Micropterus salmoides (largemouth bass): 119888490
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Entry
119888490 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119888490
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119888490
09142 Cell motility
04820 Cytoskeleton in muscle cells
119888490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Laminin_I
JAG1-like_EGF2
Acid_PPase
CREPT
Motif
Other DBs
NCBI-GeneID:
119888490
NCBI-ProteinID:
XP_038555030
LinkDB
All DBs
Position
Unknown
AA seq
3088 aa
AA seq
DB search
MPSETLQQHIPLLYIHSASYHRGLLRSSSGSTQFSSVQLRSRFAEMKLLLLLLLMERAAA
QQRGLFPAILNLASNAVITSNATCGDPEPEVYCKLVEHVPGRRIKNPHCPKCDANSVLSK
ERHPITNAIDGTNQWWQSPSIKNGRQFHWITITLDLKQVFQVAYIIIKAANSPRPGNWIL
ERSLDGVTFDPWQYYAITDSECLSHYNVTPRLGPPTYKTDTEVICTSYYSRLNPLEHGEI
HTSLINGRPGADDLTSELLNFTSARYIRLRLQRIRTLNADLMTLSARDPRDIDPIVTRRY
YYSIKDISVGGMCICYGHAQSCPLDSVTKKLQCVCEHNTCGESCNECCPGYHQQPWQPGT
ISEGNTCEKCNCHNKAVDCFYNQTVSDLSLSLNTRGVRQGGGVCINCQQNTAGINCETCA
AGYYRTAEVSPYSDSPCVECNCDLRGSDSAVCSRDDTQPGVSAGQCVCKEGFTGRHCDRC
AFGYRDFPLCARCECHLPGSTNTDPCSPCTCKVNVMGAHCDLCKPGFYNLQESNPLGCTD
CFCFGVSDVCENSAWSTAQVLHTDAWLRPSQSHHTTPVVHGNDLPLPGNQSSVHQHLLLW
AAPDSFLGNKLVSYGGVLTYSVVYDVPLDNEVRSLPAHSDIIIKGNGRALRLSPPLLLFL
SPLAERLVAVVMTPQRFVDAQTGVLVTRDDLLSVLTDVTSLRVRVHLNASVDGPIRLSSV
SLDFADSGSDSGVQAVAVETCECPWGYSGTSCEACVPGFYRVGGVLFGGNCMQCECNDHA
TECDINGVCLGCTHNATGPHCDRCLPGFYGDPTEGTADDCRLCPCPLTEPSNSFSPTCVL
EAPGQVSCDQCQDGYTGTNCERCASGFYGNPQVVGGACVRCECNGNVNVSEAGHCHTATG
ECLRCLRNTAGRHCEVCQPGYYGDAVHAKDCRECGCDASGALSSVCDVTAGQCSCRENVT
GRTCDRCQSGFFELQSGQGCRPCGCSQSVALSQSCDDEGRCQCVEGVAGDKCDRCSRGYY
GFHAIGCTACTCDHTGGNCDPVSGECICPTHTEGDTCDRCETGYWGHDPATGCKVSCGVL
WCPVVFSDGALKPWIQIRKPRLNPLKPRCTSRSVCVCVCVCVQVGVAGRRCEECVSGWFA
LSSESPDGCSQCFCSGLSRDCEEQGGLYRVPISLARSAALLPLVSQSNLQGVVSGVYQQG
GDMLLDTRHLNTTGLVGPLYWRLPPQFEGAQLLSYGGLLSYVVTFYAEEGSGLSNQEPQV
LMRGGTLRKLVIYTDMVAPSNGIGTQHDIRMTEHRWRYFNSVSERSVSHTDFMSVISNIE
YIIIKASYGSRLQQSRISNITMETAVEGGLEEESDVGGGVARLIESCICPPGYAGLSCQE
CAAGFFRQPLSELSSQSQKFVRPCVQCRCNNHSEICEPETGHCQGCQHHTSGRSCELCAP
GYYGNVSGSIIDCSLCACPLRHNSFSPTCVSDGALGDFRCTACQTGYEGRYCERCSVGYY
GEPSVPGGVCSPCSCSGWGSLQPLCDTQSGQCECKAGVKGQSCDRCDERHVLQGGECVSC
DDECTGLLLDDLDIIHKHFLSVNLSGVALAPYSQLVSLENQTRDIQVESGNRSLALRLSR
VEDELSHVTSDLSALLQQVTRLSNVLDKVGVSTNDTLSQGALLLENISSLQDNIQVLQRE
AGHLNQTTEEELDSANQMRLLKEVESMLETIRAVNLTAASISANQELSLAQPLLTSLQVD
FLSRKVAVDNRLRPLSAALTAGMETLQHTRTHLSEAAERNTDTHTLLDATHTLLLHYQSL
HQNLTQVCLSVDGVMEDSQMLLDDTVSLTEELTNTTAQVEVFSGQVDQWRPLLAKQVDTL
VVGLRKTDAPENVYRAESHAQLLQSHAHSLHRSLSSVCNVSQNGSRLGQLDSDITERVDS
AQQAASIARVSASLALNMSVQSEQPLSEEGGAKLNVSCALLEESRRINETAQVLQLDVSR
IYSRLGLVRESVRNSSLLLRQPITELQSLSNGSSVALQQVQLQAAAASSGLQEALQRLHR
LRQQLRDSSSVVENTNNTVRETNQLVTRTQAAANEMQHKLEEAERRTERLMDRIKPLSML
GETLSRNLSDIKELIDQARRQAASIKVAVQADRDCVRSYRPPTESSNFNTLSLILKTSSP
DNLLFYLGSNTTVDFLAVEMHDGKVSLLWDVGSGSTRLDFPGLDITNNRWTRINATRFGA
HGALSVHQLESESAPLPTVTATSPGPSRVLDIDRNTVIHIGGLGAHTQSPTALRTSTFQG
CLGEASLNERNVGLWNYDSREGECGGCFSSPQAEETSFHFDGSGFSLVQKSLRATSTSIV
LLFKTLSPGGLLLYLASNNTRDFLSMELVEGRVRLTYDLGSGALMLTSTKKYNTGVWYKI
TLQRNKRKGYLSIMAADQSSEKEVLEAESPGTASDMNRSDLDPIYIGGYPSSRPIRRQVV
SRSYVGCIKNVEIARSNFDLLRDAYGVRKGCVLEAVRSVSVLPGGFVQIAPRSLGQEAEL
LFSFYSNNQSGVLLAAFSNDRTQRHHFLSVHLVSGALEAELGEVGGPSRRVMVVKPDGSF
SDGTRHSVIITINRKSLSLQVDEEHMKSVSLFSGGFSRLSPASFFIGGLPSGEETRLPIR
LQDVSRWFRGCIQHLVVGRALIDLSGAVRYTGVELDSCLLEERVGGVVLPDDQGLEPTPD
PDHLPLAPPTHLSAFTPGALTCVSEAEPTFLQSAAQFGLSKHSHMIFIINPATVRKSVSL
RLSVRSRALDGLILLLSDSKQMDFIVLRLTGGRLMMSADLGKGPASIASSVAVNDGEWHA
VSAEVSRRSMSMSVDGSNPDSVPVKGTQLDVDNRLYLGGVPHTHTTRRINVSSSFPGCIR
LVSLNGATLDLSKPASQHEVTSCFTKDQTGSYFNGSGYAALMRDGYKVGSDVSVSLDLRT
SQSEGVLLGISSAKVDAIGLELINGQVVFNVNNGAGRVSVRSIGQILCDGRWHHLLARKT
KHTLSLSVDGRSYTTQNPHPQSTSAETNNPVYLGGYPVGVKQNCLSTSSRFSGCLKNLQL
VKSHLSDALDLSSAHFLLGVTPNSCPVA
NT seq
9267 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagagactctgcagcaacacattcctctgctctacattcattctgccagctac
cacagaggactgcttaggtccagctcagggtccactcagttcagctcagtccagctcagg
tccaggtttgcagagatgaagctgctgctgttgttgctgttgatggagcgagctgcagct
cagcagagaggtctgttcccagccatcttgaacttggcgagtaacgcagtgattaccagc
aatgcgacatgtggtgatccagaacctgaggtttactgtaaactggtggaacatgttcca
ggacgacgaatcaagaacccgcactgccctaaatgtgatgccaactccgtcctatccaaa
gaacgccatccgataacaaacgccatcgatgggacgaatcagtggtggcaaagtccaagt
atcaagaacggccgacagtttcactggattaccatcaccctggacctcaaacaggtgttt
caggtcgcctacatcatcatcaaggccgcaaactctcctcgcccaggtaactggatcctg
gagcgctctctggacggtgtgacctttgacccctggcagtattacgccatcactgattct
gagtgtttgtctcattataacgtgacgccaagactcggaccaccaacctacaagacggac
accgaggtcatctgcacgtcctactactccagactgaacccgctggagcatggagagatc
cacacctccctgattaacggccgccccggagccgacgatttgacctctgagctcttgaac
tttacgtcagctcgttacatcagactgaggcttcagagaatcagaacgctcaatgccgac
ctgatgacactgagcgcccgcgaccctcgagacatcgaccccatcgtcacccggaggtat
tattactccatcaaagacatctctgttggcgggatgtgtatctgttacggccacgcccag
agctgcccgctggattctgttaccaagaaactgcaatgtgtgtgtgaacacaacacctgt
ggagaaagctgtaacgagtgttgccctggttaccaccagcagccatggcaaccaggaacc
atctctgagggcaacacctgtgaaaagtgtaactgccacaacaaagcagtggactgtttc
tacaatcagaccgtctccgatctgtctttgagtttgaacactcgtggcgttcgtcaagga
gggggagtctgtatcaactgtcagcagaacaccgccggcatcaactgtgagacctgcgct
gctggatactacagaactgccgaggtgtctccatactcagactctccctgtgtggagtgt
aactgtgacctgagaggatcagattctgcagtctgcagcagagacgacacacagccaggt
gtgtctgcaggtcagtgtgtgtgtaaggagggcttcacgggtcggcactgtgatcgctgt
gcatttggataccgagactttcctctgtgtgctcgatgtgagtgtcacctgcccggcagc
accaacacagacccctgcagcccctgcacctgcaaggtgaatgtgatgggagcgcactgt
gatctgtgtaaaccgggtttctacaacctgcaggagagtaatccgctcggctgcactgac
tgtttctgcttcggtgtgtctgacgtttgcgagaactccgcctggtccactgctcaggtg
cttcatacggacgcttggctccgcccctctcagtcccaccacactacacctgtggtccac
ggcaatgacctccctctccctggcaaccagtcttcagtccaccaacacctgttgttgtgg
gcggcgccagacagtttccttggcaacaagctggtatcctatggaggtgtcctgacctac
tctgtggtttatgatgtcccattggacaatgaagtccgttctctccctgcccactctgac
atcatcatcaagggaaatggtcgtgcccttcgtctctctcctcctcttctcctcttcctc
tcgccgctggccgagcgcttggttgccgtggtgatgaccccgcagcgattcgtggacgct
caaacgggcgttctggttacccgtgacgacctgctgtcagtcctcacagacgtgacatca
ctgagggtcagagttcacctgaacgcctctgtggacgggcccatacgtctcagctcggtg
tctctggactttgctgactctggctcagattctggcgttcaggccgttgccgtagagact
tgtgaatgtccgtggggttacagcggtacttcctgtgaggcgtgtgtcccaggtttctac
agggtgggaggagttttgtttggagggaactgtatgcagtgtgagtgtaacgaccacgcc
accgagtgcgacatcaacggtgtttgtttgggttgtacccataatgccactggtccccac
tgtgaccggtgtcttcccggtttttatggcgaccccacggaaggtacagcagacgactgc
cggttgtgtccgtgtcctctgacggagccgtccaacagtttcagtcccacctgtgtgctg
gaggcacctggccaggtgtcatgtgaccagtgtcaggacgggtacacaggaaccaactgc
gagaggtgtgccagcggtttctatggtaacccacaggtagtgggcggggcctgtgtccgc
tgcgagtgtaacggcaacgtgaacgtcagcgaggcggggcactgtcacaccgccaccggg
gagtgtctgcgctgcctcaggaacactgccgggagacactgcgaagtctgtcagcctggt
tattatggagacgccgtgcatgccaaggactgtcgggaatgtggctgtgatgcgagcggc
gccctctccagtgtgtgtgatgtcacagcaggtcagtgttcatgcagagagaacgtgacg
ggacgcacctgtgaccgctgccagtctgggttcttcgagctgcagagtgggcagggctgt
cggccgtgtggctgcagccaatcagtagccctctctcagtcatgtgatgacgaggggcgg
tgccagtgtgtggagggcgtggctggtgataagtgtgaccgctgtagccgtggttactat
ggtttccacgccatcggctgcacagcatgcacctgtgatcacaccggagggaactgtgac
cctgtgagcggcgagtgcatctgccccacccacacagagggagacacctgcgacaggtgt
gagacaggttactggggtcacgaccctgccacgggctgcaaggtgtcctgtggtgtcctg
tggtgtcctgtggtgttctctgatggggccctcaagccctggattcagatcaggaaaccc
cgactaaaccctctgaaaccacgttgtacatcacgctctgtgtgtgtgtgtgtgtgtgtg
tgtgtccaggtgggcgtggcaggtcgccgctgtgaggagtgcgtctctggttggtttgct
ctgtcatctgagagtccggacggctgctctcagtgtttctgttcaggactcagcagggac
tgtgaggagcagggtggactctacagagtacctatcagcctggctcgctctgctgctctc
ctgccattggtcagtcagtctaacctgcagggtgtagtatctggtgtttaccagcaaggc
ggcgacatgctgctcgacacccgacatctcaacaccaccgggctggttggcccgctctac
tggagactgcccccccaatttgaaggcgcccagctgctgtcgtacggcggcctgctgtct
tacgtcgtcaccttttatgctgaggagggctcggggctgtccaatcaggagcctcaggtc
ctgatgaggggcgggaccctaaggaagctggtgatatacactgacatggtcgcccctagc
aacggcatcgggacacagcacgacatcagaatgacagagcaccggtggaggtatttcaac
tcggtgtcggagaggtcagtgagtcacactgacttcatgtccgtcatcagtaacatcgag
tacatcatcatcaaggcctcgtatgggagcagactgcagcagagcaggatctctaacata
accatggagacagcagtggagggcgggttagaggaggagtcagatgttggaggtggtgtg
gccagactgatcgagtcctgcatctgtccacctggatacgccggactgtcctgccaggag
tgtgctgcaggttttttccgtcagcctctgtctgagttgtcgtctcagagtcagaagttt
gttcgtccgtgtgttcaatgtcgctgcaacaaccacagtgagatctgcgagccggagacg
ggacactgtcagggctgtcagcatcacaccagtgggcggagctgtgagctgtgtgccccg
gggtattatgggaacgtcagcggctccatcattgactgctcgctgtgtgcctgcccccta
cggcacaacagtttcagccccacctgcgtgtcagacggagcgcttggtgatttccgctgc
accgcctgtcagacgggctacgaggggaggtactgcgagaggtgttctgttggttactac
ggtgagccgtcggtgccgggcggcgtgtgctcgccgtgcagctgcagcgggtggggctct
ctgcagccgctgtgtgacacgcagagcggacagtgtgagtgcaaggccggggtcaaaggt
cagtcctgtgaccggtgtgacgagcgccacgtcctgcagggaggagagtgtgtgtcgtgt
gatgacgagtgcaccggcctcctgctggacgacctggacatcatacacaagcacttcctg
tctgtcaacctgagcggcgtggccttggcgccctacagccagctggtgtcactggagaac
cagaccagagacatccaggtggagtcgggaaaccgctcgctcgctctgcgtctgtccaga
gtggaagacgagctgagtcacgtgacctctgacctcagcgctctgctacagcaggtcaca
cgtctgtctaatgtcctggacaaagtgggtgtgtccaccaatgacaccctttcccagggt
gcactgctgctggagaacatcagcagccttcaggacaacatccaggtgcttcagagggag
gcggggcatctgaaccagaccacagaagaggagctggattcagccaatcaaatgcgtctg
ctgaaggaggtggagtccatgttggaaaccatcagagctgtcaacctgacggctgccagc
atctcagccaatcaggagctcagcctcgcacagcctctcctcacctcgctgcaggtggac
ttcctgtccagaaaggtggcggtggacaacaggctccgccccctttctgctgctctcacc
gctggcatggaaacactgcaacacacgcgcacacacctgagcgaggcagcagaacgaaac
acagacacacacactctgctggacgccacacacactctactgctccactaccagtctctc
catcagaacctgactcaggtgtgtctctctgtggacggcgtgatggaggacagccagatg
ctgctggacgacactgtcagcctgacggaggaattgaccaacaccaccgcgcaggtggag
gtgttcagcgggcaggtggatcagtggcgccccctgctggcgaagcaggtggacactttg
gttgttggactgagaaagacggacgctccggagaacgtttaccgtgcagaaagccacgcc
cagctgctgcagagccacgcccactccctgcacaggtctctgtcgtcagtgtgtaacgtt
tctcagaacggtagccgattgggtcagctggacagtgacatcacagaacgtgttgactct
gcccagcaggcggcctcgatcgcccgcgtctccgcctccctcgctctcaacatgagcgtc
caatcagagcagccgctgtcagaggagggcggggccaagctgaatgtcagctgtgctctt
ctagaagaaagtcgacgaatcaacgagacggctcaagtcctgcagctggatgtctcgagg
atatacagtagactgggattggtcagagagagtgtccggaactccagcctcctcctccgt
cagccaatcacagagctgcagagtctctctaacggttcgtccgtggcgctgcagcaggtg
cagcttcaggcggcagcggcgagctccggcctgcaggaggcgctgcagcggctgcacaga
ctcagacagcagctgcgggattcttcttctgtggtggaaaacaccaacaacacagtgagg
gagaccaaccagctggtgactcgcactcaagccgcagccaatgagatgcagcataagctg
gaggaggcggagcgtcgtacagagcgcctgatggaccggataaagccactgagcatgctg
ggagaaacactgagccggaatctgtctgacatcaaagagctgatcgatcaggccaggagg
caggccgcctcgatcaaggtggcggtccaggcggacagagactgtgttcggtcctacaga
ccacccactgagtccagtaacttcaacactctgagtctgatcctgaagacgtccagtcca
gataacctgctcttctacctgggcagcaacaccacggtggacttcctggcagtagagatg
catgatgggaaggtttccctgctgtgggacgtgggttcgggcagcaccagactggacttt
cccggactggacatcaccaacaacagatggaccagaatcaacgctacacggtttggggcc
cacggcgctctgtcggtccatcagctggagtccgagtcggctccgctgcccacggtaaca
gcgacatcaccgggaccgtcacgggttttagacatcgacagaaacacggtgatccacatc
ggaggactgggagctcacactcagagccccacagcgctgaggacctccaccttccagggc
tgtctgggtgaagcatcgctcaacgagagaaacgtcggtctgtggaactacgacagccga
gagggagagtgtggaggctgcttcagcagtccccaggcggaggagacgtccttccacttt
gatggatctggattctcattggttcagaagtctctgcgagcaacctccacctccatcgtc
ctactgtttaaaacgctgtctccgggcggattgctgctgtacctggcctccaacaacacg
agggacttcttgtccatggagctggtggaggggcgtgtccgtctgacctatgacctcggc
tcaggagctctgatgctgacctccaccaagaagtacaacacaggagtctggtacaagatc
acgctgcagaggaacaaacgcaaaggttacctgtccatcatggcagccgaccaatcatca
gagaaggaggtgttggaggcggagtctcctgggacggcctctgacatgaaccgctccgac
ctcgaccccatctacatcggaggatatccttcctccagaccaatcaggcgacaggtggtc
tccaggtcgtacgtgggctgtataaagaacgtggagatcgctcggtccaactttgacctg
ctgagagacgcgtacggagtgaggaagggctgcgtcctcgaggcggtgcgcagtgtgtcg
gtgttgcccggaggcttcgttcagatcgctcctcgctcgctcggtcaggaggcggagctt
ctcttctccttctactccaacaaccaatcaggagtcctgctggctgccttcagtaacgac
cgaacacagagacatcacttcctgtcagtgcacctggtctcaggagcgttggaggcggag
ctcggtgaggtgggtggccccagtcggagggtgatggtggtgaaacctgatggatccttc
agtgacggaacaagacactctgtgatcatcactatcaacaggaagtctctgtccctgcag
gtggatgaggaacacatgaagtccgtctctctgttttctggaggattttcccgtctgtct
ccagcctctttcttcattggtgggctgccatcaggggaggagactcgtctaccaatcaga
ttacaggatgtgtccaggtggttcagaggttgcatccaacacctggtggtgggcagggcg
ctcattgacctatcaggagccgtgaggtacacaggtgtggagctcgacagttgcctattg
gaggagagagttgggggggtggtgcttcctgatgatcagggtttagaaccaactcctgac
cccgaccacctgcctttagccccgcccacacacctgagcgccttcacacctggagcgctg
acgtgcgtgtcggaggcggagccaaccttcctgcagtcagcggctcagtttggtttgtcc
aaacacagtcacatgatcttcatcatcaaccccgccacagtcagaaagagtgtgtctctc
aggttgtctgttcgaagccgagctctggacgggctcatcctcctcctctcggactccaaa
cagatggacttcatcgtcctcagactgacgggggggagactgatgatgtcagctgacctg
gggaaaggccccgcctccatcgcctcgtctgttgcagttaacgacggagagtggcacgct
gtgagcgctgaggtcagccggcggtcgatgtcgatgtcagtcgacggttcaaatccggac
tctgtgccggttaaagggacccagctggacgtggacaacaggctgtacctgggaggagtg
ccgcacacacacaccactaggaggattaacgtaagcagtagtttcccaggttgcattcgc
ttggtcagtctgaacggagccacgctggatctgtccaagccggcctcgcagcatgaggtc
acttcctgtttcaccaaagaccagaccggaagttacttcaacggcagtggatacgccgcc
ctcatgcgagacggttataaggtcggctctgacgtgtcagtgtctctggacttacgaaca
agccaatcagagggagtgcttctgggaatcagcagcgcgaaggttgacgctatcggacta
gagctgatcaacggacaggtggtgtttaacgtgaataacggcgcggggcgagtgtcggtg
cgttcgatcggtcagatcttatgtgatggacgctggcaccacttgctggccagaaagacc
aaacacaccctgagtctgagtgtagacgggcggagttacaccacccagaacccccaccca
caatccacctctgcggagacaaacaaccctgtttacctgggaggctatccagtcggtgtg
aagcagaactgcctgtccaccagctccaggttctcaggctgtttgaagaacctgcagctt
gtcaagtctcacctgagtgacgcgctggacctgagctccgcccacttcctgttgggcgtc
actcctaactcatgtcctgttgcctag
DBGET
integrated database retrieval system
