Micropterus salmoides (largemouth bass): 119891435
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Entry
119891435 CDS
T07309
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
msam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119891435 (top3b)
03460 Fanconi anemia pathway
119891435 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msam03032
]
119891435 (top3b)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119891435 (top3b)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119891435 (top3b)
DNA replication proteins [BR:
msam03032
]
Eukaryotic type
DNA Topoisomerases
119891435 (top3b)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119891435 (top3b)
FA (Fanconi anemia) pathway
119891435 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
119891435
NCBI-ProteinID:
XP_038559013
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSKGNCTSRKGLNGACSVHEYTGSFQGQTVRFKMTSVCGH
VMSLDFIELGPYFQGKYNNWDKVDPAELFSKAPTEKKEANPKLNMLKFLQVEARGCDYVV
LWLDCDKEGENICFEVLDAIQPVMNKSVREQSIYRAKFSSITDTDIWNAMNSLVEPNHNE
ALSVDARQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQS
FKPETYWVLQAKVFKGKESQLILDWNRVRVFDKEVGQMFMNLAKTSREAQVERVSKKEKT
KQRPQALNTVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFNLKETL
RQQTNNPIWAEEVKALLSTGLNRPRKGSDAGDHPPITPMRAASEGELGSDGWRLYEYITR
HFIATISEDCKYLQTTIEFSIGTEAFSCSGKTLISPGYTAVMPWQGIPLEEAMPVTEPGD
IFTVDDIKLVEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVENGRK
LKPTNLGIVLVHGYYKTDAELVLPTIRSAVEKQLNLIALGKANYLQVLQHTLDIFKRKFH
YFVDSIPSMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQ
NGAIKLYKELRCPLDDFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSC
QHSLNSLGIGQCVECDTGVLVLDPTSGPKWRMACNKCNVVVQFFEHAHRVQVVQESCDVC
DASLVAVDFNKTRTPLPAGETQHTGCVFCDPVFQDLVELKHATMRHRGGGARRGGRGRGR
GRRNNPKKPKDKMAALAAYFV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgttttgatggtggcagagaagccctcgttggctcagtcgattgccaaaatc
ctctctaaaggaaattgtacaagtcgcaagggacttaacggagcatgctcagtgcatgaa
tacactggcagcttccagggccaaactgtacgctttaagatgacttctgtctgtggacat
gtgatgagtctagatttcatcgagcttggtccttattttcaagggaagtacaacaactgg
gacaaggtggaccctgcagaactctttagcaaagctcccacagaaaagaaggaggccaac
cccaaactcaacatgctcaaattcctccaggttgaagccagaggctgtgactatgtggtt
ttatggttggactgtgataaagaaggcgagaacatctgttttgaggtactggatgccatc
cagccagtgatgaacaagagtgtcagagaacagagcatttaccgtgccaaattcagctcc
attactgacactgacatctggaacgccatgaacagcctagtagagcccaaccacaatgaa
gccctgtcagtagatgcacgtcaggagctggatctgcgaattggctgtgccttcacacgg
tttcagaccaagtatttccagggtaaatacggcaatctagactcctccttgatctcattt
ggaccatgccagaccccaacactaggcttctgtgtggaacgccatgacaagatccagtct
tttaagccagagacttactgggtcctccaggcaaaggtgttcaaaggaaaggagagccaa
ctgatactggactggaacagggtgagggtcttcgacaaggaggtgggtcagatgttcatg
aacctggccaagacatccagggaggcccaggtggagagagtgagtaagaaagagaagacc
aagcagaggccccaggccttgaacacggtggaaatgctgagagtggcgagctctgccttg
ggcatgggtccccagcatacaatgcagattgcagagcgcctgtatacacagggctacatc
agctacccacgtactgagacgacccactacccagagaacttcaacctgaaggaaacactg
aggcagcagactaacaatcccatctgggcagaagaggtgaaggctcttctttcaactgga
ttaaaccgacccaggaaaggatctgatgctggagaccatccgcctatcactccaatgcgt
gctgcttcagaaggggaactgggaagtgatggctggcggctatacgagtacatcacacgg
catttcattgccaccatcagtgaagactgcaagtacctacagacgaccatagagttcagc
attggcacagaggccttctcatgtagtggcaaaactctgatatcaccaggttacacagca
gtaatgccgtggcagggcatccctctggaagaggccatgccagttactgagcctggagac
attttcacagtagatgacatcaagttggtggaaaagcagaccagcccccctgactacctg
actgaggccgaactcatcaccctcatggagaaacatggcattggtactgatgccagcatc
cctgtccacatcaataacatctgccagaggaattatgtgaccgtagagaatgggcgcaag
ttgaagccaaccaacctaggaattgtcctggtacatggttactacaagacagatgcagag
cttgtgctgcccaccatacgcagtgctgtggagaagcaactgaaccttatagcactgggt
aaggccaactacctgcaggtcctgcagcatacgctggatatcttcaagaggaagtttcac
tactttgtggattccatccccagcatggatgagttgatggaagtctccttttcacccatt
gctgctactgggaagcccctgtcccgctgtggcaagtgccaccgcttcatgaagtacatc
caggcgaagcccagcaggctccactgctcccactgtgacgagacgtacagtcttccccag
aatggagccatcaagctgtataaagagctccgctgtccactggatgactttgagcttgtg
ctgtggacctctgggtcccggggcaagagctaccccctatgcccatactgcttcagcaac
ccgcctttcagggatatgaagaaaggtatgggatgcaatgaatgtacccatccgtcttgt
cagcactctctcaactctttgggcatcggacagtgtgtggagtgtgatactggggttttg
gtgctggatccaacatctggacccaaatggaggatggcttgtaataaatgcaacgtggtg
gtgcagttctttgaacatgcacacagagtgcaggttgttcaagagagctgcgatgtctgt
gacgcctctctggtcgcggtggacttcaacaagactcgcactccacttcctgcaggcgag
acccaacataccggctgtgttttctgtgatccggttttccaggatctggtggagctcaaa
catgccaccatgaggcatcggggagggggtgcaagacgaggaggacggggacggggcagg
ggacgccgtaacaatcctaaaaaacctaaagacaaaatggctgccttggcagcttacttt
gtatag
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integrated database retrieval system