSSSSSS
PFHYTTLPSQPCTPSPAHNVNATNMASIKRERPRPVARQISLPALLPKSATPSSPNDSAP
RSMSESTGEWDDSFDAFASSRLNSPKESLPQKQLRTSSITSHRHSYVPVNTNTHAELQTC
EEEPPPLPPRKLMRTSVNEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQRGREGECKRN
SISPDPITSSETSDSLSANSQPYTNITSPGFISEEKLKKFKYEPLEDETDRWGGMFFEQD
LYGRVCRGNYGQPNVNSHRLSLNAEETAENKIISMSSGPKAVLDSEMLNTLSTTPSKPDA
KVLDITTTPVEETECNPLETTCINNNVSFSLTLGDLNMNVNNSDFTFIDSDGSSQSEVVD
APKGISSFGGIFPQPSENLQIAAYHAETKTTVQDMFPLKDTYIPEMNSSFEITASSNKLC
KVSPVCQDNCQDCLRELNNVAPHGNCRREIAAFSSQNQTSNPPDLETESREDIPRSDNFK
KAQNDFDNNGNPEAKTGTLNQKEAFPGVVSARFRPKGVSRQNSSGSPYNQSESGDGDFEQ
LMSLVQNISGVSEGPLSYQPTKSALSSLLALNKETDLQGDNGNKDQTHHNESNTTSQLYS
KDNAVSLHTENCATGKSSVISFEDLHAKVAPNLRTPSKSKIGQSLQEPEPSSPSIPCALS
LSADAPPTLHPTPVCYPSIHPSSVRPSAGDSTTLAVAPYTSFLSSSSYSTTSTTDQPLVD
ARHSLLPEETQPASNLPHLESRPHPVKPLTSSQSEKKEGRSVLEKLKSTIHPGRTAHQVA
AEPERNQEVKVDISAQYQHLTNMELISLLLQQEMDMQKQQVASEQQEAQLQKCEAELKKV
KLQVRDLEDYIDNLLLRIMEQTPTLLQVRTRHK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcactaatagatctggatgatgatcagcgatgggtgcccacccatgtgaatgtc
accgtcctccgcgcaagaggactgcgaaccaagggcaagcacggcagccgctacctctac
gccatcatccaggtggggaaggagaaatacaccaccgggttggtggagaaggcggaggta
cccgagtggaacgaggagtgctgcttcgagctgctccccgggatcctggaggacggcggc
cggagcgcctacccccccgggagcggggacctggtcctcactgtcatgcaccgggtgctt
atcggacttgacgtgtttctcggtcaaaccatcatccctctcgataagatatttcaggac
ggagtatgtcctcgagatgaatggttcaagctcaactctaaggcaggaaggaaagagaag
gaacgtggtgagcttcaggtaacagtccagttcactcgcaacaacatgacagccagcatg
ttcgacctcaccatgaaggacaaacctcgctctgcttttggcaagctcaaagatcgcgtc
acagggaggaagcgggcggacatggaatcttcctctgccattgtgccaggccgctacgcc
gccctgtcaggatccctggggcagccgtttggagaggagggcagagggccggtggaggca
ccagatgtggagatagcagaggagaagaggagcaagatgaaagatttcttcaaaggaagg
ctgcgcaagtcatctgacaccaggtcatgctcatcgctggcttcagagagtagtatttcg
tccatggccagtgataacaccggccctccacccagtctggatctgctgtcagaccctccc
agctctcccatctacactagcaaagtgagagtggacaccctctatggagagacggattta
gctaaaaaagtgctcaccagccaacacaccacaaaggttctcactcacaagcgagccttc
agcgatgaagctagcaagatctcaacagccttccctcgaacaaatcttgcagtggagtct
ctcaagggtcagaccatgactcagtccaagtcttccttgtgtataaatggaagccacatc
tatgacgccgagccatcaactccaaagagcttgacagttcattcgtccaagctggtcttg
ctggagaagtgctccccgctctctcgttccctgcagaaccttaccaagaaaagtgaggac
aaaggttcttttgccgagggccgacgctggtcctttgacaagacgaagaaagaggaaagg
gaagaagaaaaggaagcacaggcttcgtctacccctgttcagcaagctcagataggtggt
caccctgtggagacagcagtgctagtcgtctcttccgccgctaattcacctgagaaagga
aggaagctacgaaagacgttattctctggagggaggagtgattcactcccagctaagtca
gacctgaaccaagctggttcgacatctgaggggaggatcagaggctggtttggctctgct
gactcccagaacaagccaaggctggaagtttctcctaaggtagaaagcagctcagatgta
ccccctcccctccctccgcgctcccctgtaccccctcagtccggtcatgtctcacctgat
gactgcaatcacaccaatcccttcaccccctctccctctccttctccctcctcaaccccc
atctccccttccaagtccttcccctcacatatgcagcgcaaccccttttttgaggagctc
atagctgaagagtggcagaggtcccctccttttgggacttgctcctcttctagctcatcc
ccctttcattacactactctgccttcccagccctgcacacccagccctgctcataatgtc
aatgctacaaatatggcttctataaagcgggagcgccccaggccagtagctagacaaata
tctctccctgcattactacccaaatcagcaacacctagctcccctaatgactctgcccct
cgctccatgtcagaaagcacaggagaatgggatgattcatttgatgcctttgcctccagc
aggctcaactcacctaaagagagtcttcctcagaaacagctgagaaccagttccataaca
tctcatagacatagttatgttccagttaataccaatactcatgcagagctgcaaacatgt
gaagaggagcctccacctttgcctccaaggaaacttatgagaacttcagtgaatgagatt
tactctgatggctggctgcacagaggtcaagaactagctgtccataaagaagcctacctc
ctctcgcagaccggcgtggcctcgctgcaacgtggaagagaaggagaatgcaaaagaaac
agtatatctccagaccctattacgagcagtgagacctccgactccctcagcgctaactct
cagccatacacaaatattacgtcaccgggattcatatctgaagaaaagctcaaaaagttc
aaatatgaacctttggaagatgaaactgaccgctggggagggatgttttttgagcaagac
ttgtatggacgtgtgtgcagaggaaactatggacaacccaatgtaaacagtcatcgttta
tcattgaatgctgaagaaactgctgaaaataagatcatatctatgagctctgggcctaaa
gcagttcttgatagtgagatgttgaacacattatctactactccctcaaagccagatgca
aaggtactagatattacaaccactccagtagaggagacagagtgtaatccacttgaaacc
acatgcatcaacaataatgtgtctttctcactaaccttaggagatctgaacatgaatgtg
aataattcagattttacttttattgattctgatggctcttctcagtcagaggtagttgat
gctcccaagggcatcagtagttttggcggaatttttccacaaccgtcagaaaatttacag
atagctgcttaccatgcagagacaaagaccacagttcaggatatgttccctttgaaggac
acctacatacctgagatgaactcttcctttgaaataactgcctcatctaataaactgtgc
aaagtctctccagtttgccaagacaattgccaagattgtcttagggagctaaataacgtg
gcaccacatggtaactgcagaagagagatcgctgctttttcatcacaaaatcaaacatct
aatccgcccgatcttgaaactgaatctagagaagatataccaagaagtgataatttcaaa
aaggcacaaaatgactttgataataatggaaaccctgaagctaaaacaggcacacttaac
cagaaggaagcatttcctggtgtggttagtgcacgttttagaccaaaaggagtgtcccga
cagaacagcagtggcagcccatacaaccaaagtgaaagcggagacggagattttgaacag
ttgatgtccctcgttcaaaatatttcaggagtcagcgaaggaccattgtcatatcagccc
actaaatcagctctttcttccttactggcattaaataaagagacagatttgcaaggagat
aacggcaacaaagaccaaacacatcacaatgagtctaacacaacatcacaattatattca
aaggacaacgcagtgtctcttcatacagagaattgtgctacaggaaaatcctctgtcatc
agttttgaagaccttcacgcaaaagtagcaccaaacttgagaaccccttcaaagtcaaag
atcgggcaatctttgcaagagcctgaaccctcttctccctccatcccttgtgcactctcc
ctgtcagctgatgctccgcctacgctccaccctacccctgtctgttacccctccatacat
ccctcaagcgtaaggcccagtgctggagacagcactactttggctgtggccccctacacc
tccttcttgtcctcgtcctcctactctaccacctccaccacagaccagcccctggtcgat
gcacggcactcacttttgcctgaggagacacagccagctagcaacctgccccatctggag
agcagacctcatccagtgaagccattaacctccagccagtcagagaagaaggagggccgt
tcggttctggagaagctgaagtcaaccatccaccctggacgcaccgcccaccaggttgca
gcagaacctgagagaaatcaggaggtgaaagtggacatctcagcccagtaccagcacttg
accaacatggagcttatctccctgctgctgcagcaggagatggacatgcagaagcagcag
gtggcctccgagcagcaggaggcgcagctgcagaaatgtgaggctgagctgaaaaaggtc
aagctacaggttcgagacctggaggactacattgataatcttttactgcggatcatggag
cagacgccaacgctgcttcaagtgcgcactagacacaagtga
DBGET
integrated database retrieval system
