KEGG   Micropterus salmoides (largemouth bass): 119889395
Entry
119889395         CDS       T07309                                 
Name
(RefSeq) WD repeat-containing protein 18-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msam03009]
    119889395
Ribosome biogenesis [BR:msam03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    119889395
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_DCAF12 Ge1_WD40 Beta-prop_Nup120_160 WDR54 KNTC1_N Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 119889395
NCBI-ProteinID: XP_038556251
LinkDB
Position
Unknown
AA seq 430 aa
MAAPLEVIVSSDSGSQLWNSTVFDLHSGSSLLSYRGGNSAARTLTVLSGQYLLSAQVAKN
FINVWEIQRKDQLQQKIVCPGVVTCLTASPNGLFLTAAIAEAIYLWEVSTGKLLCVLSRH
YQDVTCLKFTDDSSHFVSGGKDNMALVWSLSSAIQLDLSHTPEPRHILSRHSLPITDLHC
GLMGAQARIATASLDQTVKVWELSSGELLLSVLFDVEIMSVTFDPSEYFLFCGGSDGNIF
QVSLCSQSLSRDKSFQSDNDGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETVRLWDVQS
KQSIRCLAHKGPVTNAIIMAAPANMFLPDSRPAIPLPRFSRHLHASEGDGGESGEVCVRL
GPYTQEEEETYLQKADRLNSLMNAVTDKSVFGDGENTKVRVAELEEEVQTLKKVNKDLYD
FSSQLLTKPT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcggctcctctggaagtgatagtgagcagcgactccgggtctcagctctggaacagc
accgtgttcgacctgcacagcggctccagcctgctgtcttaccggggagggaacagcgcg
gcccggacactgaccgtcctcagcgggcagtacctgctgtccgcccaggtggccaagaac
ttcatcaacgtgtgggaaatccagaggaaggatcagctgcagcagaagatcgtgtgtcca
ggtgtggtcacctgtctgaccgcctcacctaacgggctcttcctcactgccgccatcgct
gaggccatttatctgtgggaggtgtcgacaggtaagctgctgtgtgtcctcagtcgtcat
tatcaggatgtcacctgtctgaagttcacagatgacagcagccattttgtctctggagga
aaagacaacatggctctggtgtggagcctgtccagtgctatccagctggatctaagccac
acccctgagccgcggcacatcctttctcgtcactctctgccaatcacagacctgcactgt
ggcctgatgggagctcaggccagaatagccaccgcctccttagaccaaaccgtcaaggtg
tgggagttgtcctctggcgagctgctgctgtccgtcctgtttgacgtggagatcatgtcg
gtgacctttgaccccagcgagtacttcctgttctgtggaggcagcgacggaaacattttc
caggtgtctctgtgcagccagagtctcagtcgggacaaatccttccagtccgacaacgat
gggaaccaggtcttcaaaggacacaggaacctggtgacgtgtctctcggtgtcgatggac
gggactctccttctctctgggtcgcatgatgagacggttcgactctgggacgtccaaagc
aaacagagcatccgctgcctcgctcacaaaggtccggtgacgaacgccatcatcatggcg
gctcctgctaacatgttcctgcccgacagtcggcctgccatccctctgccacgcttcagc
cgacacctgcacgcctccgagggcgacgggggcgagtcaggagaggtgtgcgtccgactc
ggaccctacactcaggaggaggaggagacgtacctgcagaaagctgaccggctgaactcg
ctgatgaacgctgtgactgacaagtcggtgttcggtgacggcgagaacacgaaggttcga
gtcgcagagctcgaagaagaagttcagacgctgaagaaggtcaacaaagatctgtacgac
ttctccagccagctgctcaccaagcccacatag

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