Micropterus salmoides (largemouth bass): 119889881
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Entry
119889881 CDS
T07309
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119889881
Membrane trafficking [BR:
msam04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119889881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
119889881
NCBI-ProteinID:
XP_038556709
LinkDB
All DBs
Position
Unknown
AA seq
1983 aa
AA seq
DB search
MLESAVRGSWWGWEMMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPIT
DVAVVVRSMGEEVPQGFTCIEETPTGHSADLNNGGLMAPQIYLCYRRGRDKPPLTDLGVL
YEWKERLKQGCHLIQTTPSGRPANISGNSSQRIYVTYRRAPESQPHTALAVTDICIIIPS
KGETPPHTFCKVEKNLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLP
ESVPLFCLPMGATIECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYETYPQECLTDQ
QLSQLGLLSPDPHKPSSSNTTLTATSSTTNSTTTPRSVYTNKCICLLSHWPFFDAFRKFL
TFLYRYSISGPHALPIEKHICHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLS
GGRFSTLLQNLGPENAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYI
PLCPLALADVLSAPCPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILP
KKACKNLMNVLSNLYQQLVDGQCRPDGLLELSMSDSSELSCGKSLHMLELEIQEAFLRFM
AAILKGYRSFLRPITQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIE
ECSFVSDKDASLAFFDDCVDKVDSDRPEETRLIEIDESQRSEHTVFITPPELPPLPEGEE
YPLCYRYDGFPVLSLDLFDPVEGLRTTSSRLAAKHSCPTSPAPMFRRTKQEIKSAQKIAK
KYSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPPDEV
CYRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLW
MKLRNVVVGVAQFKQALRRHAPLTQSPLSDGSDLDAVSHCSLDSSADTNLAEQGPYATDS
VKVDPTDDRSSTGDQSDLGYNSLSKEEVRRGDPSAPDSAPDKDDKKESDCSSLSETESAK
GSKDCLPQLDMEVHSSFKSRGIVRSSCPYDDSSCKPKGSASAGHVAGLLFTSSLDEIGGV
QANSLLRRHKSALEETVGSARNGSALDWLGVRDRQLSSDTVGSSGSGTTVLGLGMSQGET
DPDKIAGHLGADVKILSAANLGKNKRPQSLPLGALEGPAAKAGAARSRDHREEEEEGQDS
SDEDRSNTEAIFDLEDLDLDKPATGAGISSHKTNKSHKKPVERSASYSGMSTETSRGAVK
RTGIETGYDPLSLLAAESQSEQESEDQYPEGDDTSTQSARRHLAREIELYMNHLGSPLSS
RTPSLDLQDPASPLLLYPSSLSIPRRASLPHSSPLRTAGVPRSRTFHPPSPSQPISRQRL
CSSPACRSSSTTPSPSPRPSPYRERTDRMSLASPSPSSSSFALDTLLTPTLDVFKTSVFS
AGKGVAEKASRWYSRLATYTTPTKDGLSDRLSVSSLGVGDPDCSSLLDEEDCGESGSSVV
SPQRNGPAGPRRSPRRSPLRSRLDSPTAGSSLGGPTSLLPDKSDLGSSRYTSNTSIFNNY
AMELLISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGP
GRLFLKGSPSVDEAMTSSYSASTGLDTGTSTLSTPCPTTAVFPPSPVIAVQECSGSGRTR
AARAQGIDIPTDRRQGALSPGAHMARSVSAFVPLDEASRLNRCVPTSGSLPSRLNETADP
LSMEWRLHNPEPVTVPYLSPLVLWKELESLLENEGDPVITEADMVDHHPIIYWNLVWYFR
RLDLPSNLPGLILTSEHCNRDSQVPRHWMSEDSKHVLIQILWDNLKLHQDQIQPLYILWN
TYNVGYPLSRPVSEEEKPFSEELLQSVVKSIQRNDVVRPMAQLLQLLGQTLGVKRQRSLY
RDILFLSLVALGKDNIDIDAFDREYKLAYDRLVPSLVKLTHNCDRPPSTGVMECRRTFGE
PYL
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtccgctgtccgaggcagttggtggggatgggaaatgatggaggacaaaggc
cctcgtgtagccgactactttgtggtggccggtctgacggacccgtccaagccgttggac
caggagatccactttgatgatgtctgccacaagacggccaagcccaaggcacccatcacc
gatgtggcggtggtggtccgctcgatgggcgaggaggtgccgcaagggttcacttgcata
gaggaaacaccaactggccattcagctgatcttaacaatggcggcctcatggcgccccag
atctacctgtgctacagacggggtcgagacaagccgccactcactgacctgggcgtgctg
tatgagtggaaggagcgactgaagcagggctgccacctcatccagaccacgccctccggt
cgtccagccaacatcagtggcaattcctcccagcggatctatgtcacctaccgccgggcg
cctgagagccagccgcacaccgctctggccgtcaccgacatctgcatcatcatcccaagc
aagggggagacgcccccacacaccttctgcaaggtggagaagaatctcaacagcagcatg
tggggctcctctgtctacctgtgttataagaagtctgtggccaaaaccaacacaatagcc
tacaaagcaggtttattcagcagatatccagaggaggactatgagtcattccctctacca
gagtctgtccctctcttctgccttcccatgggggccacaatcgaatgctggccagctaac
accaaatactccctccctgttttttccacctttgtcctcaccggagcatctggagagaag
gtgtacggtgctgccatacagttctatgagacctatccgcaggagtgtctgacggatcag
cagctctcccagctgggtctcctgagcccggatccacacaaaccctcctcctccaacaca
acgctgacagccaccagcagcaccactaacagcaccacaaccccacgctctgtctacacc
aacaagtgtatctgcctgctttcccactggcccttctttgacgctttccgcaagttcctc
acattcctctatcgctactccatctccggccctcatgccctgcccatagagaagcacatc
tgtcattttatgcacaaagttcccttcccttcctcccagaggcctcgcatcctggtgcag
ctttcccctcatgacagcttgatgttgagccagccagtgtcttctcctttaccgctcagt
ggtggtcgattttctacgctgctccaaaaccttggaccagagaacgccgtcaccttgctg
gtgtttgctgtcactgaacataagatcctggttcactcattacgacccgccgtactgacc
agcgtcactgaagctctggtgtctatgattttcccgttccactggccgtgcccttatatt
cctctgtgccccctggcgttggctgacgtgttgagcgccccctgtccgttcattgttggt
gtggactcccgctactttgatctttatgaccccccaccagacgtgagctgcgtggacctg
gacacaaacaccatcttccacaatgaagataagcgagccctcacgtggaagatcctgcca
aagaaagcctgtaaaaacctaatgaatgtgctgagcaatctctaccagcagcttgtggat
ggtcagtgccgtcctgacgggctgctggagctgagcatgagcgattcatcagagctgagc
tgtgggaagagcctccacatgctggagctggagatccaggaagccttcctgcgcttcatg
gcagccattttgaaaggctaccggtcattcttacgacctatcacccaggcaccctctgag
aaagccaccgacgctagctccctttttgacttgcaagggttcttgaagagccgcgaccgc
tcacaccagaagttctactcactgatgaccaaaacccagatgtttatccgctttattgag
gaatgctcctttgtcagcgacaaagacgccagtctggccttcttcgacgactgtgttgac
aaagtggacagtgacaggccggaggagaccaggctgatagagattgatgaatcccagcgc
agtgagcacacagtctttatcacacctccagagctgcctcctctgcctgagggggaggaa
tatccactatgctacaggtatgatggtttcccagtgttaagtcttgacctgtttgaccct
gtggagggcctgcggaccacctcctcccgcctcgctgccaagcacagctgtcccaccagc
cctgcccccatgtttagacgcaccaagcaggagatcaaatcagcccagaagatagccaag
aagtactcgtctatcccccagctgtggtccaagtgcctgctccgtcactgctatggcctg
tggttcatctgtctgccagcatacgtgaaggtgtgccactcaaaggtgcgggcacttcgc
accgcctacgatgtcctcaggaagatgcaggcaaagaaattgcagccccctgacgaggtt
tgttaccgggtgctgatgcagctgtgtggacaatatggccaacctgtcctggctgtcagg
gtcctctttgagatgaagaaggccggagttcaccccaatgccatcacttacggctactac
aacaaggcggttttggagagcacgtggccctccagcaccagaggaggatacttcctgtgg
atgaagctgagaaatgtcgtcgtgggcgtggcgcagttcaaacaggcgctgcgacgacac
gctcccctcacccagagccctctgtcagatggcagcgacctggacgctgtgagtcactgc
agcctggatagctctgccgacactaacctggccgagcagggcccctacgccactgactcc
gtcaaagtagaccccactgatgatagatctagcacaggggatcaatcagacttgggttat
aactcactgtccaaagaggaggttcgaagaggagaccccagtgccccggactcggccccc
gacaaagatgacaagaaggagagcgactgcagctccttgtcagagacggagagcgccaag
ggaagtaaagattgcctccctcagctggacatggaggtccattcctccttcaaatcccgt
ggcattgttcgcagcagctgtccatacgacgattcatcctgtaaacccaaaggctctgcc
agcgcaggccatgttgcaggtctcctcttcacttcctcactggatgagatcggtggggtc
caggccaacagtttgctcaggagacataagagtgctttggaggagacggtaggcagcgcc
agaaacggctcagctcttgactggctgggcgtgagggaccgccaacttagcagcgacacg
gtgggcagcagcggcagtggcaccactgtcctcggcctgggcatgagccaaggtgaaacc
gacccagataagatcgcaggacacttgggcgcggacgtcaaaattctctccgctgccaac
ttgggtaaaaataagaggcctcaatcactgccactgggtgcgttagaggggccggctgca
aaggctggtgctgccaggagtcgtgatcacagggaggaggaagaggagggacaagactct
agtgatgaggacagaagtaatacagaggccatttttgacttggaagatctggatttagac
aaacctgccacaggggctggaatcagctctcacaaaaccaacaaatctcacaagaaacct
gtcgaacgcagcgccagctacagtggcatgagcaccgagacatccagaggggctgtcaag
cgcacaggcattgagacaggctacgaccctctatccctgctggcagcagagtcacagtct
gagcaggaaagtgaggatcagtacccagagggggacgacaccagcacgcagagtgcccgt
aggcacctggccagggagattgagctctacatgaaccacctgggtagccctttgagcagc
cgtacacccagtctggacctgcaggaccctgctagccccctccttctctacccctcctca
ctctctatcccccgcagagccagccttccccacagctcccccctcaggactgctggagta
ccccgctcccgcaccttccacccaccctcgccctcccaacccatctcacgacaacgtctg
tgctcgtcgcctgcctgtcgcagctctagcacaacccccagccccagcccccgacccagc
ccgtacagggagaggacagacaggatgagcctggcgtccccttcaccctcctcctcctcc
tttgctctggacactctgctcacgccaacgcttgatgtattcaagaccagtgtattctct
gctgggaagggcgtggcagagaaggcgagccgctggtattcccgtcttgccacatacacc
acacctaccaaggatgggctcagtgaccgtctaagtgtgtcctccctcggtgttggagat
ccagactgctcctccctgctggatgaagaggactgcggggagtcagggagctctgtggtc
tctccacagaggaatggccctgcagggccccgcaggagccccaggcgcagccccctccgc
agcagactggacagccccactgcaggctccagccttggtgggcccacatctctgcttcct
gacaagtcggacctcggctcttcgcgctacaccagcaacaccagcatcttcaacaactac
gccatggagctgctgatctccagctgttctcgctgtaagacgtgtgactgcctggtgtac
gatgaggagatcatggctggctggacggcagacgactccaacctgaacaccacctgcccc
ttctgtggaaaccccttcctgcccttcctcaacgtggagatcagggacatgcgaggaccc
ggcaggcttttcctgaagggcagcccgtcggtggatgaggcaatgacctcatcctactcg
gcctccacaggtttggacacggggacgtccaccttgtccaccccctgtcctacaacagct
gtattccccccctcccctgtgattgctgtccaggagtgctctgggagtggaaggactcga
gcggccagggctcaaggtatcgacattcccacagaccgccggcagggggcgctgtccccc
ggagcgcacatggctcgcagcgtcagcgcctttgttcctctggacgaagcgtcccgactc
aaccgctgtgtgccgacgtcaggcagcctgcccagccgtctcaacgaaactgcagaccca
ctgagcatggagtggcggctccacaacccggagccggtgactgttccctacctgagcccg
ctggtgctgtggaaagagctggagagtctgctggagaacgagggcgacccggtgatcaca
gaggccgacatggtggaccatcatcccatcatctactggaacctggtctggtacttcaga
cggttggacctgcccagcaacctgcccggcctcatcctcacctctgagcactgcaacaga
gactcacaggttcctcgtcactggatgtcggaggacagtaaacacgtgttgatccagatc
ttgtgggacaacctcaagctgcaccaggaccaaatccagcctctgtacatcctctggaac
acgtacaatgtgggttaccctctgtcccggccggtgtctgaggaggagaagccgttcagc
gaggagttactgcagagtgtggtgaagagcatccagaggaacgacgtggtccggccgatg
gctcagctgctgcagctgctgggccagacgctcggggtcaaacggcaaaggagtttgtac
cgggacatcctctttctctctctagtggctctgggaaaagacaacattgatattgacgcc
ttcgatcgtgagtacaagttggcgtatgatcgcctcgtgccgagcctggtgaagctgacc
cataactgtgaccgtcctcccagcacgggggtcatggagtgccgcaggacgtttggagag
ccttacctgtga
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integrated database retrieval system
