Micropterus salmoides (largemouth bass): 119890037
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Entry
119890037 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119890037
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
119890037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
119890037
NCBI-ProteinID:
XP_038556975
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYXKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMLKEQEEKRSREMEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGGGGGRRKKGGDMDEFVNDDSDEDLPLKKKKKRKGGSGSEQEEGEEGEKKSRKKR
RRPAKGGGDDGSDDEEGGSRLKKQRKPKERKRIEKPQPERLPPSLKGKIKSKAIISSSES
SSDEDGLKIAEDRHQRDSGSGSDDEGEGGHKKRIASDSESDGGRNRSGSEVGSPRRSVGS
EDDDSGSDRPVKKRRVQRQSDSEQSDNESKRSQSGSDDESRPGSPRSPGSPVAVSDRGSD
RGSEVGSDNEGSPRRSDNGSELEAGSNNEDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctctatcgagattcctttacgggacacggatgaggttatcgagcttgac
tttgaccagctgccagagggagacgaggtcatcagtatcctgaagcaggaacatacacag
ctgcacatatggatcgctctggcgctggagtactacaagcagggcaaaacagaggatttt
gtcaagcttttagaggcggctcgcattgatggaaaccttgactacagagaccacgagaag
gaccagatgacttgtcttgacactttggctgcttactatgtccagcaagcgcgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacactgctctatactatggca
gacaagatcatcatgtatgaccagaaccatttgttgggaagagcctgtttctgcctgctg
gaaggagacaagatggaccaggctgatgctcaattccattttgtcctcaatcagtccacc
aacaatatccccgctttgctcggtaaggcctgcatctcgttcaataaaaaggactacaga
ggagcgctggcatattacnaaaaggctctgcgcacgaaccctggctgcccagctgaggta
aggctggggatgggccactgttttgtcaagctcaacaaactggagaaggctcgtttggct
tttggccgagccctggagctgaattcaaagtgtgtcggagctcttgttggtttggcggtt
ttagagctcaacaacaaggaggctgattctatcaagaatggagtgcagcttctgtcgcgg
gcctacaccatcgaccccagcaaccccatggtgctcaaccaccttgctaaccacttcttc
ttcaaaaaggattacagtaaagtgcagcatctggccctccacgctttccataacacagag
gtcgaggccatgcaggcggagagctgctaccagttagcccgctcatttcacgtgcaagaa
gactatgaccaagcgtttcagtattactaccaggccactcagtttgcctcgtctaccttt
gtgttgcccttctttggcctgggtcagatgtatgtctatcgaagggacaaggagaacgcg
gcacagtgcttcgaaaaggttttaaaggcctatcccaacaactacgaaactatgaaaatt
ctggggtctctttatgcaacatctgatgatcaggaaaagcgagacatagccaaaggtcac
ttgaagaaggtaacagagcagtatccagatgatgtggaggcatggattgagctggctcaa
atcctggagcagactgacattcaaggagcactatcagcatacggcacagcaacacgcatc
ctgcaggagaaggtacaggccgatgttccccctgagatcctcaacaacttgggggctctt
cacttcagactgggcaacctcggagaagccaagaaatactttcttgcatccctcgaccgg
gccaaagctgagggagagcatgacgagcattactacaatgccatttctgtcaccacctcc
tacaatttggcccgcctgtacgaggcaatgtgcgaattccacgaagccgagaaactctac
aaaaacatcctgagagagcatcctaactacgtggactgttatttgcgtcttggggcgatg
gctcgtgacaaaggaaatttctacgaagcttctgactggttcaaagaggccctgcagatt
aaccaggatcacccagacgcctggtccctgatcgggaaccttcacttggccaaacaggaa
tggggtcccggtcaaaagaagtttgagcgtattctcaagcagccgtccacacagaacgac
acctactccatgctggctctgggcaacgtgtggctgcagactctgcaccagcccaccaga
gaccgggaaaaggaaaagagacaccaggaccgagccctggctatatacaaacaagtcctg
cgaaatgactccaagaacctctatgctgccaatggcattggtgccgtcctggcccataag
ggctacttcagagaggctcgtgatgtgtttgcacaggtgagggaggccacagcagacatc
agtgacgtgtggctaaatctggctcacatctacgtcgaacagaaacagtacatcagcgct
gtacagatgtatgagaactgcctgaagaaattttacaaatatcagaacactgaggtgctg
ctgtaccttgcaagggcactcttcaaatgtgggaaactccaagagtgcaagcagatgctg
ctgaaggcccgtcacgtggcgcccagtgacacggtgctgatgttcaatgtggctctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacttaaaggctgtgctc
agcgctgtcaaagagttggaactggctcacaggtatttcagctacctcagcaaggctgga
gacaagatgaggtttgaccttgctcttgccgcttctgaggccaggcagtgctcggacttg
ctgagtcaggctcagtaccatgtggcgagagcaagaaagcaggatgaggaggagaaggag
cttcgggccaaacaagaacaggagagagacctgctgcgtcagcagatgttaaaagaacag
gaggaaaagcggagcagagagatggaggaacagaagaagctcctggagcagagagctttg
tacgtggagaagaccaagaacctgctcaccttcgcagagggatcaaaggaaatggccaaa
gaaaagaagaagggaggcggcggtggaggacgtcgcaagaaaggcggcgacatggatgaa
tttgtcaatgatgactctgacgaggacctgccactgaagaagaagaagaagagaaagggt
ggcagcggcagcgagcaggaggagggcgaggagggggagaagaagtcacgcaagaagagg
aggagacctgctaaaggaggaggagacgatggcagtgacgatgaggaaggaggatcacgg
ctcaagaagcagcgtaaacctaaagaacggaagaggattgaaaagccccagcctgagcgt
ctgccaccgtctctcaaaggaaagatcaaatctaaggcgatcatctcctcttcggagtct
tcttcagatgaggatggactgaaaatagctgaagacaggcatcaaagagacagtggttca
ggatctgatgacgagggtgagggcggccacaagaagcgcattgcgtctgacagcgagtca
gacggaggcaggaaccgctctggcagtgaggtgggcagccctcggcgctctgtaggctcc
gaggatgacgactcgggcagcgaccgccccgtgaagaagaggagggtgcagcggcagtcc
gactcagagcaatcggacaacgagagcaagaggagtcagtcaggatcagacgacgagtcc
cggcccggttcgccccgttcgcctggttcgccagttgcagtgtctgaccgaggatcagac
aggggttctgaagttggatcagacaacgagggctccccacgccgctctgacaatggctcc
gaactggaagccggctccaacaacgaggatgacagcgattaa
DBGET
integrated database retrieval system
