KEGG   Micropterus salmoides (largemouth bass): 119891435
Entry
119891435         CDS       T07309                                 
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03440  Homologous recombination
msam03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    119891435 (top3b)
   03460 Fanconi anemia pathway
    119891435 (top3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msam03032]
    119891435 (top3b)
   03400 DNA repair and recombination proteins [BR:msam03400]
    119891435 (top3b)
Enzymes [BR:msam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     119891435 (top3b)
DNA replication proteins [BR:msam03032]
 Eukaryotic type
  DNA Topoisomerases
   119891435 (top3b)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     119891435 (top3b)
   FA (Fanconi anemia) pathway
     119891435 (top3b)
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 119891435
NCBI-ProteinID: XP_038559013
LinkDB
Position
Unknown
AA seq 861 aa
MRTVLMVAEKPSLAQSIAKILSKGNCTSRKGLNGACSVHEYTGSFQGQTVRFKMTSVCGH
VMSLDFIELGPYFQGKYNNWDKVDPAELFSKAPTEKKEANPKLNMLKFLQVEARGCDYVV
LWLDCDKEGENICFEVLDAIQPVMNKSVREQSIYRAKFSSITDTDIWNAMNSLVEPNHNE
ALSVDARQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQS
FKPETYWVLQAKVFKGKESQLILDWNRVRVFDKEVGQMFMNLAKTSREAQVERVSKKEKT
KQRPQALNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFNLKETL
RQQTNNPIWAEEVKALLSTGLNRPRKGSDAGDHPPITPMRAASEGELGSDGWRLYEYITR
HFIATISEDCKYLQTTIEFSIGTEAFSCSGKTLISPGYTAVMPWQGIPLEEAMPVTEPGD
IFTVDDIKLVEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVENGRK
LKPTNLGIVLVHGYYKTDAELVLPTIRSAVEKQLNLIALGKANYLQVLQHTLDIFKRKFH
YFVDSIPSMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQ
NGAIKLYKELRCPLDDFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSC
QHSLNSLGIGQCVECDTGVLVLDPTSGPKWRMACNKCNVVVQFFEHAHRVQVVQESCDVC
DASLVAVDFNKTRTPLPAGETQHTGCVFCDPVFQDLVELKHATMRHRGGGARRGGRGRGR
GRRNNPKKPKDKMAALAAYFV
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgagaactgttttgatggtggcagagaagccctcgttggctcagtcgattgccaaaatc
ctctctaaaggaaattgtacaagtcgcaagggacttaacggagcatgctcagtgcatgaa
tacactggcagcttccagggccaaactgtacgctttaagatgacttctgtctgtggacat
gtgatgagtctagatttcatcgagcttggtccttattttcaagggaagtacaacaactgg
gacaaggtggaccctgcagaactctttagcaaagctcccacagaaaagaaggaggccaac
cccaaactcaacatgctcaaattcctccaggttgaagccagaggctgtgactatgtggtt
ttatggttggactgtgataaagaaggcgagaacatctgttttgaggtactggatgccatc
cagccagtgatgaacaagagtgtcagagaacagagcatttaccgtgccaaattcagctcc
attactgacactgacatctggaacgccatgaacagcctagtagagcccaaccacaatgaa
gccctgtcagtagatgcacgtcaggagctggatctgcgaattggctgtgccttcacacgg
tttcagaccaagtatttccagggtaaatacggcaatctagactcctccttgatctcattt
ggaccatgccagaccccaacactaggcttctgtgtggaacgccatgacaagatccagtct
tttaagccagagacttactgggtcctccaggcaaaggtgttcaaaggaaaggagagccaa
ctgatactggactggaacagggtgagggtcttcgacaaggaggtgggtcagatgttcatg
aacctggccaagacatccagggaggcccaggtggagagagtgagtaagaaagagaagacc
aagcagaggccccaggccttgaacacggtggaaatgctgagagtggcgagctctgccttg
ggcatgggtccccagcatacaatgcagattgcagagcgcctgtatacacagggctacatc
agctacccacgtactgagacgacccactacccagagaacttcaacctgaaggaaacactg
aggcagcagactaacaatcccatctgggcagaagaggtgaaggctcttctttcaactgga
ttaaaccgacccaggaaaggatctgatgctggagaccatccgcctatcactccaatgcgt
gctgcttcagaaggggaactgggaagtgatggctggcggctatacgagtacatcacacgg
catttcattgccaccatcagtgaagactgcaagtacctacagacgaccatagagttcagc
attggcacagaggccttctcatgtagtggcaaaactctgatatcaccaggttacacagca
gtaatgccgtggcagggcatccctctggaagaggccatgccagttactgagcctggagac
attttcacagtagatgacatcaagttggtggaaaagcagaccagcccccctgactacctg
actgaggccgaactcatcaccctcatggagaaacatggcattggtactgatgccagcatc
cctgtccacatcaataacatctgccagaggaattatgtgaccgtagagaatgggcgcaag
ttgaagccaaccaacctaggaattgtcctggtacatggttactacaagacagatgcagag
cttgtgctgcccaccatacgcagtgctgtggagaagcaactgaaccttatagcactgggt
aaggccaactacctgcaggtcctgcagcatacgctggatatcttcaagaggaagtttcac
tactttgtggattccatccccagcatggatgagttgatggaagtctccttttcacccatt
gctgctactgggaagcccctgtcccgctgtggcaagtgccaccgcttcatgaagtacatc
caggcgaagcccagcaggctccactgctcccactgtgacgagacgtacagtcttccccag
aatggagccatcaagctgtataaagagctccgctgtccactggatgactttgagcttgtg
ctgtggacctctgggtcccggggcaagagctaccccctatgcccatactgcttcagcaac
ccgcctttcagggatatgaagaaaggtatgggatgcaatgaatgtacccatccgtcttgt
cagcactctctcaactctttgggcatcggacagtgtgtggagtgtgatactggggttttg
gtgctggatccaacatctggacccaaatggaggatggcttgtaataaatgcaacgtggtg
gtgcagttctttgaacatgcacacagagtgcaggttgttcaagagagctgcgatgtctgt
gacgcctctctggtcgcggtggacttcaacaagactcgcactccacttcctgcaggcgag
acccaacataccggctgtgttttctgtgatccggttttccaggatctggtggagctcaaa
catgccaccatgaggcatcggggagggggtgcaagacgaggaggacggggacggggcagg
ggacgccgtaacaatcctaaaaaacctaaagacaaaatggctgccttggcagcttacttt
gtatag

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