Micropterus salmoides (largemouth bass): 119888905 Help Entry 119888905         CDS       T07309                                  Symbol pcdh1b Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism msam  Micropterus salmoides (largemouth bass) Pathway msam03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:msam00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     119888905 (pcdh1b)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:msam01009]     119888905 (pcdh1b)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:msam04515]     119888905 (pcdh1b) Protein phosphatases and associated proteins [BR:msam01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      119888905 (pcdh1b) Cell adhesion molecules [BR:msam04515]  Cadherins   Protocadherins    119888905 (pcdh1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th Fibulin_C PDGLE Motif Other DBs NCBI-GeneID:  119888905 NCBI-ProteinID:  XP_038555616 LinkDB All DBs Position Unknown AA seq 1212 aa AA seqDB search MAALRWEVLLFLAVVLLVSCGAAPTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGDKCFLEFEVSITDMVKGISNGPRL IEGRIEVLDINDNTPQFSSPILSLSIPENMHVGALFAIPMATDRDSGTNGVAEYSLSTGP DADQLFSLQVAVDTDEKLPQLVVMGNLDREKKESYDLNIRVVDGGKPPRASSALLRVTVT DQNDNAPKFERSHYEAELPENSPLGHSVLQVRANDADTGNNGEIDYSLHQASETVQRLLR IDRSTGIIYVKGLVDREEENFLKFFVVAKDRGPNSKSSKVLVTINVRDQNDNAPAIEIRG IGLVIHQDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND RKRKYFLQTTTPLDYERVKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNTPNFSPALL EVDFPEGNQPGDMVLGVTATDADSGTNAELAYSIIELSATRLFEIDSNTGDIRVKNLLDR EETDRYEFRVAAADKGVPSKTGTATVVINVLDRNDNDPKFMLSGYSFSVNENMAPLNPVG VVTVTDADKGENARVRLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGD PPRSSYVGVTINVLDENDNSPYVTKPANSSYTYMSPVTPPDTRVEVVEAEDIDSGPNAEL SYTITGGNPYGLFHISPNSGEITLAQEFTGKHNGLHRLVIKVSDKGKPARHTTALVHVFV NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVV IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK GLKFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSKQLPHRRVTFSTANQAQDLQDASQ HSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVA MTGNCTHECTEFGHSDSCWMPGEPSPNRKVPKNAPKLSTFVPYQEIDGQEQLMANGSPKP LTMEERGTGSGGGSSSKVANMRFMTPYSSAYPGGGDSSGKDCGLEEIPLSQAVEYHSATT PTGQTSKREIYL NT seq 3639 nt NT seq  +upstreamnt  +downstreamnt atggcggcgctgagatgggaggtcctgctgttcctggcagtcgttctgctggtctcctgc ggcgctgcgcccaccgacatcctgtatcgagttcctgaggaacagccacccaacacgctg atcggtagcctggcggcggaccagggcctgcctgacactggccacctctacaagctggag gtgggctcgccgtacctgcgggtcgacggcaagaccggcgacatctacaccaccgagatc cccatcgaccgcgagacgctgagggactgccgcaacctgtttgagggcgacaaatgcttc ctggagtttgaggtgtcgatcacagacatggtgaaaggcatcagcaacgggccgcggctg atcgagggccggattgaggtgctggacatcaacgacaacacgccgcagttctcctcgccc attctcagcttgtccatcccagagaacatgcatgtcggcgccctcttcgccatccccatg gccaccgacagggactccggcactaacggcgtggccgagtactcgctgagcaccggtccg gacgccgaccagctcttcagcctgcaggtcgctgtggacacggacgagaagctgcctcaa ctagtcgtcatgggcaacctggaccgtgagaagaaggaatcgtacgacctgaacatccgg gtggtggatggcgggaagccgccgagggcgagcagcgctttgctgcgggtcacagtcacc gaccagaacgacaacgctcccaagtttgagaggagtcactacgaggccgaactgccagag aacagtccgctgggtcactctgtgctgcaggtcagagccaatgacgcagacactggcaac aacggagagatcgactacagcctccatcaggcgtcggagactgtccagaggcttctgcgc attgaccgttctacaggcatcatctacgtcaagggcctggtggaccgtgaagaggagaac ttcctcaagttctttgtggtcgccaaagatcgtggacccaactccaagagctccaaagta ctggtgaccatcaacgtcagggaccagaatgataatgcaccggccattgagatccgtggt atcggcctggtgatacaccaggacggcgtggccaacatatctgaggacatgcccattggc acgccggtggcattggtccaggtgtcagaccgtgatgagggggaaaatgcggtggtgaca tgcgtggttgccggtgacgtcccatttcagctgcgacctgcgagtgagtcagccaacgat cggaagaggaaatacttcttgcagacaactaccccgctggattatgagcgtgtcaaggat tacaggattgaaatcgttgctgtggattctgggaacccagccctgtctagcaccaactcc ctcaaagtccaggtcacggacatgaacgacaacacgccgaacttttcccccgcgttgctc gaggtagactttccagaaggcaaccagccaggtgacatggtgctgggcgtcacagcgaca gacgcagacagtggcaccaacgcagagctggcctatagcatcatcgagctctcggccacc aggctgttcgaaatcgattccaacactggagacattcgtgtgaagaacctgctggatcgg gaagaaactgatcgttatgagttccgtgtggcggcagcagacaagggtgttcctagcaaa actggcactgcaacggtggtgattaatgttctggaccgcaatgacaacgaccctaagttc atgctaagcggctacagcttctctgtcaacgagaacatggctccgctcaatcctgttggc gttgtgaccgtcaccgatgccgataaaggtgagaacgcccgcgtgaggctgtttgtggaa ccggacaatggcaagtttgtaatccagaacggcactggaaccatcctgtccagcatctcc ttcgaccgcgagaaggagagcacctacacattccgtctgaaggccgtggatgctggtgac ccacctcgatcctcctatgtgggtgtgaccatcaatgtcctggacgagaatgataactcc ccctatgtcaccaaaccagctaactcctcctacacatacatgtcacctgtcaccccgcca gacacccgtgtggaagtggtcgaggctgaggacattgactccggacccaatgctgagctg tcctacaccatcacaggaggcaacccgtatggcctgttccacatctctcccaacagcggg gaaatcacactggcgcaggaattcaccggcaagcacaatggcctgcaccgcctggtaata aaggtcagcgataaaggcaaaccggcccgccacaccaccgccctagtccacgtttttgtc aatgacaccaagtccaatgtgtccctcattgaagcgctggtgggacacagcctctacacc cctctggacagggacattgccggagatcccaactacgcccttgctcagcgcagcaacatc ctgtacggcagcctcgcgggtattgctggtgtgattctggtcattgtggctgtggtggtc atcagacaccgactgcagaaggacaccaagagcggctaccaggctggcaagaaggagagc aaggacctgtacgctcccaagcagggccccaaaaatggcaaagggaaaaagagcaaaaaa ggaaaagctccgaaaccggccaagccactggaggaagacgaggaggccagcctgcagaag ggcctcaagttcaacctcatcaacgacaacgtcaacgacagtcccagaatccacctgccc cttaactacccgccgggaagccccgacctgggccgccactaccgctccaactccccccta ccctccatccagctgcagccacagtcaccctccgcctccaagaagcaccaggccgttcag gacctccccgccaccaacaccttcgtgggaacgggcgacaacaactccacaggctcagac caatattcggattacagctacaaggccaacccgcccaaatacagcagcaaacagctcccc caccgccgagtgaccttctccacggccaatcaggcgcaggacctgcaggacgcgtcccag cacagctactacgacagcggcctggaggagtcggagacgcccagctccaagtcgtcgtca gggccgcggatcgggccgctggcgctcccggaggaccactacgagcgcaccacgcctgat ggcagcatcggcgagatggagcacccggagaacgacctcaggcctcttcccgacgtggcg atgaccggtaactgcacacacgagtgcaccgagtttggccactccgactcctgctggatg cccggcgagccttcccccaaccgcaaggtgcccaagaacgcccccaagctctccaccttt gtgccttaccaggagatagacgggcaagagcagctgatggccaacggcagccccaagccc ctgacaatggaggagcgcgggacgggcagtggcggcggcagcagttccaaagtggccaac atgcggttcatgacgccttacagcagtgcctaccctgggggcggagactcgtctggcaaa gactgtgggctggaggagatcccgctgagccaggcggtggagtaccactcggccaccact ccgaccggccagacctccaagagggagatctacctgtga

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