Micropterus salmoides (largemouth bass): 119889020
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Entry
119889020 CDS
T07309
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119889020 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119889020 (atrx)
03036 Chromosome and associated proteins [BR:
msam03036
]
119889020 (atrx)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119889020 (atrx)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119889020 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119889020
NCBI-ProteinID:
XP_038555792
LinkDB
All DBs
Position
Unknown
AA seq
2071 aa
AA seq
DB search
MSLPSESNLDQMAEKADEPVISTETMKPSSSRNKRKPATVAKHTGLNESDASDESENEGA
NSDNPSDNNTGSVSKGTLVMRPVGNENKGAMKLRVDFKQKHTDDTLQKKINCTACGKQVN
QFQRNSVFEHPVLKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNAF
CKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQDLISKCHSIMEKQELAQHKQRKPDK
TEERESKTHKNKAVKEHKAVVNGKEHIEGSGTMTFSYKKLQIPKELIKKTKKLVETTTGL
NNTFIQFIQQAAEDQGDKSIRYRHLKAFKAVLADLKKAHSALEVALEPEFRNMDLQNGNE
GQHIVRKSPDVLVPVENDHVDKMVDAVDEADAAEELDLEPEGELDGEQDGELGVEQDGEP
EGKPDSEQDGEPEGKLERELDGEPDGELVEEQHNEQDVDTDQLPDATELKDSQTETDVTK
KTIKTEVCDDGLVSAGEMSLDRDIMSVPPSVPEELFQMVESLADSTMLSQADTDLVTDTN
TKSNANSTDTQRPHPKVKNLIVKLTPVPVVTTCGSRSSRSKNKEKDEETVKKCKEECKEK
KNDDDAAAEKVDGRHSPPPSRRSSRVKTTPLRKQTENKGKEETSESESEEDGKGKVKSSK
KSRNTKKEDRKRTKATEKKTLDSDSDEVPNILLEKAAAGHSTDEEQGSTSAKKCLFKLNN
TSTQNTEKVKRKRKSESSDSDSENKSKKTSKKKKMNGSDSPNSDSDQEKETKGEVGTAKR
RSSRVKKQNEAKEDDKNSPERKAAERRRSYEKKRKGRSSKSTSKLQSSSSEDEEEQQAEG
DSGEDSDAQKIKPIVEDNVVGAGGPFHQSSGDEGDDKERVSRVCEDDDDDDPENRIAKKM
LLAQIKSNYSSGAESSSENEEAEKDEKSSKKVKDEDEEEQQDEDSEDSSSDVEVKKRGRR
HKLLRHKLSLSEGESGDEKAASKEKNKGGKKKSGQKVSSDDSSDSDYDKSDKSESSAESG
ISEELSESENEGKRRKTRAANKKDEEKQRSYKQKKKRRRIKVQDSSSSNEKSGEEDGDGN
EDGEDRKGRKKLRKILKDDKLRTETRDALKEEEERRKRIAEREAFREKLREVIVVKESSE
VICPITTKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIEKSAGS
GCILAHCMGLGKTLQVVTFLHTLLLCEKLEFTTALVVCPLNTVLNWLNEFEKWQEGMKDD
ESLEVIELATVKRPQERAYALQRWQEMGGVMIIGYEMYRNLTQGRNIKSKKLKETFQKTL
VDPGPDIVICDEGHILKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLVEYHCMVNFIKEN
LLGSIKEFRNRFINPIQNGQCADSTLHDVRIMKKRAHILYEMLAGCVQRKDYTALTKFLP
PKHEYVLSIRITPIQCKLYRYYLEHFTGVGNAMEGGRGRAGTKLFQDFQMLSRIWTHPWC
LQLDYISKENRGFFDEDSMDEFIASETEESSMSMTSEDEKIKKKKKQGKGKKKGSDDSDS
DDVEVIKEWNTSSRGRNGEGRKREEPVEEPQPTGSAPGSPTPDWHKEFVTEADAEILEHS
GKMVLLFEILRMAEEVDEKVLVFSQSLISLDLIEDFLELACRAKDEEKISPYKGEGKWFR
NIDYYRLDGSTNATTRKKWAEEFNDTSNTRGRLFLISTRAGSLGINLVAANRVIIFDASW
NPSYDVQSIFRVYRFGQIRTVYVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHF
TTNELAELYTFEPDMLDDPSEKKSKKATPLLPKDPFLAEMLQNNKDQIVCYHEHDSLLDH
KEEEALSEEDRKAAWAEYEAEKKGLSMRTNYQTTYSQMDMGGSNYFSYNVAALASMTNQQ
LEDLINQGRQKVIEATNALKTLARESLEDTIGRVWKENPSLTENQVQSIALGRQASVELE
VKRREAVYRDVLTRQQTLMMFVQKLITNRKVQEQQLAMANQANYLNQLALQNGMMGGSGL
SQMDLLGLYQQLHGLGSHQGMGKNPGPSKGL
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgccttctgaatcaaacctcgaccaaatggcagaaaaagcagacgaacctgtt
atctcaacagaaactatgaagccctcttcttcacgcaacaagaggaagcccgctactgta
gctaagcacactggactgaatgaatccgacgcctctgatgagagtgaaaatgaaggtgcc
aattctgacaatccttcagacaataacacaggcagcgtatctaaaggcactttagtgatg
aggccagttggaaatgaaaataaaggcgccatgaagctcagagtggatttcaaacagaaa
catacagatgataccctgcagaagaagataaactgcactgcttgtggaaaacaagtgaac
cagtttcagcgcaactctgtgtttgagcatcctgtgctcaaagtacttatttgcaagtca
tgctacaagtattacacaagtgatgacatcaacagagactccgatgggatggatgagcag
tgcaggtggtgtgctgaaggtggcaagctcatctgctgtgactactgcaacaatgccttc
tgcaagaagtgcatcctgcgcaacctgggcaggaaggagctgtcagtcattactgatgag
aactcaaagtggcactgctatgtctgtaggtcagagcccctccaggacctgatctccaaa
tgccacagcatcatggaaaaacaagaacttgcgcaacacaagcaacgaaaaccagataaa
actgaggaacgtgagagcaagacccacaagaacaaagcagtcaaagagcacaaagcagtt
gtcaatggaaaagaacacatcgaaggctcagggaccatgacattctcctacaaaaaactg
cagatacccaaagaacttataaagaaaacaaaaaagcttgttgaaactacaactggtctg
aataataccttcatccagtttatccagcaggcagccgaggaccagggagataagtctatc
aggtatcggcatttgaaagcctttaaggccgtgcttgccgatttgaaaaaagcccatagt
gctttggaggtggctttggagcccgagttcagaaacatggatttgcagaatggtaacgaa
ggacaacatattgtgagaaagagccctgatgttttggtgcctgtagaaaatgaccatgtg
gataaaatggtggatgcagttgatgaggctgacgcagcagaggagctggacctggagccg
gaaggggagctagacggggagcaggatggggagctgggtgtggagcaggacggggaacca
gagggtaagccagacagtgagcaggacggggaaccggagggaaagttggagagggagctg
gacggggagccggatggggagctggtagaggaacagcataatgagcaagacgtggacact
gatcaattgccagatgcgactgaattgaaggacagccaaacggaaactgatgtgaccaaa
aagacaattaaaactgaagtctgtgatgatgggctggtgtcagctggtgaaatgtccttg
gatcgtgacattatgtctgtccctccttcggttcctgaagagctttttcagatggtggag
agtcttgcggattccaccatgctctcacaggctgacaccgatttggtcacagacaccaat
acaaagtcaaatgcaaactcaacagacactcaacgccctcatcccaaggtgaagaacctc
atagtcaaactgactcctgtgccagtcgtgacaacatgtgggtcaaggtcttccaggtcc
aaaaacaaagaaaaagatgaagagacggtgaagaagtgtaaagaagaatgcaaagagaag
aaaaatgatgatgatgctgctgctgaaaaagtagatgggagacacagcccaccacccagc
cgtcgctcgagtagagtgaagaccactcctttgaggaagcagacagagaacaagggcaag
gaagagacctctgagtcggagtcagaagaagatggtaaaggcaaagtcaaatcctccaag
aaatcaaggaacaccaaaaaagaggatcggaaacggaccaaggctacagagaaaaagacg
ttggattctgactcagacgaagttccaaacatactgctagagaaagctgcagcaggccac
agcacagatgaggaacagggaagcacaagtgctaaaaagtgtttattcaaactaaacaac
acatccacacagaacacagagaaagtaaaacgcaaaaggaagtctgaaagctctgattca
gactcggagaacaaaagtaaaaagacgtccaagaaaaagaaaatgaatggttcagactct
cccaactctgactctgaccaggagaaggagacaaagggtgaagtgggcacagcaaagagg
agatctagccgtgtgaagaaacaaaatgaagcaaaagaggatgacaaaaactctcctgag
aggaaggcagccgagaggagaaggtcttatgaaaaaaagcgtaagggaaggagctccaaa
tcgacctccaagctgcagtcatcctccagtgaggatgaggaggagcagcaggctgaaggt
gattctggagaggacagcgacgcacaaaagatcaaacctattgtggaggataacgtagtg
ggagctggcggacctttccatcagtcctcaggagacgaaggggatgataaagagagagtc
tctcgggtttgtgaagatgatgacgacgatgatcctgaaaacaggattgcaaagaaaatg
cttctcgcccaaataaaatcaaactactcttctggagcagagagctcttctgaaaacgaa
gaagcagaaaaggacgaaaagtcctccaagaaagtaaaagatgaggatgaagaagagcag
caagacgaggattcagaagactcgagttctgatgtagaagtgaagaagcgtggcagacgc
cacaaattgcttcgccataaactttcgctgagtgagggtgaatcaggagatgagaaagct
gccagtaaagagaagaacaaggggggcaagaagaagtcagggcagaaagtgagcagtgat
gactcgtcagactctgactatgataagtcagataagtcggagtccagtgcagagtcgggg
ataagcgaggagcttagtgaatcagagaatgaggggaagcgtcgaaagaccagagcggcg
aacaagaaggatgaggagaaacagagaagttacaagcagaagaagaaacgacgcaggatc
aaagttcaggattcctcttccagcaatgagaagagcggagaagaagatggtgacggcaac
gaagatggtgaagaccgcaaaggacgcaaaaagctccgcaaaatcctgaaggacgacaag
ctgcggacagagacgagggatgctctgaaggaagaggaggagaggaggaaacgcatagca
gagagggaagcattcagggagaaacttcgagaggtgattgtggtgaaggagtcttctgag
gtcatctgtcccatcaccaccaagctggtgctggatgaggatgaagagaccaaggagccg
ttagtgcaggtgcacaggaacctcgtcacaaagctcaaacctcaccaggttgacggggtg
cagttcatgtgggactgctgctgtgaatctgtgaagaagattgagaagtctgctggctcc
ggctgtatcctcgcccactgtatgggcctgggaaagactctgcaggtggtgacattcctt
cacactttgctgctttgtgagaagcttgagttcaccacagctctggtggtatgtcccctg
aacactgtccttaattggctcaatgagtttgagaagtggcaagaaggaatgaaggatgac
gagagtttagaggtgattgagctggccacagtaaagagaccacaggagcgagcatacgcc
ctccagcggtggcaagagatggggggtgttatgattatcggctatgagatgtaccggaac
ctgacgcagggcaggaacatcaagagcaagaagctcaaagagacctttcagaagacactg
gtagatccaggtccagacatagtaatctgtgatgaaggtcacatcctgaagaacgaggcg
tctgctgtgtccaaagcgatgaattctatcaggacgaggaggagggttgtgctgactgga
acgcctctgcaaaacaaccttgtagaataccattgcatggtgaacttcatcaaggagaac
ctgcttgggtcaattaaggagttcaggaatcgcttcataaaccccatccagaatggtcag
tgtgccgactccacattacacgatgtccggatcatgaagaagagggctcacatcctgtat
gagatgctggccggctgtgttcagaggaaagattatacagcgctcaccaagttcctgcct
cccaaacacgagtatgtgttgtcgatcagaattactccaatccagtgtaaactctacaga
tactacctggagcacttcacaggtgtggggaatgctatggaggggggccggggccgtgcg
gggaccaaactcttccaggatttccagatgctcagcagaatctggacccatccctggtgc
cttcagctggactacatcagtaaagaaaacaggggtttctttgatgaggacagtatggac
gagttcatcgcttcagaaaccgaagaatcctccatgagtatgacctctgaggacgagaag
ataaaaaagaaaaagaagcaagggaagggaaaaaagaagggatctgatgactcggacagt
gatgacgtggaggtcatcaaggagtggaacacgagctctcgaggcagaaacggagagggt
cgaaaaagagaagagcctgtggaggaacctcagcccactggctcagcaccagggagtccc
actcctgactggcacaaggagtttgtcactgaggctgacgctgagatcctggagcactct
ggaaagatggtgctcctcttcgagatcctgcgcatggcggaggaagtagatgagaaagtg
ttggtgttcagccagtctctcatctctctggacctgattgaggatttcctggagctggct
tgcagagctaaagatgaagaaaaaatctctccatacaaaggtgaaggcaagtggttcagg
aacatcgactactatcgcctggatggctccaccaacgccaccaccaggaagaagtgggca
gaagagtttaacgacaccagtaacacaagaggtcgtttgttcctcatctcaactcgagcc
ggctctcttggcatcaacctggtggcagccaacagggtcatcatctttgacgcctcctgg
aacccctcctacgacgtccagagtatcttcagggtctatcgctttggccagattaggacc
gtttatgtttacaggttcttggcccagggtacaatggaggagaagatttatgaccgacag
gtaaccaagcagtctctgtcgttccgagtggtggaccagcagcagattgaaaggcacttt
acgacaaacgagctggctgagctatacacctttgagccagacatgctggatgacccctca
gagaagaagagtaagaaagccacgcccttgctccctaaggatcccttccttgccgagatg
ctgcagaacaataaggaccagattgtgtgttaccatgagcacgactccctgctggaccac
aaggaggaggaagccctgagtgaggaggatcgcaaggctgcctgggctgagtatgaagca
gagaaaaagggtctgtcaatgaggaccaactaccagacgacatactctcagatggatatg
ggcggctccaactacttctcctacaacgtggccgctttggcctccatgaccaaccagcag
ctggaggacctgataaaccagggacgacagaaagtcattgaagcaacaaatgcactgaag
actttagcacgcgagtcactggaagatactatcggcagagtgtggaaggagaacccgtcc
ctcacggagaatcaggtccagtctattgctctgggtcgacaggccagtgttgagctggag
gtcaagcgcagggaagccgtgtacagggacgttctcaccaggcagcagacgctgatgatg
ttcgttcagaagctgatcaccaacaggaaggtgcaggagcagcagctggccatggcgaac
caggccaactacctgaaccagctagccctgcagaacggcatgatgggaggcagcgggctc
agccagatggacctgctgggcctttaccagcagctccacggcctgggctcccatcaaggc
atgggcaagaatcctggaccctccaagggcctgtag
DBGET
integrated database retrieval system