Micropterus salmoides (largemouth bass): 119890535
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Entry
119890535 CDS
T07309
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119890535
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119890535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_31
HTH_26
AbiJ_NTD3
HTH_24
CUT
HTH_37
Motif
Other DBs
NCBI-GeneID:
119890535
NCBI-ProteinID:
XP_038557775
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MFQQSEEPRFTIEQIDLLQRLRRTGITQVEVLHALDTLDHLDRKHGHKLTHKPSYMPPSS
SSTVAASSSMTSAATQTSFPNNRFSLSPNNNFDTTSPPLPIPVASPVVISAVTQNGLVAV
TNGKLSPPRFPLGVVSDSVTTPGYGFETSEEDIDVDDKVEDLMRRDSAVIKEEIKSFLAN
RRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKTNPGATLAMRAAPL
ALEDVMDWHQAPPPFGSAPGGFRLRRGSRFTWRKECLAVMESFFSDNQYPDEAKREEIAT
ACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVQSPGGQS
NSDEVDGNDFPDQGCEVSLFDKRASARQFGFSRADLSSPTQVPTLLPSWFSALARGGMSG
QRGTSLIGRSLVSGAGPQVEGSRLTGVSWSPPSPSLQDEPTIEPQDPIGLEKAAVHHSNQ
ALANQVDGTRCSMGNDIKTETLEDD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagagtgaggagcctcgcttcaccattgagcagatcgacctcctccagagg
ctaaggaggacggggatcacacaggtggaggtcctccatgccctggacacacttgaccat
ttggaccggaaacatggacacaagttgacccataaaccgtcctacatgcctccctcgtct
tccagcaccgttgccgcctcttcctccatgacttccgccgccactcagacaagtttcccc
aacaaccgattctcactgtcccctaataacaacttcgacaccacctccccgcctctacca
attccagtggcctcacctgtcgtcatttcagctgtaactcagaacggtctagttgctgtc
accaatgggaagctgtcaccgcccagatttcctcttggcgtggttagtgacagcgtgacg
acaccaggctatgggtttgagaccagtgaagaggacatagatgttgatgataaggtggag
gacttgatgaggagggatagcgctgtgatcaaagaggagattaagtccttcctggcgaac
aggcggatctctcaggctgtggtcgctcaggtaacggggatcagtcagagtcggatctcc
cactggctcctacagcagggatcagacctcagcgagcagaagaaacgagccttcttccgc
tggtaccagctagaaaagaccaaccctggtgccactctggccatgcgagccgccccattg
gctctggaggatgtgatggattggcaccaagccccgcctccatttggctctgcccctggg
ggcttccgtctgcggcgagggagcaggttcacctggaggaaggagtgtctggctgttatg
gagagcttcttcagtgataaccagtaccctgatgaagcgaagagagaggagatagccacc
gcctgtaatgctgttattcagaaacccggaaagaagctgtctgatttggagagggtaaca
tctctgaaggtctacaactggtttgccaaccgccgcaaagacatcaagaggcgcgctaac
attgaagcagccatcttggagagccacggcattgaggttcagagtccaggaggtcagtcc
aacagcgacgaggtggatggcaacgacttccctgaccagggttgtgaggtgtccttattt
gacaagagagcttcagcgaggcagtttggtttcagtcgagctgacctgtcctctccaacc
caggttcccacgctgctccccagctggttttccgccctggctagaggaggcatgtctgga
cagaggggcacttctctgatcggccgctcccttgtgtcgggggcgggccctcaggtggaa
ggttccagattgacaggtgtgtcctggtctcccccttccccctccctccaggacgaaccc
accattgagccccaggatccaatcggtttggagaaggctgctgtccatcacagcaaccaa
gccctagccaatcaggttgatgggacaagatgcagcatgggtaacgacatcaagacggaa
acgctggaggatgactga
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integrated database retrieval system
