KEGG   Micropterus salmoides (largemouth bass): 119891309
Entry
119891309         CDS       T07309                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119891309 (atxn2)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119891309 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 119891309
NCBI-ProteinID: XP_038558747
LinkDB
Position
Unknown
AA seq 1153 aa
MSMKAGGNRSKPGGGNTAGTAASGAGGSGGGRQNLGRGRHSGKGPAAVIFNGVYANMRMV
HVLTSVVGAKCELKVKNGAVYEGVFKTYGPECDLVLDAAHRKSPEPSIAPRKEDIVESII
FKASDVVVVTFKDVDLNFARKVSSDTDNFTDAAVSSRINGEHKEKDLEPWDGGETHNSDS
LESLDTDVAFCEILSLSSSQSNGWDPNDMFKYNEEKYGVLSTYDSSLSTYTVPLERDNSE
EFLKREARAALLAEEIEASATYKARVALENDERSEEEKYTAVVRGERETHTLSRENKYIP
PGQRNREAMSWGPGRQNSPRLAQSSAGPPTPRPGPHDYSPSSGADQRVVNGGSSHWPSPC
PSPTSRPPSRYQSGPSSLPPRAATPTRPPSRPPSRPSRPPSHSSHPSYPSSSSTSFSHHG
PTSPASTLPKRMSSEGPPRMSPKSQRTPRAHRVPPCRTTGVPPGVDLISHNAPGEVPVTP
PTRSSSSGGTWSSVVSGAHRPRSPRQNSMGGASPGPSSLPSPQTGTAPVETASTPTSASS
PTAASPAPNMVASPSGEAKECRVQETRQTSPTANKENIKPMDSSPSITRPVCKGPPSMAP
DHRKQIDNLKKFSVDFRLQSSSNSEPAFDQMMTKPPRDPADKPKDLPLDKASTVGREGNE
EGVVGIAAGTPGGAPAPSTTTANTSKPGSPAALSPSPSAPDQKRAGLDVTSQGVQTTSTF
SGPKHEEKEEKKEAVQDQVRKSTLNPNANEFKPRFNTQPKPANTPTPPRPQGQPSPSIVV
QQPPTVYGQTVCFPQMYPLTPVSPGVQKSIIWKSPAMYQVQMPHMTVSQSKPYRPGKVSN
MPQQRSDQHHPQGTPTMMHPATAAGPPIVAQSPAYSAQYFTCSPQQFTSQPLVQQMTHYQ
SQAQHVFSPVMQGNARMMAPPTHGQPSLVSSSTTQYPEQTHTMYGTTAYHMLSPGPMPQQ
YPHPNATLHPHPQHPQPSATPTGQAQQGGPPQHGGPPSHPAASPVQHPQHQQAAAAAAAA
QALHMANQAPQQQMFSALAPTPPSMTPGPNPQSPQASFPSAQQTVYIHPQQVQHGYNHNH
MAHVQQAHMQSSMVPSHHPAPTHPTMMLMATQGPGGPQPQMPQTALNPIPVSSTTHFSYL
AHPQVQTHHQQQL
NT seq 3462 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggtggaaatcgcagcaagcccggcggtggcaacaccgctggtacc
gccgcctccggtgccggaggaagcggcgggggaagacagaatctgggcaggggaagacac
agtggtaaaggtcccgcagcagtcattttcaatggtgtatatgcaaatatgaggatggtc
catgtcttgacttcagtggtgggggccaagtgtgagctgaaagtgaaaaacggagcagtc
tatgaaggagtatttaagacatacggtccagagtgtgacctggtgttggatgcagcccac
agaaagagcccagagccgagcatagcccccaggaaagaggatattgtggagagcatcatt
ttcaaggcctctgatgtcgtagtggtgaccttcaaagatgtggacctaaattttgccaga
aaagtctcctctgacacagacaacttcacagatgcagcagtgagcagtaggatcaatggc
gagcataaagagaaagatctagagccctgggatggaggagagacccacaactctgacagc
cttgagtctctggatacagatgtggccttttgtgaaattctctctctctcttcatctcag
tcaaacgggtgggaccccaatgacatgttcaaatacaatgaggagaagtatggagtcttg
tctacatatgacagcagcttgtccacatatacggtccccctggagcgggacaactcagaa
gagttcctcaagagggaagcgcgtgctgccctgctggcagaggagattgaggccagtgcc
acatacaaggcccgtgtcgccttggagaatgatgaacgctctgaggaggagaaatatact
gctgtggtgcgaggggaaagggagactcacacacttagcagagagaacaagtacattcct
ccaggtcagaggaacagggaggcgatgtcatggggaccgggacgtcagaattcccctcgt
cttgctcagagctcagctggaccccccactcctcgaccaggacctcacgactacagtccc
agctcaggggccgatcagagggtggttaatggaggttcatcccactggccctcaccctgt
ccatctcctacctcccgccccccctcccgttaccagtctggcccctcctccctgcctcct
cgggcggccacgcccaccaggccaccctccagacccccctctcgaccttccaggcctccc
tctcattcatcccacccctcctatccctcctcctcctcaacctccttttcccaccatggg
cccacatcgccagcctccactctgcccaaacgcatgtcttcagaaggtccacccaggatg
tctccaaaatcacagcggacgcctcgtgctcacagagtgccaccctgccggaccactgga
gtccctccaggagtggacttaatttcccataatgcacctggagaggtcccagtgactcca
ccaaccaggagcagctcctctggagggacatggtcctcagtggttagcggagctcacaga
cctcgttcccccagacagaatagtatgggtggagcctcccctggcccctcctccctcccg
tcaccacagacaggaacagctcctgtggaaactgcttctacaccaacatcagcttcctct
ccgactgctgctagccccgcccccaacatggtcgcctctccatcaggtgaagcaaaagag
tgtcgtgtccaagagacgagacaaacatcccccacggcaaacaaggagaacatcaaaccc
atggacagctcacctagtatcaccagaccagtctgtaaaggacccccttctatggcacca
gaccacagaaaacaaatagataatttaaagaaatttagtgtagattttaggttgcagtct
agttcaaactcagagcctgcctttgaccagatgatgaccaagcctcccagagatccagca
gacaagcctaaagaccttcccttggacaaagcctccacagtggggcgggagggcaacgaa
gagggcgttgtaggtattgctgctggcacccctggcggtgctcctgctccatccaccacc
actgcaaacaccagtaagcctggcagccccgctgcactgtccccgtctccttccgctccg
gaccagaagagggcggggctggatgtgacatcacagggagttcagacgacgtccacattt
agtggtcccaagcatgaagaaaaggaggagaaaaaggaggcagtgcaagatcaagtgaga
aaatcaaccctgaacccaaatgccaatgagttcaaacccaggttcaatacgcagcccaaa
ccagccaacaccccgacgcctccccggcctcagggccaacccagcccctccatcgtagtc
cagcagcccccgactgtgtatggccagacagtctgcttcccccagatgtatccccttaca
ccagtcagccctggagtgcagaaaagcataatatggaagtctccagctatgtatcaggtt
cagatgcctcatatgacggtcagccagtctaaaccctacagaccaggtaaagtatccaac
atgccccagcagaggtcagaccagcatcacccacagggcacgcccaccatgatgcaccca
gcgacggcagcaggaccgcctattgtagcacagagccctgcctactctgcccagtacttc
acctgcagcccgcagcagttcaccagtcagccgctggtccagcagatgacacattatcaa
tcacaggcacagcatgtgttcagtccggtaatgcagggcaacgccaggatgatggcgcct
cccacacacggccaacccagcctcgtctcttcctcaactacacagtacccagagcagaca
cacaccatgtatggtacgacagcctaccacatgttgtctccagggccaatgcctcagcag
tacccccatccaaatgccaccttgcaccctcacccacagcacccccagccctctgccacg
cctacaggccaagcccagcagggtggtcccccacaacatggaggtcctcctagccaccca
gctgccagcccggtccagcacccacagcaccagcaggcagcagcagcagcagcagcagcc
caggccctccacatggccaaccaggcaccgcagcagcagatgttctcagccttggccccc
acgcccccctccatgaccccggggcccaaccctcagtctccccaggcatcgttcccctct
gcccagcagactgtctatatccacccgcagcaggtgcagcacggctacaaccacaaccac
atggcacacgtgcagcaggcccatatgcagtccagtatggtgccgtctcaccacccggca
cccacccaccccacgatgatgctaatggctacccaaggtccaggtggtccgcagccacaa
atgccccagactgccctcaaccccatacccgtttcctccaccacacatttctcctaccta
gcacatccacaagtgcaaactcatcatcagcaacagctgtag

DBGET integrated database retrieval system