Micropterus salmoides (largemouth bass): 119890412
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Entry
119890412 CDS
T07309
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119890412 (chd9)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119890412 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
119890412
NCBI-ProteinID:
XP_038557606
LinkDB
All DBs
Position
Unknown
AA seq
3022 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEDGFPSAPSLVDELNLSADFEPLQVEPLGPVKHQDMIPPVST
HQAMPTYSEPMCHYIGNKAQNPMGQAFSGPGGTGSGGGTGMIADQHGQYHGAAMSQVPQS
NGLFCNSSSPMWGNQDQNGNMYHPLSQQQQQQLCHQQQQQLHNQQLHVGQQQAQQQQHHR
HQQQEQQHRMRQQQLQLQQQQSHQQQLLNQHQQINTQTMSLQQQRHNFSFHQGDQSQSQH
QVHHTLPQVQHQLTVGGARFHSRALPSKAYLDSQNASLSGTCLQPQQQQGSYQLSRGGQA
FSGSGPEDSNLPFPMHSSSMVHSLPTCSVTSAAVYQPAQYPAYPGELEIPSLSQQSLPSA
SVSRPATTTAPLTSTVPELSGAVCQFPSIAVMSPQHTRTPVSQGEECPFQALRCSGETQG
NCKSSEMFGESMCCYPSMVSQLPSEQPQSCGAINTNGYQALGDNLLPSDAQDGDLVGLEA
PDLLPDLLPQLEAALSQPDESNCSWADSNQERGHEHRKPPPVEYKEEKPRKNANGPGSQV
RVLSPPMKSSSSSSSSSSSSSSSSSSSSEKRTPRRTHHQMESNLLDKQEKANRIISEAIA
KARQRGEKNIPRVMSPESFPSSSSQYKMHHDRKHKGNGKARPKEKVCRKACIVPSSKPKQ
KAKIGKIVIKIGKKKKRKPQSSEEESDDDHPSRHTSKDDDSKRRSNRQVKRKKYAEELEA
RLSDEEVKVIVKAKKTNTAASKQPALQLFVENPSEEDAAVVDKIMSSRIVKKELSPGVVV
EVEEFFVKYKNYSYLHCEWATEQHLEKDKRIQQKIKRFKMKQAQRALFFADMEEEPFNPD
YVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAAK
SDSRRVERPPTNLWKKREQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGK
TIQSITFLEEIHRVGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQY
EMYFRDAQGRVIRGAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLE
GFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQ
GILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMP
NLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPSAFDFHLQAMVQSAGKLVLIDKLL
PKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPESER
FVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNS
YEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGAGGGAAQQQLSKKEIEDLLRRGAYGAI
MDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWD
KWAKKADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGNSDSDDTKPKLRRN
HDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLSYCLVHY
RGDDKIKSFMWDLIAPSEDGRTKELQNHLGLSAPVPRGRKGKKAKTQSSSFDIHKAEWLR
KHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSEAQKVLDGVDSSEIKIWVP
EPDHSELPALWWDTISDKCLLLGVYKHGYEKYNTIRADPNLCFIERVGRPDEKAIAAEQR
GNDFMDGDVDDPEYKPAPALLKDEMEDDASSPGDLVVTDNAGDAVPLTGGETVYWPSSSV
LTARLRRLITASQRFTKSRQILHIHQSQSQSQSQSTMILSAPLCPLPPTLNNTLNPKMAA
KIERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAF
TAMCRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHSLLFERL
SLCQMSSDLPVWWETGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKATP
QQSRTSTPLLHPQGQAISSVLTGSPLPPPAQRDTEPCGLAPKVEPVSEGEEAREKQGESW
SPPPAPATPTGLEEKPFSEMRDSERQMVAARTKPLTPNSSERKPKKASKRGRREARRGSE
SDSDGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCTSGSSSSSSSSSSSSDSESEG
QEGKKKKVPAATSVKGFDEDSVASLSTTQDETQDTHVAENGITNNSSHPFQGGGYMLAAS
YWPKDRVIINRLDSICQAVLKGKWPGTRRIYEPGGAVASFYTTKLLDNANSLCEDPSASP
QGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYLARLHEL
QSASDTGLADITKPQCSFPSVLPDLTSQMRLNGALDGQPVVKRRRGRRKNVEGVDLLFMN
RSRAPAVPDQVPPGWGGIGQVGVAVAPVPGYSQSSSQVPVDTDSRVPVINLKDGTRLAGD
DAPRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNS
LTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMF
DRILTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAAAATPTPNPATSALSLNPLMANGLLS
GMDLSSLQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLG
MGSMLGKPAQEGTGGSDEMAKGTASGIIGEPSASKGPSHTSHTKGERTEGSNTTPSSTSS
STSSATAPQSASAASAASSHSLSLNPLLLSSMLYPGMLLTPGLNLPVAATQLQSSNSDPT
LPPAPPPPAVSQSSPQETERPAAENDEALEEALDEEEEEEEEESAEQKENSGPEGSGKAE
SSSSESGSSSSSSEDSDSSDED
NT seq
9069 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccaacctctttgttggaggtttggaagggctggacgaggat
ggcttcccctcagcaccatcacttgtggatgagctaaacctcagtgctgattttgagccc
ctccaagtggagcctctgggcccagtgaagcaccaagacatgataccaccagtttctacc
catcaagccatgcccacttacagtgagccgatgtgtcactacattggcaataaggcacag
aatcctatggggcaggcattttctggtcctgggggcacaggtagtggtggcggcactggt
atgattgcagatcaacatggccagtaccacggtgctgccatgagtcaagtacctcaatct
aatgggctgttctgtaatagtagcagtccaatgtggggcaaccaagaccagaatgggaat
atgtatcaccctttatctcaacagcagcaacaacagctttgtcatcagcaacagcaacaa
ctgcacaaccagcaacttcatgtcggacaacaacaagcacagcagcagcaacaccaccgt
catcaacaacaggagcagcagcatagaatgcggcagcagcagctgcaactacaacaacag
caaagtcatcagcaacagctgttaaaccagcaccaacaaattaacacacagactatgtcc
ctgcagcagcagcgtcataatttttcttttcaccagggagatcaatctcagagccaacat
caagttcatcatactctgccgcaggttcagcaccaattaactgtaggaggagcaaggttc
cattcaagggctctgccaagtaaggcttatttggatagtcaaaatgcttctctgagtggg
acttgcttacaaccacagcagcagcagggtagctaccagttgagcaggggaggtcaagcc
ttctctggatcaggaccagaagactctaacctgccttttcccatgcattcgtcatctatg
gttcattccttgcccacatgctcagtcacttctgccgctgtttaccagccggctcagtac
cctgcctaccctggagagctagaaatacccagtctcagtcagcagtctttgccctcagcc
tcagtgtctaggcctgccaccaccactgcacccctcacttctacagtgcctgagctctca
ggggcagtatgtcagtttccttccatagcagttatgagtccacagcacactaggacccct
gttagccagggagaggaatgccctttccaggctctacgttgttctggtgaaacccaggga
aactgcaagtcatcagagatgtttggtgaatctatgtgctgctatcccagcatggtcagc
caactgccctctgagcagcctcagagctgtggggccatcaacactaatggataccaagca
ctgggagacaacctcctgccatcagatgctcaggatggagacttggtgggcctggaggct
cctgacctcctgcctgacctactgccccagctggaggctgctctcagccaaccagatgaa
tccaactgttcctgggctgattctaaccaagagaggggacatgagcacaggaaaccgcca
cctgttgagtacaaagaagagaagcctcgaaagaacgctaatggtccgggtagccaggta
cgggtcctcagtcctccaatgaagagcagctcatcgtcttcctcctcttcctcatcgtct
tcatcctcatccagctcctcatcagagaaaaggacgccacggaggacacatcatcagatg
gagtcaaatctactggacaagcaagagaaggccaatagaataatatcagaggctattgct
aaggcacggcagcgcggagagaaaaacatccccagagttatgagccctgaaagcttcccc
agctcttcctcacagtataagatgcaccatgaccgcaaacacaaaggaaacggcaaggca
cggcccaaagagaaggtctgtaggaaggcctgcattgtaccctcctccaagcccaagcag
aaggccaagatcgggaaaattgtcatcaagattgggaaaaagaaaaagcgaaagcctcag
tcttcagaggaggagtcagatgatgaccatccctctcgacacacttctaaagatgacgac
tctaagaggcgatctaatcggcaggtgaagagaaagaaatacgctgaggagctggaggct
aggttgtcggatgaagaagtcaaggttattgtcaaagccaagaaaaccaacactgcagca
tccaagcagcctgctcttcaactctttgtagagaatcccagtgaagaggatgctgctgtt
gttgacaaaatcatgtcctctcgtattgtcaagaaggagctctctccaggagtggtggtc
gaagtggaggagttttttgtaaaatacaaaaactactcctacctacactgtgagtgggcc
acagagcagcacctggagaaggacaagaggattcagcagaagatcaaacgtttcaagatg
aaacaagcacagagggcactcttctttgcggatatggaagaggagccctttaaccctgac
tatgtagaggtggacagagtgctggaggtgtcatattgtgaagacaaagacacaggagag
gaggtggtatactacctggtgaagtggtgctctctgccttatgaggacagcacctgggag
ctaaaggatgacgtagatcagagcaagattgaagagtttgagcagctgcaggcagccaag
tcagactcgcgcagggtggagcggcccccaaccaatctgtggaagaagagggagcagtca
agggaatacaggaatggcaacagcctcagggactaccagctagagggggtcaactggctc
ctctttaactggtacaacagacgaaactgcatcctggcagatgagatgggcctgggaaag
accatccagtccatcacattcctagaagagatccatcgtgtgggcattaaaggtccattc
ctcatcattgccccgctctctaccattgccaactgggagcgcgagttccgtacttggacc
catctcaatgtgatcgtctatcatggaagcatggtcagcaggcagatgctccaacagtat
gagatgtatttcagggatgcacagggccgtgtgatccgaggtgcctacaggttccaggct
gttatcaccacgtttgagatgatcctaggaggttgtcccgaactcaacgccatagagtgg
cgctgtgttatcatcgatgaggcccaccgcttgaagaacaagaactgcaagctgctagag
ggcttcaagctcatgaacctggagcataaggtcctgctgacgggtacgcctctccagaac
acagtggaggagctcttcagcctgctccacttcctggagccggcacgcttcccatcagaa
aacaccttcatgcaagagtttggagacctcaagactgaggagcaggtacagaagcttcag
ggcatcttgaagcccatgatgctgcgtcggttgaaggaggacgtggagaagaagttggcc
cctaaggaggaaaccatcatcgaggttgagctcaccaacattcaaaagaaatactatcgc
gcaatcctagagaagaacttctctttcctggctaaaggagctggccaggcaaacatgccc
aacctggtcaacactatgatggagctcagaaagtgctgcaaccacccctacctcatcaaa
ggggcagaagagaagatcctagaggacttcagggaggtgtatagtccctctgcattcgac
tttcacctgcaggctatggtgcagtccgccgggaagctggtcctgattgacaagctgctg
cctaagatgaaggccggagggcacaaggttctcatcttctcccaaatggtgcgctgcctg
gacatcttggaagactacctcattcagagaaggtacttatatgagcggatagatggacgt
gttcgtgggaatctgcgtcaggcagctatcgaccgcttcagtaagcctgaatcagaacgc
ttcgttttccttctgtgtacaagagctggtggcctgggaatcaacctcacggcagcagac
acatgcatcatctttgactctgactggaacccgcagaacgacctacaggcccaggctcgg
tgccatcggatcggtcagaacaaggcagtgaaggtgtaccgtctgatcaccaggaattca
tacgagcgagaaatgtttgatcgcgccagcctcaagctgggcctggacaaggcagtgttg
cagagcatgagtggccgagataacagcctgggaggaggcgccgggggaggggcagcacaa
cagcagctgtctaagaaggagattgaggatctgttgcgacgtggcgcgtacggggccatc
atggatgaggaggatgaaggggccaaattctgtgaggaggacattgatcagatcctccag
cgcaggacaaagaccatcactattgagtctgagggaagggggtccacctttgctaaggcc
agttttgtggcgtccggaaaccgcacagacatctctctggatgaccccaacttctgggac
aaatgggccaaaaaggctgacattgatatggagatggtcaatggcagaaacagcttggta
attgacactcctcgtgtcagaaagcagacaaggccgttcagtgccaccaaggatgagttg
gcagagctttcagagggcaacagcgacagtgatgacaccaaacctaagctcagacgtaac
cacgaccgcctcaacagctatggacgcacagagtgcttcagagtagagaagaacctgctt
gtttatgggtggggccgttggaaggatattctcaaccatggccgttttaagaagcagctg
acagagtgggatgtggagtccatctgcagggccctgctctcttactgcctggtccattac
cgtggagatgacaaaatcaaaagcttcatgtgggacctgatcgcccccagtgaggacgga
cgcaccaaggagctgcagaatcacctgggtttatctgccccagtccctcggggcagaaag
ggtaagaaggcgaagacccagtccagctcttttgacatccacaaagctgagtggcttagg
aaacacaacccagagcacatgcttcaggacgatggctacaagaaacacctcaaacaccac
tgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtgatagga
agcgaggcccagaaggtgctagacggcgtggactccagtgagataaagatctgggtgcca
gaacctgatcattcggagctgccagccttgtggtgggataccatctctgacaagtgtctg
ctgttgggtgtctataagcatggttatgagaagtacaacactattcgtgcagaccctaac
ctgtgcttcatagagcgtgtgggacgaccagacgagaaggccatcgctgccgaacagaga
ggcaatgatttcatggatggtgatgtggatgatccagaatacaagcctgctccggcccta
ctgaaggacgaaatggaggatgacgcctcttcccctggagacttggttgtcactgacaac
gctggagatgcagttccattgacgggaggtgaaactgtctactggccctcatcctcggtg
ctgacagccaggcttaggcgtctgatcacggcctcacagcgcttcaccaagagccggcag
atccttcacatccaccagtcccagtcccagtcccagtcccagtcgaccatgatactgtct
gctccactttgcccgctgcccccgacactcaacaacaccctgaaccccaagatggctgct
aagattgagcgccaacaaagatggaccaggcgagaagaggctgacttctaccgtgtggtt
tccacctttggtgttgtttttgacccaaaccttggccggttcgactggaccaaattccgg
gccatggctcgcctgcacaagaagactgatgagagcctgcagaaatacctgtgtgctttt
accgccatgtgccgtagggtgtgccgcctgccacccaaagagggagactctgcagtggac
ccatctctgacaatccagccaatcacagaggagcgagcgtctcgcaccctgtacagagta
gagttgcttcgccaggtgagggaacaagtccttcgccattcgttactctttgagcggctg
tcgctgtgtcagatgagctctgacttacctgtctggtgggaaactggtacccatgaccgt
gacctgctaattggtgctgccaagcacggggtcagccgcacagattaccacattctgaga
gaccctgagctgagcttcatggctgcccaacgcaactacagccaaacaaaagctacaccg
cagcagtcacgcacctccaccccactactacaccctcagggccaggccatcagctcagtg
ttgacaggctctccactgcctccgcctgcccagagagacacagagccctgtggattggca
cccaaagtggaaccagtgtcagagggggaggaggccagggagaagcagggggaaagttgg
agccctcctccagcaccagctactcccacaggtctggaggagaagcctttttctgagatg
agggacagtgagaggcagatggtggcagcacgtaccaaacctctcacgcccaactcctct
gagaggaaacccaagaaggccagcaagaggggccgcagggaggctaggcgtggctcagag
tccgactcagatggctcctcctcaagctcctcatcgcgctcctcttcctcttcgtcatca
tcctcttcttcctcatcacattccgggtccagctcctcctcctcttcatcgtcttgcacc
tctggctcttcgtcatcatcgtcctcttcgtcatcatcttctgacagcgaaagtgaggga
caggaagggaagaagaagaaagttcctgcagcaacaagtgtaaagggctttgatgaggac
agtgtggcatctctgagcactacacaggatgaaacacaagacacccacgtggctgagaac
ggcatcaccaacaactcctcacaccctttccagggaggaggatacatgctggctgcatcc
tactggccaaaggaccgtgtgatcatcaaccgcctggacagcatctgccaagcagtgcta
aagggcaagtggccaggaacacgtcggatctacgagcctggaggtgcagtggcctccttc
tacaccaccaagctgctggacaatgccaacagcctgtgcgaggacccctctgcctcgcca
caggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactgaac
gatcaggaaggaggtctgaagttgaccttccagaaacaaggtctacccctgaagaggccc
ctggagtcagaggagggccctcaggcccagcagcagtacctggcccgtcttcatgagctg
cagagtgcctcggacacaggcctggctgatatcaccaagcctcagtgcagcttcccatct
gtgcttccagatcttacaagtcagatgaggctgaatggagcgctggacggccagccagtg
gttaagaggcggagaggaaggaggaagaatgtggagggggtggacctgctcttcatgaac
aggagtagagcccccgctgttcctgatcaggtgcctccagggtggggtggtattggccag
gtgggggtggctgtggcccctgtgccgggctatagtcagagctccagtcaggtccccgtg
gacactgacagcagggtcccagtcatcaacctcaaagatggcacccgacttgctggggac
gacgcacccaggaggaaagatctagaacagtggctaaaagagcaccctggctttgtggcg
gacacaggagcctttattcctggggtaaataagatgcagatgcagttccacttccaggac
ggtcggcccaagcagaagaggcaccgctgcaggaaccccaacaagatcgatgtgaatagc
ttgacaggagaagaaagggtccagatcatcaacaggagaaatgcacgcaaggttggtgga
gcctttgctcctcccctgaaggatctctgccggttccttcaggagaaccccgagtacgga
gtcccacctgaatgggctgatgttgtcaaacagtcgggttacctcccagagagcatgttt
gacaggatcctgacaggacccatagttcctgaggaggtgagtcgacgtggacgtcgacct
aagaatcctttggccaaggcggcagcggcggcggcggcggcggcggcagcaacaccaaca
cccaacccagcaacctccgctcttagtctgaaccccctgatggccaacggtcttctctct
gggatggacctgtccagcctgcaggccttccagcaaaacctccagagcttgcagtccctg
cagctcaccgcgggcctaatggggctgccgtcagacgcgagcaacctggctgcaagtaac
ttagctgccatgtttcccatgatgctgtctggtatggctggattgccaaacctgcttggc
atgggcagcatgcttgggaagcctgctcaggaaggcaccggaggctctgacgagatggca
aagggaaccgccagtggcataataggagagccgtctgcctctaaaggcccctctcacact
tcacacaccaaaggagaaaggacagagggctcgaacacgactccttcctccacttccagc
tccacttcctctgccaccgccccacaaagtgcttcagctgcctctgcagcctccagtcac
tcactgtctcttaaccccttgttactctccagtatgctttacccagggatgcttctcact
ccaggccttaaccttcctgtggctgccacacagctgcagagctcaaacagtgaccccacc
cttcctcctgctcctcctcctccggcagtctcccagtcatcgccccaggagacagagcgg
ccagcggcagagaatgacgaggcgttggaagaggctttggacgaagaggaagaggaggag
gaggaggagtcagcagaacaaaaagagaacagtggtcctgaaggttcggggaaagcagag
tcatcttcatcagagtctggaagctcttcttcctcatcagaagattcagactctagtgat
gaggactga
DBGET
integrated database retrieval system
