Micropterus salmoides (largemouth bass): 119890023
Help
Entry
119890023 CDS
T07309
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119890023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119890023
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
119890023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
119890023
NCBI-ProteinID:
XP_038556951
LinkDB
All DBs
Position
Unknown
AA seq
234 aa
AA seq
DB search
MSVVPPSRSSAGWPRGGAVQFGNKYITGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSPGEDEV
EGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRYCVQLHLQLTE
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgtgcctcccagtcgctcgtccgccggctggccgcgcggtggtgccgttcag
tttgggaacaaatacatcaccgggcctgctaaaccgctcacactggagaggaccatcaac
ctataccctcttaccaactacacgttcggcaccaaggagcctctgtatgagaaggacagc
tccgtggccgctcgcttccagcggatgcgggaagagtttgataaaatgggaatgcggagg
acagtggagggtgttctcattgtccatgaacacaggctgcctcatgtgttacttctgcag
ctgggcaccacgttcttcaaactacccggcggagagctgagtcctggagaagatgaggtg
gagggtctgaaacgcctgatgaccgagatcctcggacggcaggacggcgtgaaacaggac
tgggtgattgacgactgtatcggcaactggtggcgccccaactttgagcctccacagtat
ccctatattccagctcacatcaccaaacctaaggagcataagaagctattcctggttcag
ttgcaggaaaaagcactgtttgccgtccccaagaactacaaactggtggcagcgccgttg
tttgaactgtatgacaacgctcctggatatggaccaatcatttccagtctaccacagcta
ttgagcaggtattgtgttcaacttcatttacaactaactgagtga
DBGET
integrated database retrieval system
