Micropterus salmoides (largemouth bass): 119890507
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Entry
119890507 CDS
T07309
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119890507 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119890507 (copb1)
Membrane trafficking [BR:
msam04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119890507 (copb1)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119890507 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
119890507
NCBI-ProteinID:
XP_038557738
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVTSDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLVIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVDNEIKKETGEVKAEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVAIVEDKKKQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNNIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMASKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNDYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTNV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagagaacgtttgttacactctgatcaatgttacatctgattcagagccc
ccttctgaagtcagccttaaagccgatctggaaaagggggagatcaaggcaaagactgaa
gccctgaagaaggtcattatcatgatcctgaatggcgagaagttaccaggactgttgatg
accataatccgcttcgtgctgccacttcaagaccacaccatcaaaaagctgctgctggtt
ttctgggagattgttcccaaaacaaccccagatggcaagctgcttcaggagatgatcctg
gtctgtgacgcatacagaaaggacctgcagcatcccaatgagttcatccgtggctccact
ctgcgtttcctgtgcaagctgaaggagtccgagttgcttgagcctctcatgccagcgatc
cgggcctgcctggagcaccgtcacagttatgtgcgccgcaatgctgtcctagccatttac
accatctacaggaactttgagcatctcatcccagatgctccggagttgatccatgatttt
cttgtcaatgagaaagatgccagctgtaagagaaatgccttcatgatgctgattcatgca
gatcaggatcgagctctggactacctcagcacatgtattgaccaagttcacactttcggc
gacattctccagctggtcattgtggagctgatttacaaagtttgccatgctaacccctct
gagcgcgccaggtttatccgttgcatctacaacctgctgcagtcctccagtccggctgtt
aagtatgaggctgctggcactcttgtgaccctctccagtgctcccacagccattaaggct
gctgcccagtgctacattgatttgatcatcaaggagagcgacaacaatgtgaagctgatt
gtgcttgatcgtctgattgaactgaaggagcatcccactcacgagcgtgtactccaggac
cttgtgatggacatcctgcgagttctcagcactccagacctggaagtcagaaagaagacc
ttgcagcttgcactggaccttgtttcatctcgcaatgtagaagagttggtcattgttttg
aagaaagaggtgattaagacaaacaacgtaacggaacatgaagatactgataagtatagg
cagctgttggtgcgcactctccactcttgcagtgtgcgcttccctgacatggcggccaac
gtcatacctgtgttgatggaattcttaagtgacactaatgaggcagctgctgctgatgtg
ctggagttcgtacgggaggccattcagagatttgacaacttgagacccctcgtcatcgag
aagatgctggaagtctttcacgccatcaaaactgtcaagatctacaggggagcattgtgg
atcttaggagaatactgcagcaccaaggaagacatccagagtgtgatgactgaagtacgc
aggtccttgggagagatcccgattgtagacaatgagataaagaaagagacaggagaggtg
aaagcagaagatgaagtgagtgcagctccagcccagaagctggtgacagagatgggcacg
tacgtgacacagagtgccctcagctcctctaggccttcgaagaaagaagaagatagacct
ccactcagaggcttcctgatggatggagacttctacgtggcagcttccctggccaccaca
ctgaccaaagtggcgttgcgctatgttgctattgttgaagacaaaaagaaacaaaattcc
ttcgttgcggaggccatgctgatcatggtcactgtgctgcacctgggaaagtcctctctg
cccaagaagccaattacagacgatgatgtagaccgcatctcgctgtgcctcaaggtcctg
tcagagtgctcaccactgatgaacaacatttttaacaaggagtgccgcaaatcgctgtca
catatgctaactgtcagactggaagaagagaagctgtcacagaagaaagagtctgagaaa
cggaatgtaacggtgcaggcagacgacccaatctccttcatgcagttgacagccaaaaac
gaaatggcttctaaggaggaccagttccagctcagtctgctggccgctatgggtaacact
cagaggaaggaggctgctgatcccctggcttcaaaactcaacaaggtgacccagctaaca
ggcttctcagacccagtgtatgctgaagcctatgttcatgtcaaccagtatgacattgtg
ttggacgtgctggtggtcaaccaaaccagtgatactcttcagaactgcacccttgagctg
gccactttaggtgatctaaagctggttgagaaaccttcgcctctaactctggctcctcac
gattttgctaacatcaaggccaatgtcaaggtggcttctactgagaatggcattatattt
ggcaacattgtctatgacgtgtcgggagctgctagcgacagaaactgcgtggtactcagt
gatatccacattgacatcatggactacatccagccagcttcctgcaccgatgcagaattc
agacagatgtgggcggagtttgagtgggaaaacaaggtgactgtgaacaccaacatcact
gatctgaatgattacctccagcatatccttaagtccaccaacatgaagtgtctgactcct
gagaaggctctctctgggttctgtggcttcatggctgccaacctttatgctcgttctatc
tttggagaagacgccctggctaatgtcagcattgagaagcccatccacctgggtcctgac
gcgcctgtcaacggacacatacgcattagagccaaaagtcagggtatggccttgagcctt
ggtgacaagatcaacctctcccaaaaaaagacaaatgtctga
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