Micropterus salmoides (largemouth bass): 119888421
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Entry
119888421 CDS
T07309
Name
(RefSeq) tumor necrosis factor receptor superfamily member 27-like
KO
K05155
tumor necrosis factor receptor superfamily member 19
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119888421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
msam04050
]
119888421
Cytokine receptors [BR:
msam04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119888421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
CGDB
Motif
Other DBs
NCBI-GeneID:
119888421
NCBI-ProteinID:
XP_038554904
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDTLPVEAYFRAALLMVCCVLVQSEPSCDQTEFLHPNGTCVACSVCGPGEELSEDCGFGD
GGEGVCILCEEGKFSADTSVAPCIRCTQCKLLNRLEKTACSPISDAQCGQCLPRYYELRS
MTGEVELACVPCYNHDTAHKECLFLTAQSSKGGVEEETFSIVLIGSATASLVFLIALLLW
AFLLTAERFKRVPEYCPGPEGLLSAEDLQYPPLSNPTERPAKQSEAPSQTLSAQEPLRGL
NPLSHENEVHPTSIVINVTTNIKSSSQKEETITQDEQQSSCYSMEEMEQKLQTIWEMAQG
QSIEILDYDSVQDLSLLLDSADNRNILRRLGRSLGVPPQVIAHLQGFQDLFQYLRTSTYT
LLPQLAQAAALLPNPEVVVRIHRAVMNK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacactttgccagtggaggcttatttccgcgctgctctgctcatggtttgctgtgta
ctggtgcaatctgagcccagctgtgatcaaacagagttcttacaccctaacggcacttgt
gttgcatgctctgtatgtgggccaggagaagagctctctgaggactgtggttttggagat
ggtggtgaaggtgtctgtattctgtgtgaagaagggaagttcagtgcagatacaagtgta
gctccctgcatacgatgcacccagtgcaagctgctgaaccgtctggagaagacagcatgc
tcacccatcagtgatgcccagtgtgggcagtgcctcccacggtattatgaactcaggagc
atgactggggaagtggagctggcctgtgtgccttgttacaaccatgacacagcacataaa
gagtgtttgtttttgacagctcaaagctccaaaggaggagtagaagaagaaacattttca
atagtcctgattggttctgcaacagcctccttggttttcctcattgccctactgctttgg
gctttccttctgactgctgagagattcaagcgggttcctgagtactgtcctggccctgaa
ggactactgtctgcagaagaccttcagtacccccctttgtccaaccccacagagagacca
gccaaacaatcagaggccccttcacagacactttcagctcaagaacccctcagaggccta
aacccactgagccatgagaatgaggtgcatcctacttctattgtgattaatgtcaccacc
aacattaagtcctccagtcagaaagaggagaccatcacacaggatgaacagcaaagcagc
tgttattccatggaggagatggagcaaaaacttcagacgatatgggagatggctcaaggt
cagagtattgagatactcgactatgactccgtccaggacttgtccctgctgcttgactct
gctgacaacaggaacattttgaggagactggggcggtctttgggtgtcccacctcaggtc
atcgctcatcttcaaggcttccaggacctctttcagtacctgcgtacctccacctacaca
ctgcttccccagctggcccaggctgctgcgctcttgcctaatcctgaagttgttgttagg
atacacagggctgttatgaacaagtga
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