Micropterus salmoides (largemouth bass): 119890118
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Entry
119890118 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119890118
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
119890118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
Ig_2
I-set
CarboxypepD_reg
CarbopepD_reg_2
ig
Ig_5
V-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
119890118
NCBI-ProteinID:
XP_038557116
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MSVRPLILILGITAATVVTALGSWRRNNQEPGPAVYHSDDNYDWTTWFNVDHPGGRGDYE
QLDAIRFYYRARVCETPRAIEARTTDWVPARETGEKIHADPTVGFWCLNEEQGHERNCSN
YAVRFLCPKDNNVNIQATWGPWSDWSPCPALCGQVGVQVRSRNCQSQSRPCSGSKAERRG
CNGPECLKSDCSLQCVMGKVNAECDACMCEEHILLGSVRGAGGLTAEGSTILRSGKLLTL
TDHNGHFRIPGICPDGNTTLTVSLQGHITHSVVVPHSAERISVLSVQLKRTEKLRVLSNP
ESKVRREGQTAAFCCKVAGTPPPDKYQWFHNNSLLEKQSESTLVLKHLRPEHTGEYHCRA
SGPSGAIKTKPATLKILGRDELSCNPKPESHLIHLPLDCYQNSTDSFYYDVGKCPSSTCA
GQLDNVIRCKDNLAYCCGVQKMEKRQLTCQDYQLPAMVVTECGCQKCVDTKAIVHGRAIA
ADNGEPMRFGHIFMNGVRISRTGYKGTFSIQVPPDTERLVLTFVDNMQKFVNTTKVLPFN
TKGGAVYHEIKLLRKKAPVTISSTEINTLELGEVEGQEAMVQIQIPPNSFYTEKGEVFTG
NVNASLTFLDPRDVSTAAAAQSDLNFVGEEGDTLPLRTYGMFSVDFRGEENNEPLNAGEV
KVFLDSAQVKMSEHLSTMKLWSLNPETGLWEEEGSLQIEKKRRGKREERTFLIGNMEIRE
RRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVVSLINMEPTSGFSSNPRAWGRFDS
AVTGPSGACLPAFCDEQKADAYSAYVMANLGGEELEAVPSAPKLNPNLIGVPQPFLGKMN
YRRSDHEDSRVKKTAFSISVAKPSPNTAEEGNGPVYAFENLKECEEAPFSAAHFRFXRVE
GDRYDYNTVPFNEDDPMSWTQDYLSWWPKPMEYRACYIKVKINSPHEINVRSRNMGGTHP
KTAGQLYGLRDTRSIRDMDQATLSAVCLEFKCSGMLYDHDRVDRTLVKVIPQGSCKRDHV
NQILQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFDG
TSDGTSRVMKSNEGVALTFTCGDHDATRQSAFQAVQSPQGQIITSVVREGRQNKRRQRAN
APRSSRRRSARNPTGRRAATS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaggcctcttattctcatcctgggaatcactgcagccactgttgttacagct
ctaggatcatggagaagaaacaaccaagagcccggccctgctgtgtaccactctgatgac
aactatgactggacaacatggttcaatgttgatcaccccggaggccgtggagactatgag
cagctggatgccattcgcttctactaccgtgcccgagtgtgcgagactccccgggcaatc
gaagccagaaccactgattgggtcccagcccgtgaaactggggagaagatccatgcagac
cccactgtgggcttctggtgcctcaatgaggagcagggtcatgaacgcaactgctccaac
tacgcagtccgcttcctctgtcccaaagataacaatgtgaacattcaggctacctggggt
ccatggtcagactggagcccatgccctgccctttgtggtcaggtcggggtccaagtgcgc
tccagaaactgccaatctcaatctaggccttgcagtgggtctaaagcggaaaggagagga
tgcaatggaccggagtgcctgaaatcagattgctccctgcagtgtgtgatggggaaggta
aatgcagagtgtgatgcatgcatgtgcgaagaacacatcctgctgggttctgttcgtggt
gccgggggtctcactgctgaagggtctaccatccttcgctctggcaaactccttaccctt
accgatcacaatggacatttccgcattcctggtatctgccctgatggcaacaccaccctg
acagtcagcctgcagggtcacatcacccacagcgttgttgtgccccacagtgctgaacgt
atctctgtcctcagtgtccagctaaaaagaactgagaaacttcgtgtgctgagcaaccct
gagagcaaggtcaggagagagggacaaactgctgccttctgctgcaaagtggcaggaact
ccaccacctgacaagtaccaatggtttcataacaacagtctcctggagaagcagtctgag
agcaccttggtcctaaagcatctgcgtcctgagcacactggggagtaccactgcagagca
agtggtccatctggggctattaagaccaaacctgctacactcaaaatcttaggtagagat
gagctttcatgtaatcccaagcctgaatcccacctcatccatcttccacttgactgctat
caaaacagcacagactccttctactacgacgtgggcaagtgtccctcaagtacatgtgca
ggacagctggacaatgtcatcaggtgcaaagacaatttggcttattgttgtggtgtgcaa
aagatggagaagaggcagctcacatgccaggactaccaactgccagctatggtggtgact
gagtgtggctgccagaaatgtgtggacaccaaggcaattgtgcacggtagggccattgca
gcagacaatggtgaaccaatgaggtttggccatatctttatgaatggagtcagaatcagc
cgcacaggctacaagggtacattctccatccaggtgcctccagacacagagaggcttgtt
ctgacttttgtggacaacatgcagaaatttgtcaacaccacaaaggtactcccatttaac
accaagggaggggctgtttaccatgagatcaaacttctaagaaagaaagctcctgtgacc
atcagctctacagaaatcaacactctggagctgggggaggtagagggccaggaggcaatg
gttcaaatccagatccctcccaattctttctatacagaaaaaggggaagtcttcactggt
aacgtaaatgctagcttaacgttcctcgaccccagagacgtctccacagctgcagcagct
caaagtgatctaaactttgtaggagaggaaggtgataccctgccgctgagaacctacggg
atgttctcagttgactttaggggtgaggaaaacaatgagcccctgaatgcaggtgaagtg
aaggtgtttctggattctgcccaggtgaagatgtctgagcacctcagtaccatgaagctg
tggtcgctgaaccctgaaactggcctatgggaggaagaaggaagtctgcagatagagaag
aaaagaagaggcaaaagggaggagagaacctttctgattggtaacatggagatcagagag
agacgcctttttaacctggacgtcccagagaaccgcaggtgttatgtgaaagtgagggcc
tttcgcagtgagcgcttcatgcccagtgagcaagtggagggagttgtagtgagtctcata
aacatggagcccacatctggcttctcgtctaacccacgtgcctggggccgctttgatagt
gccgttaccggccccagcggtgcctgtcttcctgccttctgtgatgaacaaaaagcggat
gcctactctgcctatgtcatggccaatctcggaggagaggagctggaggctgtcccttct
gctcccaaactcaatcccaacctcattggagtaccccagccattcctgggtaaaatgaac
tacaggcggtctgaccatgaagactccagagtgaagaagacagcattcagcatcagtgtg
gcaaaaccaagccccaacacagctgaggaaggcaacggaccagtgtacgcatttgagaac
ttgaaagaatgtgaggaggccccattcagtgcagcacacttccgctttncaagagtagaa
ggagaccgctacgattacaacacagtgccgttcaatgaagatgacccaatgagctggaca
caagactacctgagctggtggcctaagcctatggaataccgggcctgctatatcaaagtc
aaaatcaacagcccacatgagatcaatgtgcggtctcgaaacatgggtggcacccacccg
aaaacagcaggccaactgtacggtctcagagacactcgcagcatccgtgacatggaccag
gcaactctttcagctgtgtgcctggagttcaagtgcagtgggatgctgtatgatcatgac
cgtgtggatcgtaccctggtgaaggtaattcctcaaggaagctgtaagagagatcatgtc
aaccaaatacttcaggagtatctggtcaaccacctgcccttagcagtcaacaatgacacc
aatgagttcaccatgctagcacctcttgaccctctgggccataactatggaatttatacg
gtgacagaccaggatcctcgcacagctaaagagattgcacttggacgctgctttgatggc
acttctgatggtacatctcgagtcatgaagagcaatgagggcgtagcgctgacgttcacc
tgcggagatcatgacgcgacacgtcagagtgcctttcaggcagtacaaagtcctcaaggt
cagataataacaagtgtggtgagagaaggcagacagaacaaacgccggcagagggccaac
gcaccccgcagcagtcgtagacgtagtgccagaaatcctacaggaagacgtgcagccaca
agctaa
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integrated database retrieval system
