Micropterus salmoides (largemouth bass): 119889926
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Entry
119889926 CDS
T07309
Symbol
si:ch211-186j3.6
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119889926 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Cadherin related
119889926 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
Cadherin_pro
EGF
CADH_Y-type_LIR
hEGF
RET_CLD1
Y_Y_Y
Big_9
GspA_SrpA_N
Motif
Other DBs
NCBI-GeneID:
119889926
NCBI-ProteinID:
XP_038556777
LinkDB
All DBs
Position
Unknown
AA seq
2959 aa
AA seq
DB search
MRYSVMIWVAFLPILISCAFGNRTVEQVPFFHGHVFENSSPGSRVNGLSIPLKRLNSQRL
CGTGETGSAAAHFKLLGDGSENFRVFAHHKRGHILLKTSGVLDREERAEYALGLGLCCGQ
CAGLSREEDEESPVVAEVASVKVDVLDTNDHQPTFPGVNVKLSLDDATALRTAIYTVKAR
DNDSGKNAELIYFALPKNGSFYAVPKTGDILLVDSILGLDEPIKFKVFARDRGWPPRTSQ
SIAVEISPRQWPVAPSLNPQQGRRNPKSQIKVPARKSRSILESDSPVFINVSEDAGIGSV
VMNLNPVRFQSAAFELVEPDAESSPVSVSRDSGDIVISRRLDRETEPLVEISVKVQDKRG
PEWYFVRVELTVTDVNDNVPEWSMVPAPYLAVVSPDAPAGSLVYKLYAQDGDEGNNGEVE
YFLSDGGDGRFEVDRKSGHVRTTGLPLQRDREYLLTVVAADRLGSRSAPAVVSVVAGARP
PQFTNASFTIAIPENTPEGQPFLVTPAVSFQKKTISYSLLINPSSLFSISAETGEICLTR
PIDYESDQHRYLLLVRASEGLDSMSSAAEVRVVIVDENDCVPEFLQSIYSKDGVPETVTT
ATSLLQVSANDCDSEENAELTYYTMSPDFTISPHGTIFPAGPLDYERPNHLYEFVVMAVD
KGEVPRTGTTTVRIRMANVNDEAPEFSQHIYRTFVSEDAGPNTLVATVLAKDPDGDGITY
KITTGNEDGNFVIDSQKGLIRLRSSPPPHLQGVEYVLNVTATDDNASGGPQALSATAQVL
VGVDDVNNNKPVFEKCQQYRESTSVLENQPAGTFVLQVHAVDADEGSNGRVTYGFMHKDS
TVPAFSIHPDTGVIVTARKFDRERQREYAVTVTATDQAADPLIGICQLNILILDQNDNSP
KFENIRYEYFLREDTMVGTSFLRVAAHDDDFGTNAAITYSMSSEQPGYLRVNPLTGWVYV
NQPISQRTYITREIVATDGGNRSSSVELTVTITNVKNQPPQWEKDSYNVVIPENTVRDTP
IVTIKATSPLGDPRVTYNLEDGMVPETNMPVRFYLTPNREDGSASILVAEPLDYETTRNF
ILRVRAQNVAAVPLAAFTTVYVNVTDVNDNVPFFTSSIYEASVTEGAESGTLVFQVSAND
LDLGRNGKISYSLLEDRSGDHQYFRIDAEVGFIYTQTVFDRETKSSYLLEVQSVDGWESA
RPGKHGQPNSDTAYVRVFISDVNDNKPAFAQASYEVDVDEDADVGFAILTVSANDGDEGG
NAKLRYQITSGNMGGVFDVEPEVGTIFIAQPLDYEQNKRYKLHVLASDGKWEDYTSVTVN
VVNKNDEAPVFTVNEYYGSVTEELDGSPVFVLQVTASDPDKDADQEALRYSLHGQGAESE
FIIDEVTGKIYAQRTLDREERAVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPVFTC
APSCHGDVAENSVVGTSVMEMTATDLDDSAVGQNAVLSYRIMGSLDATNIEVGGAPTFSE
MFTINPTTGTITVAMGGLDREQVETYLLVVEARDGGGMTGTGTVTIQIKDVNDHAPRFTD
HSCLARISENAEPNSEVLELAAEDRDTGENAQLTFSVVAGDQEQKFYMVSHKQEQHGTLR
LKKRLDYERHSEQRFNLTLKVEDLDFSSLLHCVVEVEDYNDHAPVFIPHFLSLAPLPEDI
TVGTSVARLVASDSDSGQNRDITYSLSEDSDPDGLFTIDQSGVLSVARPLDRERIPLHHL
VVIATDHGVPPLTGSATVQLPLLDINDNGPEFEAAYSPIVFENVAGPQVVRLNQTSTLIR
AVDHDSPENGPPFHFTVPSEYRHSNDFYLQDNLNGTATLTALRTFDRERQKEFLIPIVMS
DSGRPAKTVTSTLTVTIGDQNDHAHVAGEKKIFINSHRGRMPTTVLGKVYSPDPDDWDNK
TYVFEGHVPSYFILNKRTGFLIIKENAPPGTYQLQVSVSDGVWPDAVSTVTVHVRELRDE
AIYNSGSLRLADITAKEFIELRGKQRSRYELLVDFLSEMLSVPPDDVNIFSLMDVKERML
DVRFAVHGGPSFLQPEKLHGYLAAHKQKLQSFMQVSVFQVRVDECPSSECAGAGGCTNVL
NVRDTPTVVDCGTMSLVSVTVESTAVCSCPGREQSHQPCTAYPRNPCFNGGVCVDTQHGY
RCQCPAQFEGPECQQNKHSFHGNGYAWFPPMMPCFESHVSLEFITDVADGLLLYSGPLAQ
LQAWDQEDFMAIELIDGTPTLKINHGSGTVVLQLPGNVNVADRRWHRLDVRSNSKEVRFT
LDRCSGAAVMEMEGLGSWLTTEDHSSCEVTGVTPNTDRHLNMSHVLQLGGVNEDIPYIYP
QLQHKHFTGCIRNLIVDSKLYDMGSPADSQSSSPGCLTTDSSCVNMGFPSCGHRGRCHGE
WGSFSCQCVPGYTGHQCEEEVSEYSFDGHSHVHYQLASPLPARRTWVQALVRTRKHSSTI
LHLISKGQTEYLRLEIYQGLLCVFYNLGDGDYNLTLPTYRLDNGEWHEVFLDRHDNEMTL
RLDGGGGQREVTGSRGRSREILIDHTSVMLGNTFPSGINKSFQGCMRDIRLNGRYMPLDS
QPRDGVSQVSVQGLSLGCSSDSCKRNQCSPPFTCVDLWRVHECRCPPGHMVRVNGTRKSC
VYTLCATRPCHRGTCVAQSPSKFTCHCPEGYRGRHCETTLAIYREDVGLSFSSLFAICIC
FMALLVLLLGIFLYTRWRSYKGLKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAY
DMAELQKSLQPSPAQSVQYCRSRALHHPPPPPHHHHHLLHQAPPAPASAQPLEPLSRTAS
STTLPPSAASTTSTATTTTSFRRDVPPTRLPAQGQARPSQLARRSLSFSSQDLARYLCEI
IRDADQHPDTGPFDSLQVFSTEGGGSPAGSLSSFSSSGLDGCSSGDGGREGGREETLGEW
GPRFEKLRALYERAEASDL
NT seq
8880 nt
NT seq
+upstream
nt +downstream
nt
atgagatattcagtcatgatttgggtcgcgtttttacctattttgatttcgtgcgctttc
gggaacaggaccgtggagcaggtgccgttttttcacgggcatgtatttgagaactcgtct
ccgggctcccgggtcaacggactgagcatcccgttaaagcgcctcaactcgcagaggttg
tgcggaaccggggaaaccggctcagcggcagcgcactttaaactcctgggcgacgggagc
gagaatttccgtgtctttgcgcaccacaaacggggacatattttgttgaagacttctggg
gttctggatcgggaagagcgggctgaatacgctctgggtcttggtttgtgttgcgggcaa
tgcgcaggactttcccgggaagaggacgaggagtctccggtagtcgctgaggtggcgtcc
gtcaaagtggacgtcctggacaccaacgaccaccagcccactttccccggtgtaaatgta
aaactaagcctggatgatgccactgcgctccgcacggcgatctacacggtcaaggcgcgg
gacaatgacagcggcaagaacgcggagctcatctacttcgctttgcccaaaaacgggagt
ttctacgcggtgcccaaaaccggagacatcctgctggtggactctatcctcggtctggat
gaaccgattaagtttaaagtgtttgcccgggaccgcgggtggccacctcgaacaagccag
agcatagctgttgagataagtccacggcaatggcccgtggcaccctcgctgaacccccaa
caggggagacggaatcctaaatcgcaaattaaagtaccagcgcgaaagtctaggtcaata
ctggaatcagacagtcccgttttcatcaacgtgtccgaggatgctgggatcggttcagtg
gtgatgaacctgaacccggtgaggtttcagtcggcagcgtttgagctggtggagcccgac
gcggagagctcaccagtcagcgtgagccgggacagcggggatatagtgatatcacggaga
ctggacagagagacggaacctctggtggagatctccgtcaaagttcaggataagaggggt
ccagagtggtacttcgtcagagtggagttgactgtgacagatgtaaatgacaatgtcccg
gaatggagcatggttcctgctccctacctcgctgtggtttcgcctgatgcccctgcaggc
tcgctggtctacaaactctatgctcaagacggggatgaaggcaacaatggtgaagtggag
tacttcctgtctgatggtggtgatggtcgttttgaagtggacaggaagagcggccatgta
cgaacgacaggccttcccctgcagcgggacagggagtacctgctgacagtggtggctgct
gaccggctgggcagccgcagcgcccctgccgtcgtctccgtggtggctggggcccggccg
ccacagttcaccaacgcttcctttaccattgccatacctgaaaacacccctgaaggccag
cccttcctggtcacacctgcagtgtctttccagaaaaaaacaatcagctacagccttctc
atcaatcccagcagtctcttctccatctcagcagagactggtgaaatctgcctgactcgc
cctattgactatgagagcgaccagcatcgctacttgctattggtgcgagccagcgaaggc
ctggacagcatgagcagtgcagcagaggtacgagttgttattgttgatgaaaatgactgc
gttccagagttcctccagtctatttacagcaaggatggtgtaccggaaactgtgacaaca
gcaacctccctgctgcaagtgtcagccaatgactgcgactcagaggagaatgcagagctg
acctattacaccatgagtccagacttcaccatttctcctcatgggaccattttccctgcg
gggcctctggactacgagaggcctaaccacttgtacgagtttgtagtgatggcagttgac
aagggggaggtccctcgcactggcacaactactgtacggattcgaatggctaacgtcaac
gacgaggcacccgagttctcccaacatatatatcggacattcgtgtcagaggacgcgggc
cccaacacccttgttgccacggtgctggcaaaggaccctgatggggatgggatcacatat
aagatcaccacaggaaacgaggatggcaactttgtcattgacagccaaaaaggtttgatc
cgtctgcgctccagcccgccccctcacctccagggtgtcgaatatgtcctcaacgttaca
gcgacggatgacaacgcctcaggcggacctcaggccttgtcagccacagcccaagtccta
gtgggggtggatgacgtgaataataacaagcctgtctttgagaagtgtcagcagtaccga
gagagcacgtcagtcctggagaaccagccagcggggacgtttgttctgcaggttcatgct
gtggatgctgacgagggctccaatggcagggttacatacggcttcatgcacaaagactcc
actgtgcccgcattcagtatacacccagacactggagtaattgtgacagccaggaaattt
gaccgcgaacgccaacgggagtatgcggtgacagtgactgccactgaccaagcagctgac
ccactcattggcatttgtcagctcaacatccttatcctggaccagaatgacaacagtcca
aagtttgagaacatccgatatgagtacttcctccgtgaggatacgatggtcgggactagt
ttcttgcgggtggcagctcatgacgatgactttggcaccaatgcagccatcacatactct
atgtccagtgaacagccggggtacctcagggtcaaccccctgacaggctgggtgtatgta
aaccagccaatttctcagaggacatacatcaccagggaaattgtggctacagacggaggg
aacaggagcagttcagtggagcttaccgtcaccatcaccaatgtgaagaaccagcctcca
cagtgggagaaagacagctacaacgtggtcataccagaaaacactgtccgagacacaccc
atcgtgactatcaaagccacctcccctcttggggatcccagggtaacttacaacttggag
gacggcatggtcccagagaccaacatgccagttcgcttctatttgacccccaaccgagag
gatggttcagcctccatccttgtggcagagcccctggactacgagaccaccaggaacttc
attctgcgtgttcgagctcagaatgttgcagctgtaccattggcggccttcaccacagtc
tatgtcaatgtcacagatgtaaacgacaacgtcccatttttcacttcctccatctatgag
gcctctgtcaccgaaggggcagaatcagggactttggttttccaggtttcagccaatgac
ctcgatttgggtcgcaatggcaagatctcctactccctgctggaggatcgcagtggggac
caccagtattttcgtattgacgcagaggtgggattcatctacacacagactgtgtttgac
cgtgagaccaaaagctcttacctgttggaggttcagtctgtagatggatgggagtcagcg
cggcccggcaagcatggacagccaaactccgacacggcatatgttcgcgtttttatcagc
gacgtgaacgataacaagccagcgtttgcacaggcgtcctatgaagttgatgtggatgag
gatgctgacgtaggcttcgccatactcactgtcagtgccaacgatggggacgaaggtgga
aacgctaagctgcgctaccagatcacatcagggaacatgggaggagtatttgatgtggaa
ccagaggtggggactatctttatcgcccagcctttggactatgaacagaacaaaaggtac
aagcttcatgttctggcttcagatgggaaatgggaggattacacatcagtgacggtaaac
gtcgttaacaagaatgacgaggctcctgtgtttaccgttaacgagtattacggcagcgta
acagaggagctggatggctcacccgtgtttgtgttacaggtaacagcgtctgacccagat
aaggatgctgaccaggaggccctgcgttactctctccatggccagggtgcagagagtgaa
tttataattgatgaggtcactggcaagatctacgcccagcggaccctggaccgcgaggag
cgggccgtgtggcgtttcgtcgtcttggccacagacgagggcggggaaggtctgactggc
ttcacagatgtcatcataaatgtgtgggacatcaatgacaatgcgccagtcttcacctgt
gcccccagctgccacggggacgtggcggaaaactctgtagtagggacgtctgtgatggag
atgacagccaccgacctggacgactcagctgtcgggcagaacgctgtgctgtcttacaga
attatgggtagtttagacgccactaacatcgaagtaggaggagcgcctaccttctcagaa
atgttcactatcaaccccaccacagggaccattactgtagccatgggcggtctggacaga
gagcaggttgagacctacctcctcgttgtggaggccagagatgggggaggtatgacagga
acaggaactgttaccattcagatcaaggatgtgaacgaccatgctccaagattcactgat
cattcctgcctggcaaggatctctgagaatgcagagcccaattcagaggtcctggagctt
gctgcagaggacagagacactggagaaaatgcccagctgacctttagcgttgtggctgga
gaccaagaacagaagttctacatggtcagtcacaagcaggagcagcacggcaccctgagg
cttaagaaacgtctggactatgaacggcacagcgaacagagattcaacctcacactgaag
gttgaagacctggacttctccagccttctgcactgtgtggtggaggtggaggactataat
gatcatgctcctgtcttcattcctcacttcttgtctcttgccccactgcctgaggatatc
accgtgggaaccagtgtggctcgtttggtagctagtgactctgattcaggccagaaccga
gacatcacctatagcctatcagaggactcagatcctgacgggctgtttaccattgaccag
tccggtgtactctctgtggcgcggcctctggatcgggagcggatacccctgcatcacttg
gttgtcatagcaaccgatcatggggtgccacctctaacaggcagtgccacagtccagctg
cctctgttggatataaatgataacggaccagagtttgaggcggcatactccccgatagtc
tttgagaatgtggccggaccacaggtagtgagattgaaccaaacgtcaaccctcatccga
gctgtggaccatgactctccagagaatggtccgcccttccacttcactgtcccctccgag
tatcgccacagcaatgatttctacctccaggacaacctaaatggcacggcaacacttacg
gctctgaggacatttgaccgtgagcgccaaaaggagttcctcattcctattgttatgagt
gacagtggccgtccagccaaaacagtgaccagcaccctgacagtgaccatcggtgatcaa
aatgatcacgcacatgtggcgggagagaagaagattttcatcaatagtcacagaggccga
atgccgactacagtgcttggaaaggtctactctcctgatccggatgactgggacaacaag
acgtatgtctttgaaggacatgtgccaagttactttatcctgaacaagcgaacaggtttc
ctgattatcaaggagaacgccccacctggaacctatcagttgcaggtcagtgtgtctgat
ggagtttggccagatgctgtctctactgtcactgtgcacgtgagagagctgcgagacgaa
gccatctacaactcagggtctcttcgcctggcggacatcacagcaaaggagttcattgaa
ctgagagggaagcagcggagccgctacgagctgctggtggacttcctgtctgagatgctc
tccgttccacctgatgatgtcaacatcttcagcctaatggatgtgaaggagcgaatgctg
gatgttcgctttgctgtgcacggtgggccctccttcctccagcctgagaagttgcacggt
tatttggccgcccacaaacaaaagctccagtcattcatgcaggttagcgtgttccaagtt
cgagttgacgagtgtcccagctcagagtgtgccggcgccggtggctgcaccaatgttttg
aatgtgcgggacactcccacagtggtggactgtgggactatgagccttgtatctgtgaca
gtggaatccacagctgtgtgctcctgcccaggaagagagcagtcccatcagccctgcacc
gcatatcccagaaatccctgcttcaacggtggtgtgtgtgtggacactcagcatggctac
aggtgccaatgcccagctcagtttgaggggcctgagtgccaacagaacaagcacagtttc
catggcaatggctatgcctggtttcctcccatgatgccttgtttcgagagccatgtgtcg
ctggagttcatcacggatgttgctgatggactgctgctgtatagcggcccgttagcccag
ctgcaggcctgggaccaggaggacttcatggccatagagctaatagatgggacccccacc
ttgaaaatcaaccatggctctggcacagtggtgctacagttgccaggcaacgtgaatgtg
gcagacaggcgctggcatcggctggatgtccgcagcaacagcaaggaagtgcgtttcacc
ctggatcgctgttcaggggcagcggtaatggaaatggagggactgggtagctggttgacc
accgaggaccactcttcctgtgaagtgacaggcgttacacccaacactgacagacacctg
aacatgagccacgtgctgcagctcggtggtgtgaacgaggacatcccctacatctaccct
cagcttcagcacaaacactttaccggctgcatccgcaacctcatcgtggacagcaagctg
tatgatatgggctccccggccgactcccagtccagctctccaggctgcctgaccactgat
agcagctgtgtcaacatgggctttccgtcctgtggccaccgcggtcgctgtcatggcgag
tggggctccttcagctgccagtgcgtgccaggatacacaggacaccagtgtgaagaggag
gtctcagagtattcctttgatgggcacagtcacgtgcattaccagttggcgtccccgttg
ccggcccggaggacatgggttcaagccctggttcgaacccgcaaacacagcagcaccatc
ctacatctgatctcgaaggggcagactgaatacctacgactagagatctaccagggcctc
ctctgtgttttctacaacctcggtgatggtgactacaacctaaccctgcccacctatcgc
ctggacaatggtgaatggcatgaggtcttcctagatcggcatgacaatgagatgacactt
aggctggacggtgggggaggacagcgggaggtcactggatcgcggggcagaagtcgagaa
atcctcattgaccacacttcagtgatgctgggaaacactttcccctctggaatcaataag
agcttccaggggtgcatgagggacatacggctcaatgggcgctacatgccactggacagc
cagccacgggatggggtttcccaggtcagcgtacaaggcctctcgcttgggtgctcgtcg
gattcctgcaaaaggaaccaatgtagcccccccttcacctgtgttgacttgtggagagtg
cacgaatgcagatgccctcctggccacatggtccgtgtgaatgggaccagaaagtcatgt
gtctacaccctgtgtgctacgcggccttgtcaccggggtacctgcgtggcccagtcaccc
tccaaattcacctgccactgccctgagggttaccgaggacgccactgcgagacgacactg
gccatctaccgggaggacgtgggcctgagcttcagctccctctttgccatctgcatctgc
ttcatggccttactagtgctgctgttgggaattttcctgtacacccgctggaggagctac
aaagggctgaaggagggcgtttaccacgtctcagcccaccacgacggctgggaggacatc
cgagagaacgtcctcaactatgacgaggagggaggcggggaggaggaccagaatgcctac
gacatggcggagctgcagaagtccctccagccgagcccagcccagtcggtccagtactgc
cgctccagagccctgcaccaccctcctcctcctccccaccaccaccatcatctcctccac
caggcgccccccgccccggcctctgcacagccgctggaacccctcagccggacagccagc
tccaccaccctgcctccctctgcagcttccaccacctccactgccaccaccactacaagc
ttccgtagggacgtccctcccaccagactcccagcccagggccaggcccgcccctcccag
ctggcacgccgctccctgtccttctccagccaggacctggcccgctacctgtgtgagatt
atccgcgacgctgaccagcatccggacactgggcctttcgactccctgcaggtcttttcc
accgagggagggggctcgcccgccggctccctcagctccttcagctcttcagggctggac
gggtgcagcagtggagacgggggaagggagggggggagggaggagacgctcggggagtgg
gggcctcgctttgagaagctgagggcgctatatgagcgagcagaagccagcgacctctga
DBGET
integrated database retrieval system