KEGG   Micropterus salmoides (largemouth bass): 119888852
Entry
119888852         CDS       T07309                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    119888852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msam03009]
    119888852
Ribosome biogenesis [BR:msam03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    119888852
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Utp13 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WDR55 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Aladin ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_pof12 Cytochrom_D1
Other DBs
NCBI-GeneID: 119888852
NCBI-ProteinID: XP_038555559
LinkDB
Position
Unknown
AA seq 928 aa
MANANLQFKTNYVVSSKIEPFYKGGKVQISKDEKYIFCTCGSRVNVLEISTGKIVHSVEH
DDQEDITSFALSCDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTVPVASMTFDSTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVQFHPDINRLQLFSSSLDCGIRLWDLR
SSQCVCVLQSHYSAVTSLSFSPDGGTMVSSGRDQICTVWDLKTRKATRTVPVYEAVEGVV
LLPEKEDFSEIGVKSKDLHFITAGSKGVLRVWEASTSRCVYTQTLPSTLTTVSEAEGEEE
EKDDDPRGLTYLLHLPASSRLASVTAEHNILLYQLPGLTTQQQFVGYSDEVLDVKFLGKG
DSHIVVATNSSQLKVFELLTNSCQILYGHTDTVLSLDVFKKGFVFASCAKDRSVRVWQMD
SDSGQVHCVAQGSSHTNAVGSIACSRMKASFIVSGSQDCTVKVWDLPADLSTAGADENQL
TARATEKAHDKDVNSVAVSPNDKLLASGSQDRTAKLWSLAGEGRVGLLGVFRGHRRGVWA
VCFSPVDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGSDGL
VKLWTIKTNECVKTLDAHQDKVWGLHATRKDDKMVTGSADSNITVWVDVTEVELAEEQAK
QEDQILKQQELSNLLHEKKYLKALGLAISLDQPHTVLSVIKAIRQGEDSRELLEKMVLKL
RQDQKESILRYCVVWNTNARNCHDAQAVLQVLLTHLPPEELLQYQGARTHLEGLIPYTER
HMQRIGHLLQASMFLNYMWQNMRVAGAPPSMGQDEEMDTTPLAQPFFIIDKEKGTDRGDE
DKRDEDDSEGGGEEEEEEDDDDDEVSVSKKASTYNGRVENGKTTKTNGNHLSDSEESSEE
EDVEEDATVKVVKRLPVSSTPQCQTSTS
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggcaaacgccaatcttcagttcaaaacaaactacgttgtttccagcaaaatagaaccg
ttttacaaaggagggaaagtgcagatcagcaaagatgaaaaatacatcttttgcacttgt
ggatctcgtgtcaatgttttggagatcagtacagggaagatcgtccacagcgttgagcat
gatgatcaagaggacatcacgtcttttgcactcagctgtgatgacgagctgctggtaacg
gccagtagagctctgctgctgaagcagtgggattggaggcaagctcagtgtacacgctcc
tggagggccattcacactgttcctgtagccagtatgacctttgactccacctctacactc
ctggcgacaggtggctgtgatggcactataaagctttgggatgtagtgaagcagtactgc
acccacaaccttaaagggtcatctggagttgtacatctcgtccagttccacccagacatc
aacaggctgcagctgttctcctcctctctggactgtggcattcgcttgtgggacctgcgc
tccagtcagtgtgtgtgtgtgctacagagccactacagcgctgtgacctccctcagcttc
agccccgacggtggcaccatggtcagttctggcagagaccagatatgtacagtgtgggac
ctgaagacccggaaagccacgagaactgtacctgtctatgaggctgtggagggtgttgtg
cttctgcctgagaaagaggacttctctgagatcggagtgaagagcaaagacttgcatttc
atcacagctggcagcaagggtgtattgagagtgtgggaggccagcacgtcgcgttgtgtc
tacacccagaccctcccctccaccctcaccactgtctctgaggctgagggggaggaggaa
gagaaggacgacgacccccgcggtcttacatatctccttcacctgcccgcctcttccaga
ctggcctcagtcacagcagaacacaacatactgctctaccagttgcctggtctcaccaca
cagcagcagtttgtgggctacagtgatgaggtgctggacgtgaagtttctgggcaaaggg
gacagccacattgtggtggccaccaacagctcccagctgaaggtgtttgagctgctcaca
aacagctgccagatcctctacggacacacagatactgtcctctcattggacgtgttcaaa
aagggttttgtctttgcaagctgtgcgaaggacaggtcagtgcgtgtgtggcagatggac
agtgacagtggtcaggtgcactgtgtggcccagggctccagccacactaatgctgtgggc
tccatcgcctgctccaggatgaaagcatcgttcatagtgtctggcagtcaggactgtact
gtgaaggtgtgggatctgccagcagacttgtctacggcaggagctgatgaaaatcagctg
accgcccgcgccacagagaaggcacatgataaggatgtaaacagcgtagcggtgtcaccc
aacgacaaactgctggcttccggctcacaggaccgcacggccaagctgtggtcgttggcg
ggggaggggagagtgggcctgctgggggtgtttaggggccaccgtcgcggtgtctgggcc
gtctgcttctctcccgtcgaccaggtgttggccacgtcctctgcggacggcaccaccaaa
ctgtggagcctacaagacttcagctgcctcaagacattcgagggtcacgatgcatccgtg
ttgaaggtcgtctttgtgagccgaggcactcagctgctctccagtggctcagatggttta
gtaaagctgtggaccataaagaccaatgagtgtgtgaagacgctggacgcccaccaggac
aaagtgtggggtctccacgctacccgcaaagatgacaagatggtgaccggctcagcagac
tctaacatcactgtgtgggtggatgtgactgaggttgagctggcggaggagcaggccaag
caggaggatcagatactcaagcagcaggagttgtccaacctgctccatgagaagaagtat
ctgaaggccctgggtcttgccatctcactggaccagcctcacactgtgctcagtgtgatc
aaagcgatccgtcagggggaggatagccgtgagctgttggaaaagatggtgctgaaactt
cgccaggatcagaaagagtcgatcctgcgctactgtgtggtgtggaataccaacgccaga
aactgccatgatgcccaggccgtcctacaggtgcttctcacacacctgccacccgaggag
ctgctgcagtaccagggcgcccgaacccacctcgagggactcatcccatacacagagaga
cacatgcagaggattggccatctgttgcaggcatccatgttcctgaactacatgtggcag
aacatgagagtggcgggagccccacccagcatgggccaagatgaagagatggataccact
cctcttgcacagcccttctttataattgacaaggagaaagggacagacaggggtgatgag
gacaaacgagatgaagacgacagcgaaggaggaggagaagaagaagaagaagaggacgac
gacgacgacgaagtcagtgtcagcaaaaaagcctccacctacaacggacgagtggaaaac
ggaaagaccaccaaaacaaatggcaaccacctctctgatagtgaggagagttcagaagag
gaagacgtggaagaagatgcaacggtaaaagtggtgaaacgcctcccagtttcttcaact
ccacaatgccagacttcaaccagctga

DBGET integrated database retrieval system