Micropterus salmoides (largemouth bass): 119891307
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Entry
119891307 CDS
T07309
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119891307
04121 Ubiquitin system [BR:
msam04121
]
119891307
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
119891307
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119891307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
119891307
NCBI-ProteinID:
XP_038558743
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MKRTGRRRSSVWDCFEQVGNFVRCMKCDATLKYCGGATSSMMNHMSRHHPSTTPPDEDEK
PVICTVQCIEEESTGHSDIMQVAIMSPNMSLTNNPTEREYGERKRLKRSSVWDIFIKVDD
EVHCTMCDTKLKYRSSTTSMMYHIKNKHPDTMPSDGVSLATHAEVTELISRMIEKDMLPI
SVVSGEGFRELLAYTVHNYKMPSAGDITRLIEGHFHEKMEELVMQLGRVEKVALTADFWT
ALPFQRYITVSCSFITEDWQGKSAVLRTHKLSSDSHTTDTITERLLNTVQTWGIAGKVTA
CVHNNTQDVLSANACARVTWDYATCFATTLQLAVSDGLSEDLVRIIVAAGRLVKHFSHSL
LASEALEQKQVQMCLPQHKLIQSSKARWDTICDMFERLLEQRWAIKAVLSDRTITHRQEA
QTLEIEDDCWQIIENFTPVLATLKWATTVISAETEVSISNIYPITFSLIQTHLVPKENDV
EQVSEFKLKVQKSLRNHMEVDSNDLASKPALIASMLDPRHKHLSFLTPTGRLAAKVKLHE
LVSKLDVITTTVGPKDEQQETLITPDISQVAMPSQMRSDTKNTMVLLLGDNYSSSYATDS
EAQVDYYLRDIAPSLDINPLDWWRVNGPRFPKLATLARHYLCVPGVSLPSLLSEAGQTFA
TMRTRLSPEHVDMMIFVNRNA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtacggggagaagacggagttctgtgtgggactgcttcgaacaagtggggaac
ttcgtccgctgcatgaaatgcgacgctactctgaagtactgcggcggagccacgagctcc
atgatgaatcacatgagcaggcaccatccgtccacgacgccgccagatgaagacgagaag
ccggtgatttgtacagttcagtgcatcgaggaggagagtaccggtcattcggacatcatg
caagttgccatcatgtcacccaacatgagcttgacaaacaaccccactgagcgcgaatac
ggggagaggaagcgcctgaagcggagctctgtgtgggacattttcatcaaagtggacgac
gaagttcactgcacgatgtgcgacacaaagctgaaatacaggagcagcaccaccagcatg
atgtaccacatcaaaaacaaacacccggacactatgcctagtgatggtgtgtcactggca
acacacgcagaggtgactgaactcatctccagaatgatagagaaggacatgcttcccatc
agcgtggttagcggtgagggttttcgtgagctgcttgcatacactgtgcataattataaa
atgccatctgctggtgatataacacgccttattgaaggccattttcatgagaagatggag
gagcttgtgatgcagctgggtagagtggagaaagtggccctcactgctgacttctggaca
gccctcccatttcagaggtacattacagtttcctgctccttcataacagaggattggcaa
gggaagtcagctgtgctgcggacacacaagctatcatctgacagccacactacagacaca
atcacagagaggcttctgaacactgtgcagacctggggaattgctgggaaagtgactgcg
tgtgttcataataacacacaggacgtcttgtcggccaatgcgtgcgcccgtgtcacctgg
gactatgccacttgcttcgccactacattgcagctcgcagtcagtgatgggctgagtgag
gatcttgtccgcatcattgttgcggcagggaggctagtcaaacacttcagtcacagcttg
ctggcaagcgaagccttggagcagaagcaagttcagatgtgcctgccacagcacaagtta
atccagtcgagcaaagccaggtgggacacgatctgtgatatgtttgaacggttgcttgag
cagcggtgggcgattaaagctgtgctctctgatcgcacaatcacccacagacaggaagcc
cagacccttgagatcgaagacgattgctggcaaataattgagaatttcacaccggtgctg
gccacactgaaatgggcgacaacagtcatatccgctgaaacagaggtatccatttcgaac
atctacccgatcacgttcagcctcattcagacccaccttgtgccaaaagagaacgatgtt
gaacaggtctcggagttcaagctgaaagttcagaagtcacttagaaatcacatggaggtt
gactctaatgacctagcctccaaaccagctctgattgcctcgatgctggaccctcgtcac
aaacatctcagcttcctgacaccaacggggagactggctgcaaaggttaaactgcatgaa
ctcgtttcaaaattagatgtgataacgaccactgtgggcccaaaggatgaacagcaggag
accctgatcacgcctgacattagccaggtggctatgccctcacaaatgagaagtgacacc
aaaaacaccatggtgttgctcctaggagacaactacagttcctcctatgccacggactct
gaggctcaggtggattactacttgagagacattgctccctcactggacataaaccctctt
gactggtggagggtaaatggaccaagattccccaaactggcaactctggcgaggcattat
ttgtgtgtacctggggtatcgctgccatctctattgtcagaggccggacaaacatttgca
acaatgcgcacaagactgagcccagagcatgtggatatgatgatttttgtaaacagaaat
gcataa
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