Micropterus salmoides (largemouth bass): 119890186
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Entry
119890186 CDS
T07309
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119890186 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119890186 (cstf3)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119890186 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
119890186
NCBI-ProteinID:
XP_038557240
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSTEGTADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAALLPETVVAPSTPALKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETVDAAVELIT
GRQPDAGGEGNGSMENHAIAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagggaacagccgaccaggctgcggcagagtatattccagagaaggtgaag
aaggcagaaaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacttatgagcgacttgtcacg
cagttcccgagttctggcagattctggaaactattcattgaagcagagatcaaggctaaa
aactatgacaaagtagaaaagttgtttcagagatgcctaatgaaagtcttgcacattgac
ctgtggaaatgctacctctcatatgttcgagagaccaaagggaagctgcctagctacaaa
gagaagatggcccaggcgtatgactttgcgctggataaaattggaatggaaattatgtct
tatcagatttgggtggactacatcaacttcctcaaaggagtagaggctgtgggctcatat
gcagagaaccaacggatcactgcagtacggagggtgtaccagagaggctgtgtgaacccc
atgatcaacattgagcagctctggagagattatagcaaatatgaggagggaatcaatgtg
catttggccaaaaagatgattgaggatcgaagtagggactacatgaacgccaggagagtg
gcaaaggagtatgagactgtgatgaaggggttggacaggaacgcgccctcagtaccaccc
cagaactctcctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggaa
aaaagcaacccattgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggtgcttggccaccatccagacgtatggtatgaggcagcacag
tacctggagcagtccagcaaactgctagcagagaaaggggatatgaataactccaagctg
tttagtgatgaggcagcgaacatctatgaacgtgccattgggactcttctgaagaagaac
atgcttctgtatttttcatttgctgactatgaagaaagtcgcatgaaatacgagaaggtc
cacagcatctataataagctgctggccattgaggacattgaccccacgctggtctacatt
cagtacatgaagtttgccaggagggcagaggggatcaaatctggtcgcaccatcttcaaa
aaggcccgagaggatctacgcacacgtcaccatgtgtatgtgacggcagcgttgatggag
tactactgcagtaaggataaatcggtggctttcaagattttcgagcttggtttaaagaaa
tatggcgacattccagagtacatactggcatacattgattacctctcacaccttaacgag
gacaacaacaccagggttctgtttgaacgtgtcctcacctcaggaagcttgtcacctgaa
aagtcaggcgagatctgggctcggttcctagcttttgagagcaacataggagacctggcc
agtattctgaaagtggagcgcaggcgattcactgccttcaaggatgagtacgaaggcaaa
gaaacagccttgctagtagataggtacaagttcatggacctgtatccctgctcggctagt
gagctcaaggcccttggatacaaggacgtgtctcgtgccaaactggcagcgctgctccca
gagactgtggtggcgccctctacacctgcactaaaggatgaagctgaccgtaaacctgag
taccccaaacctgacaccaatcagatgatccccttccagccacgtcacctcgcccctcca
ggtttgcaccctgtccctggtggagttttcccagtccccccagctgctgttgtcctaatg
aagctgctccctccacctacgtgcttcactggtccctttgttcaagtggatgagcttatg
gaaacattcaggagatgcacacttcctgagactgtcgatgctgctgtagagctgatcact
ggtagacagcccgatgcaggaggggagggcaatggatccatggagaaccatgctattgcc
aagtcactcaagaggcctaacgctgactctgacgaggaggatgacaaaggagctgtggct
ccgcccatacacgacatctaccgcgcacgccaacagaagaggattcgataa
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integrated database retrieval system
