Micropterus salmoides (largemouth bass): 119888840
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Entry
119888840 CDS
T07309
Symbol
syvn1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
msam04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119888840 (syvn1)
04120 Ubiquitin mediated proteolysis
119888840 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119888840 (syvn1)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119888840 (syvn1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119888840 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
119888840
NCBI-ProteinID:
XP_038555530
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISCIFHLRVLSLMGLLAVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPVRSRPPAPAAPANAP
AAPPANVAPGMLPGFPPGIFPFWGPFPAVPPPAAPAAAPGASDAPRSSTEATQAAGTSQP
TSSTTDAAAAAAAAAAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLS
RLSEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLNPPRAGGSAGE
ASGTNNAASSPAAGGSTDSASQEKDSPSSERVEGATVSSQLPDSTSPALDTESKEKMDEG
AVSVGDEDGEPNAAELRRRRLRKLETATSSSASSSPPPDN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagcagccttggtgacagccaccagtctggcactgactggggctgtggtggca
catgcttacttgctcaaacaccagttctacccaactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacatccaggcctttgttttggtgtttctgctgggaaagttc
atgcggaaggtctttttcggacagctaagggctgcagaaatggagcatctcatcgagcgc
tcctggtacgcagtgacagagacatgcctggcattcactgtgtttagggatgacttctcc
cctcgctttgtcgccctcttcaccctcctgctcttccttaagtgcttccactggctggct
gaggaccgggtggactttatggagcggagtccaaacatatcttgtatttttcacttgaga
gtattatctctcatgggactgctggctgtcatggacttcctgtttgtcaaccatgcgtgt
cacagcatcattacccgaggagcctcagtccagcttgtttttggatttgagtatgccatc
ctgctgaccatggtgctgacgaccttcattaagtaccttctgcacactatcgacctgcag
agtgaaaatccctgggacaacaaggccgtctatatgctctacactgagctcttcacaggt
ttcatcaaagtgctcctgtacattgccttcatgaccatcatgattaaggtccacaccttc
cccctgtttgccattcgccccatgtatctggctatgaggcagttcaagaaagctgtaacg
gatgctataatgtctcggagagccatccgcaacatgaatacactatatcctgatgctact
cctgaagatctgcaggcctctgacaatgtctgtatcatttgtcgagaggaaatggtcacc
ggagccaagaaactaccttgtaatcacattttccattccagctgcctgcgctcctggttc
cagaggcagcagacctgccctacctgtcgcatggacgttctgcgtgcatctaataacaat
cagactccagcccccgttaggtcccgcccccctgctcctgcagcccccgccaacgcccca
gcagccccacctgccaacgtagccccaggaatgttacctgggttccctcctggcatcttc
cccttctgggggcccttccctgcagtgcctcctcctgctgcaccagctgcagctcctggt
gctagtgatgcaccacgaagcagcacagaggccacacaggcagctggtaccagccagccc
acctcatcaactacagacgctgctgcagctgctgcagctgctgctgctgctccgggatca
gcaatcccgggcttccccttctccttcccccctcctcccttccccactgccccatggctc
cccatgccacctcctcctccatttgtgtcatcaatgcctccgcctcctccgtctctgtcc
cggctgtcagaggaggagctgagggagctggaggcagaaggccgaaggggcctcgaggcc
aggctccagtgtctccagaacatccacaccctgctggacgccgccatgctcaacatccac
cactacctcagcacggtggccacactcaatcctcctcgggctgggggcagcgctggagaa
gccagtgggacaaacaacgctgcttcatctcctgcagctggcggcagcacggacagtgcc
agccaggagaaggactctcccagctctgagcgggtcgagggagctacagtctcctctcag
ctacctgactctacttctcctgccttggacacagaaagcaaagaaaagatggacgaagga
gcagtgtctgtgggggacgaggatggagaacccaacgccgcagagctgaggcgccgccgc
cttcgcaagctagagaccgcaacatcgtcgtcagcatcgtcctcaccccctccagacaat
tga
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