KEGG   Micropterus salmoides (largemouth bass): 119890756
Entry
119890756         CDS       T07309                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:msam04812]
    119890756
Cytoskeleton proteins [BR:msam04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     119890756
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_WDR19_1st eIF2A Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_RIG_1st VPS8_N Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_LRRK2 PROPPIN Beta-prop_IFT140_2nd Beta-prop_VPS8 Ge1_WD40 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C WD_LRWD1 Cytochrom_D1 PD40 Beta-prop_IFT122_2nd OYE-like_second_a-b
Other DBs
NCBI-GeneID: 119890756
NCBI-ProteinID: XP_038558078
LinkDB
Position
Unknown
AA seq 311 aa
MAAANTTKISWRLQEFEAHSSRVSCLALGKSSGRLLATGGEDCRVNLWAVSKANCIMSLT
GHKNPVECVQFNVSEDQIVTGSQSGSIRVWDMEAAKILRTLMGHKANITSLGFHPFGDFL
ASSSMDTNIKLWDVRRKGYVFRYTGHTQAVRSVAFSPDGKWLASASDDCTVKLWDLTQGK
TITEFKSHTGPVNIVQFHPNEYLLASGSSDRTVKLWDLEKFTMIGSTEGDTTPVRCVFFS
PDGGCLFSGSTDSLRVFGWEPDRCFDVVPVGWGKVSDLAVCNQQLIGVSHQLSSVSSYVV
DLKRVKKSGAP
NT seq 936 nt   +upstreamnt  +downstreamnt
atggctgccgccaacaccaccaagatctcgtggcgattgcaggagttcgaggctcactcc
agcagagtttcctgtttggctctgggcaaaagctccggccgcctgctggccacaggaggg
gaggactgcagggtcaacctctgggctgtcagcaaggccaactgcatcatgagtttgacc
ggtcacaagaacccggtggagtgtgtccagttcaacgtgtcggaggatcagatcgtcacc
ggttcacagtctggatcaatacgagtctgggacatggaggctgccaagattttaaggact
ctgatgggacacaaagccaacatcaccagcctcggcttccacccgtttggagacttcctc
gcctcgagctccatggacacaaacatcaagctgtgggatgtgcgcaggaaaggatatgtg
ttcaggtacacgggtcacactcaggcggtgagaagtgtggccttcagtcctgatgggaag
tggttggcctcagccagcgacgactgcaccgtcaagctgtgggacctgacccaggggaag
accatcacggagttcaaatctcacaccggccccgtcaacatcgtgcagttccaccccaac
gagtacctgctggcgtcaggcagctccgacaggaccgtcaagctgtgggatctggagaag
ttcacgatgatcggctcgacggagggcgacacgactccagtcaggtgtgtgtttttcagc
ccggacggcggctgtctgttcagcgggtccaccgactctctgcgggtctttggctgggag
cccgaccgctgcttcgacgtggtgccggtgggctggggaaaagtctctgacctggccgtc
tgcaaccaacagctgatcggcgtgtctcaccagctctccagcgtgtcgtcctacgtggtg
gatctgaagagggtgaagaagagcggcgctccgtga

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