KEGG   Micropterus salmoides (largemouth bass): 119890443
Entry
119890443         CDS       T07309                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msam03036]
    119890443 (wdhd1)
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    119890443 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid WD40_Prp19 Ctf4_C WD40 HMG_WDHD1 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 HMG_box WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N eIF2A Beta-prop_WDR19_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_Vps41 TFIIIC_delta Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st KNTC1_N DUF6476
Other DBs
NCBI-GeneID: 119890443
NCBI-ProteinID: XP_038557657
LinkDB
Position
Unknown
AA seq 1132 aa
MPCERKPMRYGHSEGHTEVCFDDSGKFIVTCGNDGDVRIWESLDDDDPKFITVGEKAYSL
ALKNGKLVTASSNNTVQIHTFPDGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVTFDPKDDFLASAGCDGSVVVWNIEEQTQLISWPLLQKT
NDISNAKSLCRLAWQPGTAKFLAVPVETKVHLYERGSWDHVSTLSDDLLTQPINVVAWSP
CGQFLAAGSVGGSLTVWDVNSKLCMERQKHEKGFTVCGLAWHPSGSQIAYTDTEGCLGLL
DGLSTSITNTSTTKQAPVKKPAKDYDDLFDDDDDDRLMDEGLSDTNSPVKKPVAGDDDDD
DDFLMPATGRVRNRGAILDDENSRDTGSLRLGQDRFGDDDDTGSAVVPAAAPLVPLRPVY
EGPTPTPPQKAFQPGSTPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAVHHAMHL
TNSLGHTMADLSQEAVLLACPSTDELASKLQCLHFSSWDTNKEWMVDLPKGEDARALCLG
QGWAAVATSTLMLRLFSIGGVQREIFSLQGPVVCMVGHGEQLLIVYHRATGFDGEQALGV
QLLQLGQKKRQLINGEPLPLSQKSYLSWLGFTAEGTPCYVDSDGVVRMLNRSLGNTWTPV
CNTRETCKSKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTSTE
KGLMEEQFWRSVLFHNHYSFLSSSGYEINEDAQTQSQKEQQELLMKMFALSCKLEREFRC
VELAELMTQNVVTLAIRYASRSRRMALAQRLSEIALEKSNQIQEEEPEEQEEEPEYSSIR
QTSGYGRSSVTGGRYSNRRNQEEEEEQGEELREDEDGQEMETEEAAETRKRVNPFAKEAS
SPVKPSLTPIGKVGRANPFKVLGSGKPASLSGHPRVTNILDNMTSSKKSAPLSGSAAKPN
KGPVLKPLAPRPKTKTQSTLLQMTGTKAANKKPQENTEPAADQQKQPDVPPPASPADNVE
NKRPKTGFQLWLDENRKSIIADHPDLEETDVIKEAMGRFRTLSAEERLSWTERAKGQTGD
AADLKKRKRAEGVGGGGAENENGQAEADENSAKKKKSLDPSSKLSAFAFNKN
NT seq 3399 nt   +upstreamnt  +downstreamnt
atgccttgtgagaggaagccgatgcgctacggccactcggagggacacaccgaggtctgc
tttgatgactctgggaagttcattgtcacctgcggaaatgacggcgatgttcggatatgg
gagagtctggatgatgacgatccaaagttcatcaccgttggggaaaaggcgtactctctc
gcactcaagaacggcaagctggtgacagcaagctccaacaacacagtgcagatccacacg
tttcccgacggcgatcccgatggcatcctgacccggttcactaccaacgccacacatgtc
accttcaacagcagcggctcgagagtcgctgccggatccagcgacttcatggttaaggtg
gtggaggtgtcggacagcagccaacagaaaacactccggggacatgaagcgcctgttctc
agcgtcacctttgaccccaaagatgacttcctggcgtctgccggctgtgacggctccgtc
gtggtgtggaatattgaggagcagactcagttgatcagttggcccctgctgcagaagacc
aatgacatcagtaatgcgaagtctctgtgtcggctggcctggcagcccgggacggcaaag
tttttagcagttcctgtagagacaaaggtgcacctgtatgagcgagggtcctgggatcat
gtgagcactctgtccgacgatctgctgacacagcccatcaacgtggtggcctggtctcca
tgtgggcagttcctggctgctggcagcgtggggggctcactgacagtgtgggacgtgaac
agcaagctgtgtatggaaaggcaaaagcatgagaagggtttcaccgtgtgcggcttggct
tggcatccgtcagggagccagatcgcctacacagacacggagggctgcctgggcctgctg
gacggactcagcacctccatcactaacaccagcaccaccaagcaggcaccggtgaaaaag
ccagcaaaagactacgacgacctctttgatgatgacgatgatgacagactcatggatgaa
ggtctgagcgacaccaactcgccagttaagaaacctgtcgcaggggacgacgacgatgac
gacgacttcctcatgcctgcaaccggacgggtgaggaacagaggggcgatcctggatgat
gagaactcacgagacacaggatccctgagacttggtcaggacagatttggggacgatgat
gacacgggcagtgctgtagtgcccgcggccgcccctctggtgcccctgcgtcccgtctac
gagggacccacgccaacgcctccccagaaggcctttcagccaggctccactcctgcacat
ctcactcaccgcttcatgatgtggaactcggtggggatagtgcgaggatacaatgacgag
caggacaacgccatcgacgtggagtttcatgacacggccgtgcaccacgccatgcacctc
accaactccctgggtcacaccatggccgatctttcccaggaggccgtgctgctggcctgt
cccagcacagacgagctcgccagtaagcttcagtgcctccacttctcgtcatgggacaca
aataaggagtggatggtggatctgccgaagggcgaggacgcgagggcgctgtgtctgggt
cagggctgggcggcggtcgccaccagcacactgatgctcagactcttctctatcggcggg
gtccagagggaaatcttcagcctgcaggggcccgtggtctgcatggtcggacacggagag
cagctgctcatagtctaccatcgggcgacaggtttcgatggggaacaagctctgggcgtc
cagctgctgcagttgggtcaaaagaagaggcagctcatcaacggcgaaccccttccactg
tctcagaaatcctacctatcctggctcggattcactgccgaggggaccccatgctatgtg
gattcggacggggtggtccggatgctgaaccgctccctgggtaacacgtggacaccagtg
tgtaacacccgagagacgtgcaaaagcaaatccgatcactactgggtggtcggagtgcac
gagaaccctcagcagctcaggtgtattccttgtaaaggctccaggtacccgcccacccta
cccagacctgcggtggccatcctgcccttcaagctgccgctgtgtcagacctccacagag
aaaggactgatggaggagcagttctggcgttcagtcctcttccacaaccactacagcttc
ctgtcatccagcggctacgagataaacgaggatgcacagactcaatcccagaaggagcag
caggagctcctcatgaagatgtttgcattgtcctgtaagctggagagagagtttcgctgt
gtggagctggcggagctaatgacccagaacgtggtgactctggccattcgatacgcgtct
cgatccagacgcatggctctcgctcagcggctcagcgagattgccctggagaaatccaac
cagatccaggaagaagagccagaggaacaggaggaggagccagaatactccagcatcaga
cagacctctgggtatggccggagctccgtcacaggaggacgttacagcaacagacgtaat
caggaggaggaagaggagcaaggagaagagctcagggaggacgaggatggacaggagatg
gagacggaggaggcggcagaaaccagaaaacgtgtgaatccgtttgctaaagaagcaagt
tcacccgtgaagccatctctgacgccaattggtaaagtaggacgtgcaaatcctttcaag
gtgctaggctcagggaaacccgcgtctttgtctggtcatcctcgagtgacaaacatcctg
gacaacatgacgtccagcaagaagtcggctccactcagcggatctgcggcaaaaccaaac
aaaggccccgtcctcaaaccgctggcccccaggcccaagacaaagacgcagtccactctg
ctgcagatgactggcacaaaagcagccaataagaagcctcaggagaacacagagccggcc
gcagatcagcagaaacaaccggacgtcccgcctcctgcctcacctgcagataatgtcgaa
aacaagaggccgaagacgggcttccagctctggctggacgagaacaggaagagcatcata
gctgaccacccggacctggaggagaccgacgtcatcaaagaggcaatgggacgcttccgg
acgctgtcagcagaggagcgactgtcgtggacggaaagagcaaaaggccaaactggagac
gcagcagatctgaagaagaggaaaagagcagaaggagtaggaggaggaggtgcggagaat
gaaaacggacaagcggaagcagatgaaaatagtgccaagaagaagaaatctttggatccc
tcctctaagctttcagcatttgcttttaacaaaaactaa

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