Micropterus salmoides (largemouth bass): 119891172
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Entry
119891172 CDS
T07309
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119891172 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119891172 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119891172 (usp30)
04121 Ubiquitin system [BR:
msam04121
]
119891172 (usp30)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119891172 (usp30)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119891172 (usp30)
Membrane trafficking [BR:
msam04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
119891172 (usp30)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119891172 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
119891172
NCBI-ProteinID:
XP_038558456
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MLWCRPESSDKLVGEFLGTGPIVRNKMIKNWGVIGGIAAAIAAGVYVLWGPITERKKKKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIKWLEKFSGSPLIQSCKDNQLSMTLLQLLKAL
SSEEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVTHLF
DMQSLESLPDQDEKTMTCRSRAPLHPIPSPWKFHHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQGTTMKGQVLESQRTT
FIKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEYLSMDRYKHNASAQRSQRVR
CAPKPIKADNSDDSVEKPTANGTDVEHRNNNNNPFSNGTCSSVFLHSPGVNPQLGLTYDY
SSAEYLFQLTAVLVHHGDMHSGHFVTYRRSPSPFSSWLWVSDDSVRKASLHEVLSSNAYM
LFYERVRRLNLAVRSSEE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagaaagctctgataagcttgttggggagttccttggcaccgga
cccatagtcagaaacaagatgataaagaactggggtgtcatcggtgggatagctgctgcg
attgcggctggagtatacgttttgtggggcccaattacagagcgaaagaagaaaaagaga
ggtatggttcctggtctgttgaacttaggcaacacatgcttcctgaactctttgcttcag
ggcttggcagcatgtccgtccttcatcaagtggctggagaagttttcaggttcgccttta
atccagtcatgcaaagataaccagctgtccatgacactgcttcagcttctcaaagctctg
tccagtgaggagcctggagaggaagatgtacttgatgccggatgcctcctggatgttctc
agactgtaccggtggcacatcagttcatttgaagagcaggatgcacatgaactttttcat
gtccttacgtcttctctggaggaggagcgggatcgtcaacccaaagtcactcacttgttt
gacatgcagtcacttgagagtctccctgatcaagatgagaaaactatgacctgcagaagt
cgagcaccacttcatccgataccaagtccttggaagtttcaccatccttttcacggtcgt
ttaacaagcaacatgtcatgcaagcgctgcgaacaacaaagtccggtacggtatgactca
tttgagagcctctccctgtccatccctttacctcagtggggtcgacctatctctttagat
cagtgtcttcagcatttcatctcctcagaaaccatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaagggaccacaatgaaggggcaagttctggaaagccagaggacaaca
tttattaaacagctaaaactgggaaagctcccccagtgcctctgtatccatttacaaaga
ctgacgtggtccagtgaaggaacacccatcaaaagacaggagcatgtgcagttcacagag
tacctatcgatggaccgctacaaacacaatgcttccgcacagagaagtcagcgggtcaga
tgtgctccaaagcccataaaggcagataattcagatgattcagtggagaagcccactgcg
aatggcactgatgtggagcaccgtaacaacaacaacaaccctttttccaatggaacgtgt
tcgtctgtatttcttcactcacctggtgtgaaccctcagctcggcctcacatatgactac
agttctgcagagtaccttttccagctcacggctgttctggttcaccacggtgacatgcac
tcaggacatttcgtcacataccgtcgcagcccttcacccttcagttcctggctttgggtg
tcagacgactcggtacgaaaagccagcctgcacgaggtgctgtcttccaacgcttacatg
ctcttctacgagagagtccgaagactgaatctcgctgtgcgctcttcagaggagtaa
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