KEGG   Micropterus salmoides (largemouth bass): 119888524
Entry
119888524         CDS       T07309                                 
Symbol
vimr2
Name
(RefSeq) desmin
  KO
K07606  vimentin
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:msam00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119888524 (vimr2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119888524 (vimr2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:msam04812]
    119888524 (vimr2)
   04147 Exosome [BR:msam04147]
    119888524 (vimr2)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     119888524 (vimr2)
Cytoskeleton proteins [BR:msam04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     119888524 (vimr2)
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119888524 (vimr2)
  Exosomal proteins of other cancer cells
   119888524 (vimr2)
SSDB
Motif
Pfam: Filament DUF2443 TPR_MLP1_2 ATG16 DUF6594 PI3K_P85_iSH2 DUF7801
Other DBs
NCBI-GeneID: 119888524
NCBI-ProteinID: XP_038555044
LinkDB
Position
Unknown
AA seq 387 aa
MAMLRVSSYRKLFEDDNWSRNGGLSMHTSFPSLRGAAVEKCDCDKLDFVAAKALNKEGLN
RFVQDRTIIATLNDRLVRLIELAHCFEEENESLECQIVKLEEKLNSRQVTSSITSTVAEP
EYSLDAVVERLRRERDAILCDTEELQKELELLMKEYEKAAQQRVLSQQERQDVAEEVDAV
TAECLALREQVAIYEEQLANMEAQHKEAVETLLEPAERTTGAVAAIKFGSPDMTPALDIK
EYYCQLAESLQYECGAASSAVVHSHDGRQLEVGGAVGSTVKDLPKIKDISEMKMLISELQ
KELAELEKCNEELEDEAERKKAAYMDEIAELECTIDEMRHQEVNFQVQMKDQCEDYKELL
SEKMARDMEIAAYRCLVKEEEERLCNL
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggccatgcttagagtttcttcttaccgcaagctgtttgaggatgataattggagtcga
aatggagggttgagtatgcatacttcctttccttctctcaggggtgcggctgttgagaag
tgtgactgtgacaagttagattttgtggctgccaaggcgctgaacaaggaaggtctgaac
cggtttgtccaggaccgcaccatcattgctacccttaatgaccgcctggtcaggcttatt
gaactggcccattgttttgaggaggagaatgagtctcttgaatgtcagattgttaaacta
gaagagaagctgaacagtcgacaagtcacctccagcatcacctccactgtggctgagcct
gaatacagtctggatgcagtggtggaaagactgcgcagggagagggatgcgattctgtgt
gacaccgaggagctgcagaaagagcttgaacttctgatgaaagagtacgagaaggctgca
cagcagagggtcctctcacagcaggaacgacaagatgtagctgaggaagtggatgccgtg
acagcagagtgcttggcgctgagggagcaagtggctatctatgaggagcagctggccaac
atggaggctcagcacaaggaggcagtggagactctgctggagccagctgaacggactaca
ggagcagtggcagctattaaatttggcagccctgatatgactccagccttggacataaag
gagtactactgccagctggctgagagcctccagtacgagtgtggtgcagcctcttctgct
gtggttcacagtcatgatggaagacaactggaagtgggaggagctgtagggtcaacagtg
aaagacttgccaaagataaaggacatcagtgagatgaagatgctgatttcagagctacaa
aaggagcttgctgagctcgagaagtgtaacgaggagctggaggacgaggctgagaggaag
aaggctgcctacatggacgagattgctgagctggagtgtactatagatgaaatgcggcac
caggaggtcaacttccaagtgcagatgaaggatcagtgtgaagactacaaggagctgctc
agtgagaagatggccagagacatggaaattgctgcctacaggtgtctggttaaggaagaa
gaggagaggctgtgcaacctgtga

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