Micropterus salmoides (largemouth bass): 119890650
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Entry
119890650 CDS
T07309
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119890650 (hcn4)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
119890650 (hcn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
119890650
NCBI-ProteinID:
XP_038557938
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQKASIMGEGEDADKDTRRKSIRMKPLPSPSPTSGVSCKGI
GETKSGESVIMETDIGRPIKTSSNGDCRRFRGSLSSITSRHVHDSDSAEERRLITEGDVT
PSEESPPGANGDGPPDQGAQGASGGGGTQKDSPDQQSGFIKLDGIDQILPDDERLYQAGF
IHRQLGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLM
VGNLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPQQI
KIKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSR
LIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADCWVSK
NKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHA
TALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGEL
NEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMY
FIQHGVVSVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVL
EEYPMMRRAFETVALDRLDRIGKKNSILQHKVQHDLSSGVLNYQENEIIQQIVQHDRDMA
HCAHLLQNAPPQTPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPPTLFRPPVSV
LGSLKDPSSRLKKFHTFVPPSTASGSAGDSSSSTPSKLRTGVDMPLLASFKAQHLTSGTG
ATGSSQQATDSGGQCGPSGVGSGPFGGGASAFPFGPYSSSDSPSSSTAQLHTQPQRQQSF
RSSTPPLSNLFHQGSTGGSTGSGISGGAVGACGGATGWSSGGAVGGSMEGATGGDSAWAG
EDFTTGTTEATPGGHFGFGGAAGGSVGEISGESMIGISDGSVGASCVRLAGGVSGVSLGG
VTSGLIGDGARRSMRGTSKGSIGRASRGSVGGASGESLVVTTTGGSLGLVSGGSMGVVSG
GLTGGVPGGSIGGASVGPLGGVSGDSVVGNHGGSLGRASVGPTTSHIGGGSSGPGGGVIG
GHIGRAAGGVVGSHIGGSTACPVGGTSGGLTAGLISSSRCQSPVSTSSSSPMPSQLLHCQ
PPPKAPQVAPLQQFAGGGRTTSGLNLFHSPSQGSPSSRGQQTQQSAEGSPSSLSYFSLAG
LQSGFLPHQMPLERSALASLAQYGSANASPCLTPVAPSPTIQSPVTGRTFHYSDPSSATG
SDSSMLMPQSFLPSQLPSQPHTTGSDSPLGRFSEDLMLLSHSHPSPPQEVAEALGHQTPR
SYVETGYYPSPFSSPTLLPKPCSSVPGHMTPPIQMSPGHPHQTQSPGASPPLPVRRGSAA
YSSDLEPQAVRSKLPSNL
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggacaggctgcactcctccatgcgtaaaaggctctacagtttgccacagcacattgga
cagaaagcatctataatgggtgaaggagaagacgcagacaaggacacccggaggaagagt
attaggatgaaacctctaccgtcaccgtcgccgacctctggggtaagctgcaaaggcatc
ggggagaccaaaagtggggagtctgtgatcatggagacggacatagggagaccgataaag
accagctcaaatggagattgccggagatttcgaggcagcctctcgtccatcacaagtcga
cacgtgcacgactctgactcggcggaggagaggcgcctcatcaccgagggggatgtcacc
ccgagcgaggagagcccccccggtgctaacggcgatgggccgccggatcaaggcgcgcaa
ggggccagcggtggcggtggtacccaaaaagattccccagaccagcagtcaggttttata
aagttggatggcattgatcaaattctgccggacgacgagagattatatcaagctggcttt
atacacagacagttgggagcaatgcttcaaccaggggtcaacaagttctccctgaggatg
tttggaagtgagaaggcggtggaacgagagcaagagcgggttaaatccgccggtttttgg
ataattcacccgtacagtgatttcaggttttactgggacttgaccatgctgctgctgatg
gtgggcaacctaatcatcatccccgtgggcatcacctttttcaaggatgagcacacgcca
ccctggatcgtgttcaatgtggtctccgacaccttcttcctcatggacctggtcctcaac
ttcaggacgggtattgtcaaggaggacaacacagagatcatcctggacccgcaacagatc
aagatcaagtacttgcggagttggtttgtggtggacttcatctcctccatccctgtggac
tacatcttccttattgtggagacgcgcatcgactcagatttctacaagacggcccgcgct
ttgcggattgtccgcttcacgaagatcctcagcttgctgcgactcctgcgcctctctaga
ctcattcgctacatccaccaatgggaggagatcttccacatgacctatgacctagccagc
gccatggtgaggatagtcaacctgattggcatgatgctactgctgtgccactgggatggc
tgcctgcagttcctggtgcccatgctgcaggacttccctgccgactgctgggtgtccaaa
aataagatggtgaatgacacatggggacagcagtactcctacgcacttttcaaagctatg
agccacatgctgtgtattgggtatggcatgtacccccctgtgggcatgacagacgtgtgg
ctgaccatcctcagcatgattgtgggtgctacctgctacgccatgttcgtgggccacgcc
accgcgctaatccaatctctagactcatctcgacggcagtaccaggagaagtacaaacag
gtggagcagtacatgtccttccacaagctgccagcagatatgaggcagagaatccacgac
tactacgagcaccgttaccagggcaagatgtttgacgaggagagcatccttggagagctg
aatgagccgctccgagaggaaatcatcaactttaactgtcgaaagctggtggcatccatg
cctctgtttgccaacgccgaccccaactttgtcacctccatgctcaccaaactgaggttt
gaggtgttccagcctggagattatatcatcagggagggcaccatcggcaaaaaaatgtac
ttcatacagcatggggttgtcagcgtactaaccaaaggcaataaagagaccaagctttca
gatggttcctactttggagagatttgtttgctgacgcggggcagaaggacagccagcgtc
cgagcagacacgtactgtcgtctgtactcactgtctgtggacaacttcaacgaggtgctg
gaggagtatcctatgatgagacgggcctttgagactgttgccctggacaggctggatcgt
attggcaagaaaaactccattctgcaacacaaggtacaacatgacctcagctctggtgta
ctcaactaccaggagaatgagatcatccagcagattgtgcagcatgacagggacatggcc
cactgtgcccacctattgcagaacgccccacctcagacgcctccctcacccacccctgtc
atctgggcccccctcatccaggctcctctccaggcagcagctgccaccacctcagttgcc
attgccttgacacaccatccccaccttccaccaactctcttcaggcctccagtttctgtt
ctgggatccctgaaggacccttctagccggcttaagaagttccacacatttgttcctcca
tccacagcatctggctctgctggggactcttcctctagcactccctctaaactacgcact
ggggtggacatgccattgctggcttcttttaaggctcagcacttgacgtcaggtacaggg
gcaactggctctagccaacaggccacagatagcggaggccagtgtggacctagtggggtt
gggtctgggccctttggaggaggggcctctgcttttccctttggaccatactcttcctct
gattcaccctcatctagtacggcccagctgcacactcaaccacagcgtcaacagtccttc
cgctctagcaccccacctctctcaaacctcttccaccaaggatctacaggtggtagcaca
gggtccggaataagtggaggggcagttggagcctgtggtggtgctacaggctggtcgtca
ggtggagcggttggagggtctatggaaggagccactggaggagacagtgcgtgggccgga
gaggactttacaactggaaccacagaagcgactcctggggggcactttgggtttggagga
gctgctggtggatcagtaggagagatctcaggggaatcaatgatagggatatctgacgga
tcggtgggtgcttcttgtgtcaggttagcaggtggggtatcaggtgtatcattggggggt
gttacttctgggctaataggagatggagccaggagatcaatgagagggacttctaaagga
tcaataggaagagcttctaggggatcagtgggaggggcttctggagaatcactggtagtg
actactactggaggatcattagggttggtttctggtggatcaatgggagtggtttctggg
ggattgacaggaggagtccctggagggtcaatcggaggggcctctgtagggccacttgga
ggagtttctggtgattcagtggtagggaatcatggaggatcattgggaagggcttctgtt
ggaccaacaactagtcatataggaggaggttctagtgggccagggggtggggtgattgga
ggacatattggcagagcagcagggggggtagtagggagccatataggagggtctacagct
tgtccggtgggagggacttctggtggacttacagctggacttattagttcctcccgttgt
cagagtcctgtatctaccagctcgtccagccctatgcctagtcagcttctccattgccag
ccacctcccaaggctcctcaggtggcccctttgcagcagtttgctgggggaggcaggact
accagtggcttaaacctcttccattccccttcacaaggctccccatctagtagaggacag
caaacccagcagtctgctgagggctcgccatcttccctcagctattttagcctggccggc
ctccagtctggcttcctgcctcaccagatgcccctggagaggtctgccctggcctccctg
gcccagtatggttcagcaaatgcctccccatgccttacccctgtagcgcccagccctact
attcaaagcccagtaacaggcaggactttccactacagcgacccctccagtgccacagga
tccgacagttctatgctcatgcctcagtcatttctcccttcacagcttcccagccagcca
cacacaacagggagcgattcgccactgggccgcttttctgaggacctaatgcttttatcc
cactcgcacccatctccgccccaggaggtggctgaggccttaggccatcaaactcctcgc
tcctacgtggaaactggatattacccctcacccttttcctcacccactcttttgcccaaa
ccctgtagctcagtgccagggcacatgactcctccaattcagatgtctccagggcaccct
caccagactcagtcccctggggcctccccgcccttgcctgtacggaggggctctgctgcc
tattcatcagatctagaacctcaagctgtccgctctaaactcccttccaatttgtga
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integrated database retrieval system
