Micropterus salmoides (largemouth bass): 119889703
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Entry
119889703 CDS
T07309
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119889703
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119889703
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119889703
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119889703
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Protocadherins
119889703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119889703
NCBI-ProteinID:
XP_038556426
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MFNSRHPSLSKRGGLWGLCIILLYSSPLSCFAKFSHAKELIYKIKEGLTRGTFIGAIGVD
LNLDFTVEPPFLFSLPQKKVSEQYVKLNNTTGELYTSATEIDRETLCPDNAERQGCVLSL
DVFVLPQQYFQLIKVKIVIEDVNDNRPKFPVDVICMSVPENTPINARYAVEQSAVDPDLG
LHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFRESQINVTLHGNTTKGAHLAHLHAFDPDLGANAQISYAYS
ERVPRDTRSLFHLDRITGVIKLAGKIDTGTSTFYKLTILANGPGCIPAVATVIVHIIKVV
TGPPAIIPRYIAPEKDGVVAIKESEPAFSPIAFFTVKNIDMNQRVDCHLEGTGPFRLGPY
QLFKNEYLLETTEPLDYEKTQEYELIVVAKNTRELVIKTFLKVQVLDENDNAPVFQQSLV
KISVEENNPPNTFLAQLQATDQDSESRGEVIYLLGGDAPGIFVVNRLTGILTVTTSLDRE
EKETYRFIVRAVDQGTPRRESIATVVLTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAIDGGEP
ALSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVTDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREADIEIEERPWYIGQMTEGPERYELFPCQPVLIALSVTCLGLF
FSVVTLTSYICCKRIKKHRKKRLEVDIPLKIKNDSMQVVNNKRRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcagacaccccagccttagcaaaagaggaggactatggggattgtgcatc
atcttgctttactccagccctctttcctgttttgcaaaattcagccatgcaaaagagctc
atctataagataaaggagggattaaccagggggaccttcattggggccattggagtagac
ttaaatttggatttcactgttgaacccccctttttattcagtcttccacaaaagaaggtc
agtgaacagtatgtgaagctaaataataccaccggtgagctttacacatctgctacagag
attgacagggagaccctctgtcctgataacgctgagcgacagggatgtgtcctctcactg
gatgtgtttgttttgccccagcaatactttcagctcatcaaagttaagatcgttattgaa
gatgtgaatgacaacaggccaaagttcccagtggatgtgatctgcatgtcagtcccagaa
aacacacccatcaatgctcgttatgcggtggagcagtctgcagttgacccggacctgggt
cttcacggagtacagacctactggcttgttaatgattttggcatgttcacactggatgtt
gaggagaatgagggaggtgagctgacacccttcctcattgtgactgaggctttggacaga
gagacccaggccgaatacattacagatatcattgcagaggatggagggacccctcctcta
ctcggagcggctactttaaaaattgttatcacagatgtgaacgataactgcccccaattc
agagagtcacaaatcaatgtcactctgcatgggaataccacaaaaggggcacatttggca
catctgcatgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgtgtgccaagggacaccagaagcttgttccatttggacagaatcacaggggtgatc
aagctagcagggaaaatagacactggaacatccacgttttacaaactcactattctggcc
aatggacctggttgtatccctgctgttgccactgttattgtccatatcatcaaagttgtt
acaggaccccctgctatcataccccggtatattgcaccagaaaaggatggggtggtggca
ataaaggagtctgagccagcgttttctccaatagctttttttacagtcaaaaacattgat
atgaaccaaagggtggactgtcatttggaagggactggtcccttcaggcttggcccctat
cagctattcaagaatgaatacctgctagagactacagagcccttggactatgagaagaca
caggagtatgagctaattgtggttgctaagaatactcgagagcttgtcatcaagaccttc
ctcaaggtgcaggtattggatgagaatgataacgcaccagtgtttcaacagtctttggtg
aaaatatctgtagaggagaacaatccgccaaatacctttctggcccagctccaagccaca
gaccaggacagtgaaagtcgaggggaagtgatctacctccttggaggtgacgccccaggg
atctttgttgtgaatcgcttgacaggtatcctgacagtaaccacatcgctagaccgggag
gagaaagagacataccggtttatagtaagagcggtggaccaggggacacccaggagggag
tcgattgcaactgtggtgttgaccgtgcaagaccgcaatgacaacagtccacgcttcatc
aataaggacttcacattctttgtgccagagaacttcccagggtacggtgagatcggggtc
ctctctgtgacagatgctgatgctggggaaaatggttgggtggccctttccatcctcaat
ggcagcgacatcttcatgattgacacaggccgtggggcgctgagggccaagacatcactg
gaccgtgagcaacaagggacataccagctctggattgaggccattgatggtggggagcct
gcgctttcctgtgttactatggtgaccgtgcttttgttggatgtaaatgacaacccacct
attgtcctctttcctcagtccaatcagtcttacatgctagtactacccagtacactacca
ggaacatcaatcacagaggtctatgctgtggacaaggacacaggcatgaatgctgtgatc
gcctatagtatcatcaagaggaaaggtggtgagccagggtcatttgccattgacccagaa
acaggaaatatcacattaaagagggagctcagcaaccggggcctctacagccttctggtg
aaggtcacagatcatggtcagcctgaaccgctttactcaacagtaatggttaacttcttt
gtcaatgaaacagtgagcaacgagagctacatccagagtctgctgaccagagaagctgac
attgagatagaggagaggccctggtacattggccagatgacagaggggcctgagaggtat
gagttgttcccctgtcagcctgtcctcattgctctctcagtgacatgtctggggctgttc
ttctcagttgttactctgacatcttacatatgctgtaagagaattaaaaagcacagaaag
aaaagattagaagtggatatacctttaaaaatcaagaatgactcaatgcaggtagttaac
aataagcgcaggcagatctcaaacatctga
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