Micropterus salmoides (largemouth bass): 119890324
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Entry
119890324 CDS
T07309
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msam00535
]
119890324 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
msam00537
]
119890324 (gpc6a)
Proteoglycans [BR:
msam00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
119890324 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
msam00537
]
Others
119890324 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Serglycin
Put_Phosphatase
Motif
Other DBs
NCBI-GeneID:
119890324
NCBI-ProteinID:
XP_038557458
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MYAMWRLQVALCTLSVLSLSSAGESKARSCSEVRQAYNVKGFSIVNVPHQEISGEHLRVC
PQGYTCCTSEMEDKLNQQSKLDFENLVEESSHNMRTTFVSRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
VPACVRALTKMLYCPYCRSMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVAD
RLEGPFNIEAVIEPVDIKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGIGRSARGISDVF
SARFRPYTPEERPTTAAGTSLDRLRVVWRTMQHSVIDIKEKLKESKKFWSNLPDDICAKG
KLTESDEEQCWNSHTKGRYFPEVVKEGLTNQLNNPEVDVDITRPDTLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAAAA
AGKSLSRGPSLLLLLVALTLPLWAMQTQWR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaagtcgccttatgtactctgtcggtgctgtccctgtca
tctgctggtgaaagcaaagcgcggagctgtagcgaggttaggcaagcttataacgttaaa
ggcttcagcatcgtcaatgtacctcatcaggaaatatcaggtgaacacctgcgtgtctgt
cctcagggatacacctgctgcacatctgagatggaggacaaactcaaccaacagagcaaa
ctggattttgagaatttggtcgaggagagcagccacaatatgaggacgacgtttgtctcg
aggcataaaaagtttgatgagtttttcttggagctgctggacaattctgagaagtctctc
aacagtatgttcacacggacgtacgggaagctgtatatgcagaactcggaggtgttccag
gacctgtttactgagctaaagcgctactatacggggggcaacgtcaacctggaggagatg
ctgaatgacttctggtccaggctgctggagcggatgttccagttactcaactcccagtac
cacttcacagacgactacctggagtgcgtcagtaaatacacagatcagctaaagcccttt
ggagatgtgcccaggaaactgaaggcccaggtcaccagggccttcatcgctgcacggaca
tttgtacaggggctaatggtgggtcgggaggtcgccaacagggtcgccaaggtgaatgta
gttccagcatgtgtcagagccctgaccaagatgctgtactgcccatactgtcgcagcatg
cctgggctgaaaccctgtcacaactactgtcacaacgttatgaggggctgtctagcgaac
caggcagacctagatgctgaatggaacctgttcatcgatgctatgttactggtggcagac
agactggagggacccttcaacattgaggcagttatagagccagttgacatcaagatctct
gaggctataatgaccatgcaggacaacagcatgcaagtgtcagccaaggtttttcaaggg
tgtggccaaccaaagccatcaggaataggcaggtctgcacgtggcatctcagatgtgttc
agtgctcgcttcagaccctacacccctgaggagaggccaaccacagcagctggaacaagc
ttggatagactgagggttgtgtggaggacaatgcaacacagtgtgattgacatcaaagag
aaattgaaggaatccaagaagttctggtccaacctgccagatgacatctgtgccaagggc
aagctcacagagtctgacgaggagcagtgctggaacagccacactaagggcagatatttc
cctgaagtggtgaaggagggtctaaccaaccagttgaacaacccagaggtggatgtggat
atcaccaggcctgacacactgatacgacagcagatcatggctttacgtgtcatgaccaac
aagctaaagaacgcctacaatggaaatgacatctacttccaggactctagtgacgagggc
agtagttctggcagtggcagcggatgctctgacggctgcacaacagagtttgtttttgtt
ggaacagaggctcctgtgatcggagcagacagaagtgatgaacgcgcagcagcagcagcc
gcaggcaagtcactttcccgtggaccctccctactgctgctgttagtggccctcacactc
ccactctgggcaatgcagactcaatggagataa
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