KEGG   Micropterus salmoides (largemouth bass): 119888870
Entry
119888870         CDS       T07309                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msam03041]
    119888870 (smu1a)
Spliceosome [BR:msam03041]
 Complex B
  Other components
   Complex B specific factors
    119888870 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML ANAPC4_WD40 LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Ge1_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_BBS7 Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F LisH TFIIIC_delta LisH_PAC1 VPS8_N PROPPIN zf_topless WD_LRWD1 DUF7165 LisH_WDR26 PA14 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 119888870
NCBI-ProteinID: XP_038555580
LinkDB
Position
Unknown
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHASFVNEATFTPD
GHHIISASSDGTVKVWNMKTTECSNTFKPLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctttggaggtggaatccgcagacgtgatccgtctgattatgcagtacttgaaggag
aataatctgcaccggactctggccacgctgcaggaggagaccacagtgtctctgaacact
gtggacagtatagagagctttgtggcagacataaacagcggccactgggatacagtcctg
caagccatccagtccctcaagctgccagataagaccctgatagacctttatgaacaggtg
gtgttagagctgatcgagctgagagagttgggtgcagcccgttcactcctcagacagacc
gaccctatgatcatgctgaaacagacgcagccagagagatacatccacctggagaacctg
ctggctcgctcttacttcgatcccagagaggcgtatccagatggcagcagtaaggagaag
cgccgggccgctatcgcccaggccctggccggggaggtcagtgtggtgccaccctctcgt
ctcatggctctgctgggacagtctctgaagtggcagcagcatcagggcctcctgcctcct
ggtatgactatcgacttgtttaggggtaaagctgccgttaaagatgtggaagaggagcgc
ttccccacccagctcgccagacacatcaagtttggacagaaatctcacgtggagtgttcc
agattctcccctgatggtcaatacctggtcactggttctgtggacggcttcatcgaggtc
tggaacttcaccactggcaaaatcagaaaggatctgaaataccaggctcaggataacttc
atgatgatggacgatgcagtgttgtgtatgtgcttcagtcgagacacagagatgttggcc
actggagcccaggatggaaaaatcaaggtgtggaagatccagagtggtcagtgtctgagg
aggtttgaacgtgcccacagtaaaggagtaacatgcgtcagtttctgtaaagacagcagc
cagctcctcagtgcctccttcgaccagaccatcagaatccatggactgaagtcgggtaaa
acccttaaggagttccgcggccacgcctcatttgtgaacgaggccaccttcactccagac
ggccaccacatcatcagtgcttcctcggacggtacagtcaaggtgtggaacatgaagacc
actgagtgctccaacaccttcaagcctctgggcacgtcagccggcaccgacatcacagtc
aacaacgtcatcctgctgcctaagaacccagagcactttgtagtgtgtaaccgctccaac
actgtggtcatcatgaatatgcagggacagatcgtgaggagtttcagctctggtaagagg
gaaggtggagactttgtgtgctgcactctgtcgccccgcggtgagtggatctactgcgtg
ggtgaggactttgtactctactgcttcagcaccgtcaccggcaagctggagagaacgctt
acggtccatgagaaggatgtaatcggcatcgcccaccacccccaccagaacctcatcagc
acctacagtgaggatggtctgctgaaactctggaagccttga

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