Micropterus salmoides (largemouth bass): 119888745
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Entry
119888745 CDS
T07309
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119888745 (upf3b)
03015 mRNA surveillance pathway
119888745 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119888745 (upf3b)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119888745 (upf3b)
mRNA cycle factors
P-body specific factors
119888745 (upf3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
119888745
NCBI-ProteinID:
XP_038555368
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MKEDKENTRPKEKKVEIKCEDGEKTEKPKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYLEFFSNDTSLYPHLFARAYINFKNQEDIVLFRDRFDGYVFIDSRGQEYPAIVEFAP
FQKTAKKRSKKRDAKCGTIVEDPEYKKFLEYYNGDEEKLASTPETLLEELEAKSKELVAK
KTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEERRKRKDAEKMKRLEK
PLEKDKDQVKEEPKIKLLKKPDRGDNADSEKPKEKVKKPEKPNKEDRSMGSADHKRRQNI
ENKDDRGRKVDEDGRKEFRERGVDRDREREREREKERRQKEKERIRRQDEDRRRRRDRQD
GENSGRRREEEVKKDKERVFEKKKGENTGDSTHSDRAEKPARDSKREESSKRERLRNKDR
PAIQLYQPGARSRNRGGGGGGGAGRGAESNSADRKADTETEKVADKGDD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagacaaagaaaacactcggccgaaggagaaaaaagtggaaataaagtgtgaa
gatggagaaaagacggagaagcccaaggaaaagaaagaggccatgacaaagatcgtgatc
agacgattaccaccaagtctgaccaaggaagagctggaggagcagctgcaacctctccca
gaggtggactacctggagtttttctccaacgacaccagtctttacccacacctcttcgca
agggcgtacataaatttcaaaaatcaagaggatatagttctcttcagagatcgatttgat
ggatatgtcttcatcgacagcagaggacaggagtatcctgccattgtggagtttgcacct
tttcagaagactgccaagaaaagaagtaagaaaagggatgccaaatgtggaacaattgtt
gaagatccagaatacaagaagttccttgaatattacaacggagatgaagaaaagttggca
tcaacacctgagaccctgttggaagagcttgaggcaaaatcaaaggaacttgtagctaaa
aaaacaactcctctgctggacttcctgaagaataaacagagaatcagggaggaaaagaaa
gaagagagaagaaggagggagcttgaacgcaagcgtttacgcgatgaggagcgtcgcaag
tggagggaggaggagagaaggaagcgcaaagacgcagagaagatgaagaggctcgagaaa
cctctggagaaagacaaggaccaagttaaagaagaaccaaaaattaagctcctgaagaag
ccagatagaggtgataatgctgattctgagaagcccaaagaaaaggttaagaaaccagag
aagccaaataaagaggacaggtccatggggagtgctgatcataagaggcgccagaacatt
gaaaataaggatgatcgaggaaggaaggtggacgaagatgggcgtaaggagttcagggaa
cgtggtgtagatcgagacagagagcgcgaacgagagcgggagaaggaacggcggcagaag
gagaaggagcgcatcaggcgacaggacgaagatcgccgtagaaggagagatcggcaggat
ggagagaactcgggcaggaggcgggaggaggaggttaaaaaagacaaagagcgtgtcttc
gagaagaaaaagggtgaaaacactggagactccactcactctgacagggccgagaagcct
gccagagacagcaaaagggaggagagcagtaaaagagagcggctacgaaataaggaccgg
ccagctattcagctgtaccagccaggggccagaagccgcaatcgaggaggaggaggagga
ggtggagcaggaagaggagccgaatccaactctgccgacaggaaggcagatactgagacc
gagaaagtggctgacaaaggagacgattga
DBGET
integrated database retrieval system
