Micropterus salmoides (largemouth bass): 119888852
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Entry
119888852 CDS
T07309
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119888852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msam03009
]
119888852
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119888852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_pof12
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
119888852
NCBI-ProteinID:
XP_038555559
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MANANLQFKTNYVVSSKIEPFYKGGKVQISKDEKYIFCTCGSRVNVLEISTGKIVHSVEH
DDQEDITSFALSCDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTVPVASMTFDSTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVQFHPDINRLQLFSSSLDCGIRLWDLR
SSQCVCVLQSHYSAVTSLSFSPDGGTMVSSGRDQICTVWDLKTRKATRTVPVYEAVEGVV
LLPEKEDFSEIGVKSKDLHFITAGSKGVLRVWEASTSRCVYTQTLPSTLTTVSEAEGEEE
EKDDDPRGLTYLLHLPASSRLASVTAEHNILLYQLPGLTTQQQFVGYSDEVLDVKFLGKG
DSHIVVATNSSQLKVFELLTNSCQILYGHTDTVLSLDVFKKGFVFASCAKDRSVRVWQMD
SDSGQVHCVAQGSSHTNAVGSIACSRMKASFIVSGSQDCTVKVWDLPADLSTAGADENQL
TARATEKAHDKDVNSVAVSPNDKLLASGSQDRTAKLWSLAGEGRVGLLGVFRGHRRGVWA
VCFSPVDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGSDGL
VKLWTIKTNECVKTLDAHQDKVWGLHATRKDDKMVTGSADSNITVWVDVTEVELAEEQAK
QEDQILKQQELSNLLHEKKYLKALGLAISLDQPHTVLSVIKAIRQGEDSRELLEKMVLKL
RQDQKESILRYCVVWNTNARNCHDAQAVLQVLLTHLPPEELLQYQGARTHLEGLIPYTER
HMQRIGHLLQASMFLNYMWQNMRVAGAPPSMGQDEEMDTTPLAQPFFIIDKEKGTDRGDE
DKRDEDDSEGGGEEEEEEDDDDDEVSVSKKASTYNGRVENGKTTKTNGNHLSDSEESSEE
EDVEEDATVKVVKRLPVSSTPQCQTSTS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgccaatcttcagttcaaaacaaactacgttgtttccagcaaaatagaaccg
ttttacaaaggagggaaagtgcagatcagcaaagatgaaaaatacatcttttgcacttgt
ggatctcgtgtcaatgttttggagatcagtacagggaagatcgtccacagcgttgagcat
gatgatcaagaggacatcacgtcttttgcactcagctgtgatgacgagctgctggtaacg
gccagtagagctctgctgctgaagcagtgggattggaggcaagctcagtgtacacgctcc
tggagggccattcacactgttcctgtagccagtatgacctttgactccacctctacactc
ctggcgacaggtggctgtgatggcactataaagctttgggatgtagtgaagcagtactgc
acccacaaccttaaagggtcatctggagttgtacatctcgtccagttccacccagacatc
aacaggctgcagctgttctcctcctctctggactgtggcattcgcttgtgggacctgcgc
tccagtcagtgtgtgtgtgtgctacagagccactacagcgctgtgacctccctcagcttc
agccccgacggtggcaccatggtcagttctggcagagaccagatatgtacagtgtgggac
ctgaagacccggaaagccacgagaactgtacctgtctatgaggctgtggagggtgttgtg
cttctgcctgagaaagaggacttctctgagatcggagtgaagagcaaagacttgcatttc
atcacagctggcagcaagggtgtattgagagtgtgggaggccagcacgtcgcgttgtgtc
tacacccagaccctcccctccaccctcaccactgtctctgaggctgagggggaggaggaa
gagaaggacgacgacccccgcggtcttacatatctccttcacctgcccgcctcttccaga
ctggcctcagtcacagcagaacacaacatactgctctaccagttgcctggtctcaccaca
cagcagcagtttgtgggctacagtgatgaggtgctggacgtgaagtttctgggcaaaggg
gacagccacattgtggtggccaccaacagctcccagctgaaggtgtttgagctgctcaca
aacagctgccagatcctctacggacacacagatactgtcctctcattggacgtgttcaaa
aagggttttgtctttgcaagctgtgcgaaggacaggtcagtgcgtgtgtggcagatggac
agtgacagtggtcaggtgcactgtgtggcccagggctccagccacactaatgctgtgggc
tccatcgcctgctccaggatgaaagcatcgttcatagtgtctggcagtcaggactgtact
gtgaaggtgtgggatctgccagcagacttgtctacggcaggagctgatgaaaatcagctg
accgcccgcgccacagagaaggcacatgataaggatgtaaacagcgtagcggtgtcaccc
aacgacaaactgctggcttccggctcacaggaccgcacggccaagctgtggtcgttggcg
ggggaggggagagtgggcctgctgggggtgtttaggggccaccgtcgcggtgtctgggcc
gtctgcttctctcccgtcgaccaggtgttggccacgtcctctgcggacggcaccaccaaa
ctgtggagcctacaagacttcagctgcctcaagacattcgagggtcacgatgcatccgtg
ttgaaggtcgtctttgtgagccgaggcactcagctgctctccagtggctcagatggttta
gtaaagctgtggaccataaagaccaatgagtgtgtgaagacgctggacgcccaccaggac
aaagtgtggggtctccacgctacccgcaaagatgacaagatggtgaccggctcagcagac
tctaacatcactgtgtgggtggatgtgactgaggttgagctggcggaggagcaggccaag
caggaggatcagatactcaagcagcaggagttgtccaacctgctccatgagaagaagtat
ctgaaggccctgggtcttgccatctcactggaccagcctcacactgtgctcagtgtgatc
aaagcgatccgtcagggggaggatagccgtgagctgttggaaaagatggtgctgaaactt
cgccaggatcagaaagagtcgatcctgcgctactgtgtggtgtggaataccaacgccaga
aactgccatgatgcccaggccgtcctacaggtgcttctcacacacctgccacccgaggag
ctgctgcagtaccagggcgcccgaacccacctcgagggactcatcccatacacagagaga
cacatgcagaggattggccatctgttgcaggcatccatgttcctgaactacatgtggcag
aacatgagagtggcgggagccccacccagcatgggccaagatgaagagatggataccact
cctcttgcacagcccttctttataattgacaaggagaaagggacagacaggggtgatgag
gacaaacgagatgaagacgacagcgaaggaggaggagaagaagaagaagaagaggacgac
gacgacgacgaagtcagtgtcagcaaaaaagcctccacctacaacggacgagtggaaaac
ggaaagaccaccaaaacaaatggcaaccacctctctgatagtgaggagagttcagaagag
gaagacgtggaagaagatgcaacggtaaaagtggtgaaacgcctcccagtttcttcaact
ccacaatgccagacttcaaccagctga
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