Micropterus salmoides (largemouth bass): 119890045
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Entry
119890045 CDS
T07309
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04217
Necroptosis
msam04622
RIG-I-like receptor signaling pathway
msam04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119890045 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119890045 (cylda)
04625 C-type lectin receptor signaling pathway
119890045 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119890045 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119890045 (cylda)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119890045 (cylda)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C67
119890045 (cylda)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119890045 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
119890045
NCBI-ProteinID:
XP_038556987
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MSSTLWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVAVDKLELWEDDDDEALGELEVDHVNLVEEDQDFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVFDGKLLCNFASLEHTRLVPICD
VMPEYPMQDQRLQKHSFAPRGTNSDKSTSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSASLSSDNKFHSLPFSL
NRKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPAAPPSPQPPTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCR
PDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYNS
CYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDL
LEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKTHRHGKLSV
PKELQEGMGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNG
FNIPQVSPCPEVEAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctctacactgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtcgtaaaggagtgtacagtggagaagcctccccagaagactctgaggatc
ccccgtggcagtcttggtcaggcctgtcaggaacgcaacagcctggggcgaacactgccc
ccatgcaagggcaaaaaaagtctccgcatcctggatcagaccaatgtggtgctgagcctg
gacgagcgggatgtcctggagctggatgagaagctggctgagctgctgtttcccattacc
aactgtgaggagcgatatgccctgctctgcaacaagtcacggctggagcgcgtccgtgac
attgactgtggttcgaaggtgcgcgtccagctgcgctcaggggatgaaccgctgcccggt
gtggtccgcttcaagggctcgctgctccctgacagagccctctctggaatctggtttgga
gtggagctgctggaggagggccggggccagggcttcacggagggctcctaccagggccgc
cagcttttccgctgtgaggatgaatgcggcgtgtttgtggccgtggacaagcttgaactc
tgggaggatgatgacgacgaagccttgggtgagctggaggtggaccatgtcaatctggtg
gaggaggaccaggacttccctccattggagatcaactccagggtgctggtgcagaccagg
gacggaccagagagaggcaccatcattttttgtgacctgctgccgggcaatgagagcctg
ggctactatgtgggagttgacatggacaatcctattggggactgggatggcgtgttcgat
gggaagctgctgtgtaattttgccagtttggagcacactcgactcgtccccatctgtgac
gtaatgccagaatatcccatgcaggaccaaaggcttcaaaagcacagttttgcccccaga
ggcaccaacagtgacaagtcgacctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgaattttactatactttaaatggcagctctgtt
gatcccccagcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcacttactgacacgccccctgacttcaaccagtcctccccaccctccaga
gccccgccctctgcctcgttgtccagtgacaacaagttccactctctgcccttcagcctg
aaccggaagaccgggcccattgacagcatgagccatgggcctctctccctttctgtccag
tcggtgatgggagagcagcccgagcccccgtcacctgctgcccctccctcaccgcaacct
cccacgcctccccgaggacagccaggtctggaggtgggctctctggtagaggtgaaggag
aacccccctctgtgtggtgtcatccgctgggtgggtctgcctcctggcctgctggagcct
ttggctgggctggagctggaggaggagtgccctggttgcactgacggcaccttcaaaggt
acgcgatacttcacctgcccccccaaaaaagccctgtttgtaaagcttaagtgctgccgg
ccggactcccgcttcccgtccttgcatcactcctcaaaccccatagagcgatgcaactcc
atcgcatttgggggttacctaagtgaggtagtacacgagaacacgcctccacgcacagag
aatgatggtctggatgtcatggtgggaaaaaagaaaggcatccagggccactacaactcc
tgctacctggattcaaccctcttctgtcttttctccttcagctctgtactggacacggtt
ctgctgagaccacgctcaaagactgatgtggagtattacagagagactcaagagctgtta
cgcacagagatagtcaaccccctgcgcatacatgggtatgtttgtgccactaaagtgatg
aagctaaggaggatcctggagaaagtcgaagctgcatctgggtttacctctgaagaaaaa
gatcctgaggagttcctcaacatccttttccatcacatactgagggtggacccgttgctc
aagctaaggtcagcagggcagaaggtccaggactgttacttttaccagatctttatggac
aagaaagacaaggttggtgttcccaccatccagcagctcctggagtggtccttcatcaac
agcgacctaaagtttgctgaggctccctcctgccttatcatccagatgccccgctttggc
aaggacttcaaaatgttcaacaagattttcccctcactagagttagacatcacagacctt
cttgaagacactccacgagaatgtcgaatctgcggaggccttgctctctacgagtgtcga
gactgttacgaggacggggatatcacagctggcaagattaaacagttctgtgaaaagtgc
aatacacaggttcacctccacccgaggaggaaaacccatcggcacggcaaactgtctgtt
cccaaggagctgcaagaaggtatggggcggcagggcagttttccccgccagaggatggag
ctgttcgccgtgctgtgcattgaaaccagtcactacgtggccttcgtcaagtacggcagc
gcagattctgcctggctcttcttcgacagcatggccgaccgtgatggagggcagaatggt
ttcaacatcccccaggtgtctccctgtccggaagtggaggcctacctgaaaatgaccccc
gaggagttgcacgccctggatcccaagagtatccagggccaggcccgacgcctgctgtgc
gatgcctacatgtgcatgtaccagagcccgaccatgagcctgtacaagtag
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integrated database retrieval system
