Micropterus salmoides (largemouth bass): 119891183
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Entry
119891183 CDS
T07309
Symbol
smarca2
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119891183 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119891183 (smarca2)
03036 Chromosome and associated proteins [BR:
msam03036
]
119891183 (smarca2)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119891183 (smarca2)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119891183 (smarca2)
Chromatin remodeling factors
BAF complex
119891183 (smarca2)
PBAF complex
119891183 (smarca2)
GBAF(ncBAF) complex
119891183 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
119891183
NCBI-ProteinID:
XP_038558469
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGASPGPGTPNAPHGM
QGQGQSDYSQDSMYPMHKTMEGMNDKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGGGPTPPHMPPSQSGPMMPMEPQGAMPNMGQQGR
APSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQPLQQQQ
APSASPYNRPAGMPMAPMGGPQSSPCPTPAMQAHNQSTGPKPWSDGQSGENQANPQKHLT
PVSSGRPSPAPPQPSAVPAGPMPGSSVAPQAPGQQVSPMLQMQQKQNRVTPIQKPQGLDP
VGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVAC
MRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHA
KDFKEYHRSVSGKMQKLTRAVATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLID
QKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKKKKKKVDRDDEGTSAIGPD
GEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGS
EFEEEEEEEAAKAETEEKMIDPNGVEVFVTAAKHIIESAKQDVDDEYSVPTGQTSSQSYY
GVAHAVIERVEKQSSLLINGTLKHYQTQGLEWMVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEHKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQLRSGK
FNVLLTTYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAK
TLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIINGHDLYRASGKFELLDRILPXLH
ATNHRVLLFCQMTSLMTIMEDYFSYRNFQYLRLDGTTKSEDRALLLKKFNEEGSQYFIFL
LSTRAGGLGLNLQAADTVXIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEK
ILAAAKYKLNVDQKVIQAGMFDQKSSSHERRVFLQAILEHEEQNEEEDEVPDDETLNQMI
ARNEDEFELFMRMDMDRRREHARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEEKL
FGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRDDGG
TKAKKKRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKELPEY
YELIRKPVDFKKIKDRVRNHKYRNVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVF
KSARQKIAKDEESEDDSDEDDEEESEAEAKSVRVKIKLSKEARSHDKGKKRQSRGKAKPV
VSDDDSDEDLDDNDQSDKSKSDDD
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccatcggacacatcaggtggtatgtcccatcctggcccttccccgggggca
ggtctatccccaggacccattttgggccccagtcctggaccggacccctcaccaggctct
gttcacagtatgatgggagccagtcctggacctggaacaccaaacgcacctcacggcatg
cagggccagggacaaagtgattactctcaggatagcatgtatcctatgcacaagaccatg
gagggaatgaatgacaagactatggcagatgcgatgcactttggtcacatgaaaggtgtg
ggaatgagatctctgcatagtggcatggggcctccacaaagtcctatggaccagcacagc
caaggatacatgtccccccacccatctcccatgggtgtccatgagcacgcttccagtccc
atgtcaggaggtggaggtggtgggggacccacaccgccccacatgcctccctcccaatca
ggccctatgatgccgatggaaccccagggagccatgcccaacatgggccagcagggccgg
gccccttctgctttcagtccagtccagctgcagcagctcagggctcagatcctggcctat
aagatcctgggccgtgggcagcctctgcctgaaaaccttcaactggctgttcagggcaag
aggagcttacccacaatgcagcagcagcagcagcaacaacaaccgctgcagcagcagcag
gcgcctagtgctagtccttacaacaggcctgcaggtatgccaatggcacctatgggtggt
ccccagtcaagtccctgccctacaccagccatgcaagcacacaatcaaagcaccggaccc
aagccatggtccgatggtcagagtggtgaaaatcaagccaaccctcagaagcacctcacc
cctgtttcaagtggacgcccgtcccctgcaccacctcagccctcggctgtgccagctggg
cccatgccaggcagttcagtggcccctcaagctcccgggcagcaggtgtcccccatgctc
cagatgcagcagaaacagaaccgcgtcacgccaatccagaagccacagggcttggaccct
gtggggatcctgcaagagagagagtacagattgcaagctcggattgcacatcgaatccag
gaactggaaagtttgccaggctcgttgccccctgacctgaggactaaagccacagtggag
ctcaaggcactgcgtctactcaacttccagcggcagcttagacaggacgtggtggcgtgt
atgaggcgagacacgacgctggagacggctctcaactcgaaggcttacagacgcagcaag
cggcaaacgctgcgggaggcacgcatgaccgagaagctggaaaaacagcagaagctcgag
caggagaagaagcgcagacagaaacatcaggaatatctcaacagtatccttcagcatgct
aaagacttcaaagagtatcaccgctcagtgtccggtaaaatgcagaaactcaccagagct
gtcgccacctggcacaccaacacagagcgggaacagaagaaggagactgagagaatcgag
aaggagaggatgaggagacttatggcggaagatgaggaaggataccgaaaactaattgac
caaaagaaagacaagcgtctggcctacttgctgcagcagacggatgaatacgtggccaac
ctcaccaccctggtgtacgaacacaaagcggcccaagctgcaaaggagaagaagaggagg
aagaaaaaaaagaagaaggtggatagagatgacgaaggcacaagcgccattggaccagat
ggagagccaatggatgagagcagccaaatgagtgagctgccagtcaaagtgattcagact
gagactgggaaagttttgcagggaacggatgctcccaaatccagccagctggaggcttgg
cttgagatgaaccctgggtatgaagtggccccgcggtcagacagcgaggagagcggctca
gagtttgaggaggaggaggaagaggaagcggccaaggcagaaaccgaggagaagatgatc
gatcccaatggagttgaagtgtttgtgacggcggccaagcacatcatcgagtcagccaag
caggatgtggatgatgagtacagtgttcctactggacaaaccagctcccagtcttattat
ggtgtggcccatgctgtcattgagagggtggagaagcagtcgtcgctgctgataaacggc
acactcaaacattaccagacccagggcctggagtggatggtgtccctgtacaacaacaat
ctaaatggcatcctggctgatgaaatgggcctcggcaaaaccatccaaaccatcgcactt
atcacctatctaatggagcacaagaggatcaacggcccctttctcatcattgttcctctc
tcgactttgtctaactgggtttatgaacttgacaagtgggcaccctctgtggtcaaaatt
gcttacaagggtacccctgctttgcgccgtgggcttgtgcctcaactccgcagtgggaag
ttcaatgtcttgctgactacctatgaatacatcatcaaggataagcaaattctggccaag
attcgttggaagtacatgattgtggatgagggtcaccgtatgaagaaccaccactgtaag
ctgacccaggtgttgaacacccactatgtggctccccgccgactcctcctcaccggtaca
ccactgcagaacaagctgcccgagctgtgggccctgctcaacttcctcctgcccaccatc
ttcaagagctgcagcaccttcgagcagtggttcaacgccccgttcgccatgacaggagag
agggttgacctaaatgaggaggagaccatcttgattattcggcgtttgcataaggtgctc
cgccccttcctgctccgcagactgaagaaagaggtggagtcacagctgccagagaaggtg
gagtatgtcataaaatgtgacatgtctgctatacagaaggttttgtaccgccacatgcag
aaaggcatccttctcactgacggctcagagaaagacaagaagggcaaaggaggagcaaag
accctgatgaacaccatcatgcagctgaagaagatctgcaaccatccatacatgttccag
cacattgaggaatcgtttgctgagcacttgggttatccaaacggcatcataaatgggcat
gatctgtatcgagcttctgggaagtttgagctcctagatcgcatcctgccanagctacat
gccactaaccacagagtcctgttattctgccaaatgacctcactgatgacgatcatggag
gactatttcagctaccgcaactttcagtatctgcgtcttgatggaaccaccaagtctgag
gaccgagctttactgctgaagaaatttaatgaggaaggatctcagtacttcatcttcctg
ctcagcaccagagcgggtggcctcggccttaacctgcaggctgccgatactgtgntcatc
tttgacagtgactggaacccacaccaggaccttcaggctcaggaccgggctcaccgcatc
ggtcagcagaatgaggtgcgtgtgcttcgtctctgtaccgtcaacagtgtggaggagaaa
atcttggcagctgccaaatacaaactcaacgtggatcagaaggtcatccaggcaggcatg
ttcgaccagaagtcctcgagccacgagcgtcgtgtcttcctccaggccattttagagcat
gaggagcagaatgaggaagaagatgaggtgcccgatgacgaaacccttaaccagatgata
gcccgcaatgaagatgaatttgagctcttcatgcgcatggacatggaccgacgccgggag
cacgccaggaacccaaagcgtaagcctcgtctaatggaagaggacgagttgccatcttgg
atcatcaaagacgacgcggaggtggaacggctcacatatgaagaggaggaggagaagctg
ttcggccgaggatcacgctgtcgtcgggacgtggactacagtgacacgctgaccgaaaaa
cagtggctacgggctattgaggatgggaacctggaagagatggaggaggagatccggctg
aaaaagcgcaaacgcaagagacgtcaggacaaggactcatcgagcagagatgacggcggc
accaaggccaagaagaaacgtggacgtccaccagctgagaaactctcccccaaccccccc
aaactcaccaagcaaatgaacaccatcatcgatacggtcatcaactacagagatgggtca
ggaagacaactaagcgaggtctttgtccagttaccatccaggaaggagctcccagagtat
tacgagctaatcagaaaacccgtggacttcaaaaagatcaaggatcgtgtgagaaaccat
aaatacaggaatgtgggcgacctggagaaggatgtgatgctgctttgtcacaacgcccag
accttcaacctggagggatcccagatatacgaggactccattgtccttcagtctgtgttc
aagagtgccaggcagaagattgccaaggacgaagagagtgaagatgacagcgatgaggat
gacgaggaagagtcagaggcagaggccaagtcggtgcgggttaagatcaagttgagtaag
gaggcgcgcagccatgacaaaggcaagaagagacaaagccgagggaaggccaagccggtg
gtgagcgacgacgacagcgacgaagatctcgatgacaatgatcagtcagacaagagcaag
agtgacgacgactga
DBGET
integrated database retrieval system
