KEGG   Micropterus salmoides (largemouth bass): 119890033
Entry
119890033         CDS       T07309                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119890033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msam03000]
    119890033
   03021 Transcription machinery [BR:msam03021]
    119890033
Transcription factors [BR:msam03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    119890033
Transcription machinery [BR:msam03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119890033
  RNA polymerase III system
    TFIIIB
     119890033
  RNA polymerase I system
    SL1/TIF-1B
     119890033
SSDB
Motif
Pfam: TBP NUDE_C
Other DBs
NCBI-GeneID: 119890033
NCBI-ProteinID: XP_038556967
LinkDB
Position
Unknown
AA seq 304 aa
MDQNNSIPGFQGLASPPGAMTPGMPMFSPMMPYGSGLTPQPVQNTNSLSILEEQQRQQQQ
QQQQQAQQANTGLPGTSGQTPQLYHSQAVAGSTTTALPGNTPLYNTPLTPMTPITPSTPA
SESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFS
SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL
THQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF
RKTT
NT seq 915 nt   +upstreamnt  +downstreamnt
atggaccaaaacaacagtataccaggcttccagggactggcctcccctccgggtgcgatg
accccaggcatgcccatgttcagtcctatgatgccatatggctcgggcctgacaccccag
cctgtccagaacaccaacagtttgtctatactggaggaacagcagaggcaacaacagcag
caacagcaacaacaggcacagcaagcaaatacaggccttcctggaacgtcagggcagacc
cctcagctttaccattcccaggcggtagcgggctcgaccaccacagcactgccagggaat
accccgctctacaacaccccgctgacccccatgacccctatcacaccctccacaccagcc
tcagagagctctgggatagtaccacagctacaaaacatagtatctactgtaaatctgggc
tgtaaactggacttgaagaccattgccttgagagccaggaatgcagagtacaacccaaag
cgttttgctgcagtcatcatgagaatacgagaacccaggaccactgctctcatcttcagc
tccgggaagatggtttgcactggagccaaaagtgaggagcagtcgaggttagctgccaga
aaatacgctcgtgtggtgcagaagctcggttttcctgcaaagttcctggacttcaagatt
cagaacatggtgggaagctgcgacgtgaagttccccattcggctggagggattagtcctc
acacatcaacagttcagcagctatgaaccggagctgtttccaggactgatttacagaatg
atcaaacccagaattgtcttgctcatctttgtctctgggaaagttgtactcacaggtgcc
aaggtgagagcagagatctacgaagcatttgaaaacatctaccccatcctgaaaggcttc
cgcaaaacaacgtag

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