Micropterus salmoides (largemouth bass): 119889875
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Entry
119889875 CDS
T07309
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119889875
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119889875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119889875
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
119889875
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119889875
Multi subunit type E3
ERAD complex
119889875
LMBR1L-GP78-UBAC2 complex
119889875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-RING_Vps41
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
119889875
NCBI-ProteinID:
XP_038556701
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVIDPGFAALETDETPAPSETDLEHL
NYSNTELATRVLRYLVADSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKDKF
WNFIFYKFIFIFGVLNVQTVDEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPMNS
HVRVLCLLVSLLLDCCGLAVVCGLLGASNGMHTLSFMAAECLLVTVRTGHVIMRYSIHLW
DLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLF
HEVQRRIRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDTMLTARKLPCGHLFHN
SCLRSWLEQDTSCPTCRTSLNINGDGGQVRGQQPAGGMEDNIGPVGAAADARPHINQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVMQDL
QLTRSVEVTTDNILEGRIQVPFPTQAIERAPTPVSSAPDELDGPSGAAEQGLSESDSMEV
RGGRFSKSAEERQKMLKQRKEELLQQARRRYLNKSPEDQDEDLPGLEEDILPELNLTVLR
RRTMAAAAERRMQNQQDPAP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttctgtttttggagaggtttccttggcccagcctgcagacctatacagcactg
agtgtggctttgcttgctggcagcatctttagtgcctacaccactgtgattgacccgggg
tttgcggccttggaaaccgatgaaacaccagctccctctgaaacggatctcgaacatcta
aattatagtaacacagaactggcgacccgtgtcttgcggtatctggtcgctgacagtctc
tttgtatgggtcttagtcaacaccttctgctgctccttgatgttaattgcaaaaatgatt
cagtatgtggtgtttggtccgcttagagtcagtgagaagcagcacctgaaagataaattc
tggaacttcatcttctacaagttcattttcatcttcggtgtattgaacgtgcagaccgtg
gatgaggtggtcatgtggtgtttgtggttctctgccctggtctttcttcatctcatggtg
cagctctgtaaagacagatttgaatatctgtctttctctccctccactcccatgaacagc
catgtgcgtgtgctttgtctgctggtctccctgctgctggactgctgtggcctggctgtg
gtctgcggtctgctgggagcttccaatggcatgcacaccctctcctttatggcagcagag
tgtctgctggtgactgtacgtactgggcatgtcatcatgcgttactcaattcatctgtgg
gatctgaaccatccagggacctgggagagtaagggaacatatgtctactacacagacttc
atcatggagttggctatgctctttctcgacctcatgcaccatatccatatgctgcttttt
ggcaacatctggctgtccatggcaagcttggttatctttatgcagctacggtatctcttc
catgaagtccagcgccgcatccgcaggcacaagaactatcttcgtgtcatcaataacatg
gaggccagatttgctgttgctactgcagaggagctggcagctaatgatgatgactgtgcc
atctgctgggacaccatgttgacagcacgcaagctaccttgcggccatctcttccacaac
tcttgtttgcgctcgtggcttgagcaggacacatcttgtccaacgtgtcggacatccctg
aacattaatggggacgggggccaggtgagaggccagcagccggccggtggtatggaagac
aacattggcccagtaggagctgctgcagatgctagaccacatatcaaccaacacaatcat
ttcttccactttgatggttctcgcattgccagctggctgcccagtttctcagtggaagta
atgcacaccaccaatatcttgggcatcgctcaggccaacaactcccagctcatggccatg
gcccatcagatccaggagatgttccctcaggtgccctcctacctggtgatgcaggacctg
cagttgacccgctctgtggaggtcaccactgacaacatcctggagggacgcatacaggtg
cctttcccaacacaggccatagagcgtgcccctacaccggtgagctctgcaccagacgag
ctggacggccccagtggagcagctgaacagggcctcagtgagtcagacagcatggaggtc
aggggaggtcgcttctctaagtcggccgaggagaggcagaagatgttaaagcagaggaaa
gaagagttgctccagcaggctcgcaggagatatctaaacaagagtccagaggaccaggat
gaggatttgcctggactggaggaggacattcttccagaattgaacttgacggtgctgaga
cgtagaaccatggcggcagctgcagagagacgcatgcaaaatcaacaggacccggcaccc
tga
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