KEGG   Micropterus salmoides (largemouth bass): 119890918
Entry
119890918         CDS       T07309                                 
Name
(RefSeq) ras-like GTP-binding protein YPT1
  KO
K07874  Ras-related protein Rab-1A
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:msam00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119890918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msam04131]
    119890918
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119890918
   04031 GTP-binding proteins [BR:msam04031]
    119890918
Membrane trafficking [BR:msam04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    119890918
 Autophagy
  Other autophagy associated proteins
    119890918
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119890918
  Exosomal proteins of other body fluids (saliva and urine)
   119890918
  Exosomal proteins of colorectal cancer cells
   119890918
GTP-binding proteins [BR:msam04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    119890918
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA SRPRB AAA_29 AAA_16 RsgA_GTPase AAA_22 AAA_7 MCM Septin ABC_tran AAA_5 TniB NACHT AAA AAA_25
Other DBs
NCBI-GeneID: 119890918
NCBI-ProteinID: XP_038558259
LinkDB
Position
Unknown
AA seq 101 aa
MFSLPLSPRDLFIQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT
IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQVSAS
NT seq 306 nt   +upstreamnt  +downstreamnt
atgttttccctccccctctctcctcgtgacctatttattcaactcctccttatcggtgac
tctggtgttggaaagtcttgtctccttctccggtttgcagatgacacgtacacagagagc
tacattagtaccatcggcgtggacttcaagatcaggaccatcgagctggacggaaagacc
ataaaacttcagatttgggacacggccggccaggaacggttccggaccatcacatccagt
tactacagaggagctcacggcattatagtagtttatgatgtgacagatcaggtcagtgcc
tcttga

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