Micropterus salmoides (largemouth bass): 119891253
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Entry
119891253 CDS
T07309
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119891253 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119891253 (nipbla)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
119891253 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
HEAT
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
119891253
NCBI-ProteinID:
XP_038558622
LinkDB
All DBs
Position
Unknown
AA seq
2542 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVPP
YKITQNSMHSPAQSANFQPAAISPNPSSRFVSPQTGSSSRYMGQQNSPVPSPYTPQSPAT
GYIQQYPHQQPPSYNQHQQIQQVSVASPMVPGGIRNIHEGKVSGQMANAANHHSDRHGTE
DYLNIVHRLSSEEGDSTMRNPSFPLRSPQSGCSPAGSEGTPKSGSRPPLILQSPPPYAPS
PREGGPDQKQQLQQRKKPPAVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNESDTPGEVV
PGIDQNSDNMEAELGFQQVPVLQQNLGVRMQQQASQQAGGASGLQPPSSPYDEAELDALA
EIERIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAG
KLTPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGPA
ALEGSDTALRLKPDGRPEVIKNRVDKHDSRRESRESSKHRHDEKSSDRRGDMPKSSNRGE
HGRDRDRESDRDRRHRSETGGRDRRSPDSRCRSDRDRSGFRASSTGEPGRSSNRQDGSKQ
ASSASGAKLPDSFPAHLLGGHSGALKNFQIPKIKRDKDGSGSTESQVWGQPKVKLERLGL
VQDFEKRPKPVVLLKKLSVDQIQRIIRHSKSGKNRISSGKSGKSGMDPAVLKELPPELLA
EIESTMPLCERVKMNKRKRSTVNEKPKYAEVSSDDDFDANGESARKRQRRDKDRSWDFEE
RERRGSGEHRKSGHRDSRRGSGSRYRDSSEEDSPPPSMSEVARKMKMKEKQKKRKAYEPK
LTQEELMDSSTFKRFLASIDNILENLEDVDFTTMADDDEIPQELLLGKHQLNELGSESAK
IKAMGISSRIPSDKLVKLLNILEKNIQDGSKLSTLMNHDHDAEDEEKLWRDLIMERVTKS
ADACLTALNIMTSSHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLS
SKAKRAKCSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENV
SELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKDGEPMYI
QMVTALVLQLIQCVVHLPNDKDIFEECDKVDQDVLITNSYETAMRTAQNFLSVFLKKCGS
KQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLD
YLGTVAARLRKDAVTSKMDQRSIDRILQESQGSDETQQLQKALLDYLEENAETDASLVFA
RKFYIAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKEIETTGEIMQRAEKRKKFLRNI
IKTMPAHFATLKMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRT
KAMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYY
DMLIERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVRMIRRVNDEEGIKKLVNETF
QKLWFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKA
CVQLVDNLVEHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLT
TKCNTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCL
GAVVNKVTHNYKFVWACFNRFYGALNKLKIQHHEDPNSTTLVANKPFLLRSLFTVGALAR
HFDFDLEEFKGTNKVVIKEKVLELLIYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFMPEV
KSLYNGILADSSSSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISS
GMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEP
SMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYNLQQAIESSRKTIIRGFRQDETHSALC
SHLFTMIRGNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPYQSQEEPLFIMHH
IDITLSVSGSNLLQTFKELLLKEPRRKEKVKKEWKNMSDGEDEEQKMNCDSLRSDEEDDS
NSDDDVVRRPKKARKPVADSSESETDLEDLDLEDVDKVMRLLPDSPTGLLDFANAVQGIL
LLLVLKQHLKNQYGFSDSKIQKYSPTESAKVYDKAVNRKNNVHFHPRQTIDFISNNMAHA
TLTNDVKRRIVRQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGPLSGPS
PRNQAGPETDDDDSDGDERTPGSSRRSRRAGDSSDPGRMSETVESMDVIALCCPKYKDRP
QIARVIQKTSNGYSIHWMAGSYSGPWAEAKKRDGRKQVPWVDTIKESDIIYKKIALTSNH
KLSNKVVQTLRSLYAAREGGAS
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctgcccctcccttcccctctcccggccaccaccactaagagcctc
ctatacaatgggaggatcgcagaggaagttacctgcctactgggctgtcgggatgaaaat
ctggcctcccagctagcccatggtctaaaccaggtctccacagagcacatagagctgaag
gacaacctgggtagcgatgagccagagggagatgcaccactgctcctgcagaccatgttg
gccaggaaccctggcatcttcagggagaaaaatgttatgcagcagccaatggtaccgccg
tacaagattacccaaaattccatgcacagccctgcccagtctgcaaacttccagccggct
gcaatttctcccaatccatcaagccggtttgtgtcgccccagactggttccagtagtcga
tatatgggccagcagaacagtccagtacccagcccctacactccgcagagccctgccact
ggttacatacagcagtatccccaccaacaaccacccagctataaccaacaccaacagata
cagcaagtgtctgtggccagtcccatggtcccaggcggcatccgaaatatccatgagggc
aaagtatcggggcagatggccaatgctgccaaccaccactcagaccgacatggcacggag
gactacctgaacattgtacaccgactcagcagtgaggagggtgattccaccatgaggaat
ccttcttttcctctgaggtctccacaatctggctgctctccagcagggagtgaaggaaca
cccaaatcgggttcccgtcccccactgattctgcagtcaccacctccatatgcgccctca
ccaagagaagggggacctgaccagaaacagcagctccagcaaaggaagaaacccccagcg
gttaaagaggagaaagatatgtacgacattgtaagctctccgaacaaggactctacaaaa
ctcaccctcaagctgtccagggttaagtcaaatgagtccgacaccccaggtgaggttgtg
ccgggcattgaccagaactctgacaatatggaggcagaactgggctttcagcaggtgcct
gttctccagcaaaatctaggagtccgtatgcagcagcaggcctcccagcaagcaggtggt
gccagtggtctccagcctcccagttccccttacgatgaggcagagctcgatgccctcgct
gaaattgaaaggatagaacgagaggcagctagtgagaaatgctccaaggaggtgcaagat
aaagacaagcctctgaagaagagaaaacaggactcatttcccctggagccaggtgcaggg
ggaccaggtggccccacaggtgccccaggcagtggatcaacaggagggggcaatgctggc
aaactgacaccgcaagaggccaccgcagctgggaatggtgccagccgccctcccctcatg
gtgagcatcgacctccagcaggcaggccgcgctgatggccagctcgacccttgtctggct
gcccctattccagcccttgaggcccaacgctggcctgaagaaccagctagtgggccagct
gcattggaaggttctgacacggcattgcggttgaaaccagacggtcgacctgaagtcatc
aagaacagggttgataaacatgacagcaggagagaaagtcgggagtcgtcgaagcaccga
catgatgagaagtcctcggacagacggggagacatgccaaagtcatcaaaccgaggggaa
cacggacgagacagggaccgtgaatctgacagagataggcggcatcggagcgagactggt
ggtcgagacagacgctcccctgactctcgatgccgaagtgaccgagataggtctggcttc
cgggcttcttccactggagagcctggtcggagcagcaataggcaagatggttccaaacag
gcctcatctgcttctggtgctaaacttccagattctttccctgctcatctcctgggaggc
catagtggcgcactgaagaacttccagatccctaagatcaaacgtgacaaggatggcagt
gggtccactgaaagtcaagtgtggggccagcccaaggttaaactggagaggctgggtttg
gtgcaggactttgagaagaggccaaagcctgtagtgctcttgaaaaagctctctgtcgac
cagatccagaggatcatccggcacagcaagtctggaaagaacaggatatcgtcaggaaag
tctggcaaaagtggaatggacccggcagtcctgaaggagctgcccccagagctgctggca
gagattgagtcaaccatgcccctttgcgaaagggtaaagatgaacaagaggaaacgaagc
actgtaaatgagaagcccaaatatgctgaggtcagctcggatgacgactttgatgcaaat
ggagagtctgcaaggaagcggcagcgccgggacaaagacaggtcctgggactttgaagaa
agggagcgtcgtggttcaggggagcatcggaaaagcgggcatcgggacagccgacgaggc
tcaggcagccgctacagagactcctccgaggaagattcacccccaccgagtatgagtgaa
gttgcaagaaaaatgaaaatgaaggaaaagcagaagaaacggaaagcatatgagcctaag
ctgacccaagaggagttgatggactcgtctacattcaagaggttcctggcaagcattgac
aatatcctggagaatctggaggatgtggattttactaccatggcagatgatgatgaaata
cctcaggaattgctgcttggtaaacaccagttgaatgagctgggcagcgagtctgccaag
attaaggccatggggatctccagcaggatcccatcagataagctggtgaagctgctgaac
atactggaaaagaacatccaggatgggtccaagctctccaccctgatgaaccatgaccac
gatgctgaagatgaggagaaactgtggagagacctgataatggagagagtcacaaagtca
gctgatgcctgtctcacagctcttaacatcatgacctcatcgcacatgccaaaggccgtc
tacatagaagacgtcatagagcgggtgctacaatacaccaagttccatcttcagaacaca
ctgtatccacagtacgacccggtctacagggtggacccacatggaggtggcctgttgagc
tccaaggcaaaacgtgcgaaatgttccacacacaagcagcgagttattatcatgttgtac
aacaaagtgtgcgacatcgtcagcaacatctctgagctcctagagatccaactactcaca
gacaccaccatcctccaggtttcttcaatgggaatcacgccgttctttgtggagaatgtc
agtgagctgcagctgtgtgccattaaactagttacagcagtgttctcacgctatgagaag
catcggcagctgatcctggaggagatctttacctctttggccagactgcccaccagcaaa
cgctccctcaggaatttcaggctgaacagctcagacaaggacggagagccgatgtacatc
caaatggtgacggctctggtgctgcagctgatccagtgtgtggtccatctccccaacgac
aaggacattttcgaagagtgcgacaaggtggatcaagatgtgttgataaccaactcgtat
gaaacggcgatgagaacggcacaaaacttcctctcagtcttcctcaaaaagtgtggcagt
aaacagggagaagaagattaccggccattgtttgagaactttgtccaggacctgctctcg
acagtaaacaaaccagagtggcctgctgcagagctgctgctcagtctgcttggcagacta
ctggtacaccagttcagtaataagcagacagagatggccctgagagttgcatctctagac
tacctgggcactgtggctgcccgtctgaggaaggacgctgtcaccagcaagatggaccag
agatcaattgatcgaatcctacaagagtctcaaggaagtgacgagacccagcagctgcag
aaggctctactggactacttggaagaaaatgctgagacagatgcatcactggtgtttgct
agaaagttctacattgcccagtggttccgggacgccactacggaggctgagaagtccatg
cggaaccagaatccaaaggatgaggactcatcggacggaccccaacatgccaaggagatt
gagaccacgggggaaattatgcagcgtgctgagaagcgcaagaagttcctgcgcaacatc
atcaagaccatgccggctcatttcgccacactgaaaatgaactctgacactgtggactat
gacgactcttgtctgatcgtgcgttatttggcctccatgaggccgttcgcccagagcttt
gatatttatttaacgcagatcttgagagtgcttggggaaagtgccattgctgtaaggacc
aaagccatgaaatgtctatctgaggttgtggctgtggaccccagcatactggcacggtct
gacatgcagcgtggcgtccatggtcgtttgatggacaactccaccagtgtgagagaggca
gccgtggagctgcttggcaaatttgttctcagcagaccccaactcactgagcagtactac
gacatgctcatagaaaggatactggacactggtatcagcgtgagaaaacgggtgatcaag
atcctgagagacatctgtctggagcagccgaccttcagtaagattactgagatgtgtgtg
aggatgatccgcagggtcaatgatgaagaggggatcaagaaactagtgaatgagacattc
cagaagttgtggtttacaccgaccccagcccatgacaaagagaccatgactagaaagatc
ctcaacatcactgatgtggttgcagcgtgtcgagacaccggctatgactggtttgagcag
cttcttcagaatcttctcaagtctgaagaggatgcatcgtataagccggccaaaaaggcc
tgtgttcagctagttgacaatctggtagagcacatcctcaaatacgaggagtctctcgca
gagaacaagggtgtgaactcaacacggctagtggcgtgtatcaccaccttgtacttgttc
agcaagatcagggcccagctcatggtcaaacatgccatgaccatgcaaccctacctaacc
acaaagtgtaatactgccaatgacttcatggtcatctgtaatgtggcaaagatcttggag
cttgtagtaccactgatggagcaccccagtgagaccttccttgccaccatcgaagaagac
cttatgaagctcatcatcaaatacggcatgacggtggtccagcactgtgtgagctgtctt
ggggctgttgtcaacaaagtcacgcacaactacaagtttgtctgggcttgtttcaacaga
ttctatggtgcacttaacaagctgaagatacagcatcatgaggatcctaacagcacgacg
ttggtcgcaaacaagcctttcctgctgcgatcgctcttcacagtgggtgccctggcccga
cactttgattttgatctggaggagttcaagggcaccaacaaggttgttatcaaggagaaa
gttctcgagctgctgatatacttcaccaaacatgaggatgaagaggtcaagaccaaagcc
atcatcggcttaggcttccttgtgatcatgcatcctagccagatgtttatgccggaggtg
aagtccttgtacaatggcatcctggctgacagctcctcctccatcaacctcaaaatccag
atccttaaaaacctccagacgtaccttcaggaggaggacacgcggatgcaggaagcagac
agagaatggaagaaactgtccaaacaggaggatctgaaggagatgggagacatctcttca
gggatgagcagctccattatgcagctttatctaaagcaggtgttggaggcgttcttccac
acccagtccagcgtacggcactttgctctcaacgtcatagctctcacactcaaccagggt
ctcatccatcctgtacagtgtgtaccctacctcattgcaatgggaacggacccagagccc
agcatgaggaacaaagctgaccagcagctggtggagattgacaagaagtacacaggattc
atccacatgaaggcagttgctgggatgaagatgtcgtacaatttgcagcaggccatcgaa
tcgtctcgtaagaccatcataagaggtttcaggcaggacgagacgcactcagcactctgc
tcccacctcttcactatgatccgggggaaccggcaacatcggagggctttcctcatctcg
ctgctgaacctctttgatgacagtgctaagacggaagtaaacatgctgctgtttatagca
gataacctggcctgtttcccctaccagagccaggaggagcctctcttcatcatgcaccac
atagacatcaccctgtctgtttctggcagcaacttgttgcaaaccttcaaagagcttctg
ctaaaagagcctaggcgtaaggagaaggtaaagaaggagtggaagaacatgtcagatggg
gaagatgaagagcaaaagatgaactgcgattctctgaggagtgatgaggaagatgacagc
aacagtgatgacgatgtggtacggcggcctaaaaaagccagaaaacctgttgcagacagc
tcagagtcagagaccgatctggaggatctggatttggaggatgtagacaaagtaatgagg
ctcctcccagacagtcccacaggtctcttggacttcgctaatgctgttcagggcatcctg
ttgctactggtgctcaaacagcatctgaagaaccaatatggattctctgacagtaaaatt
cagaagtactctccaacagagtcagccaaggtgtacgataaggcagtgaacagaaaaaac
aacgttcacttccacccacgacaaaccatcgacttcatctccaacaacatggctcacgcc
acactgacaaacgatgtcaagaggcggatagtcagacagtacctagatttcaaggttctg
atggaacatctggacccagacgaggaggatgaggagggagaagcatctgccagcgctaac
atcagaaacaaagccataaacgccctactgggaggctccggccccttgtcaggacccagt
ccgcgcaatcaggcaggaccagagacggatgacgatgatagtgatggcgacgaaaggacc
ccagggtcctctcgaaggtcaaggcgagcaggtgactcctcggaccctggccgtatgagt
gagacagtggagtctatggatgtgatcgccctctgctgccccaaatacaaggaccggccg
cagatagcccgagtcatccagaagacctccaatggatacagcatccactggatggctggc
tcctactcggggccctgggcagaggccaagaaacgtgatggccgcaaacaggtgccttgg
gtggacactattaaggagtcggacatcatttacaagaagattgccttgaccagcaaccac
aaactgagcaacaaagtagtacagactttacgctcactatatgcagcgcgggaaggaggg
gctagctaa
DBGET
integrated database retrieval system
