Micropterus salmoides (largemouth bass): 119891508
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Entry
119891508 CDS
T07309
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119891508 (snapc4)
03021 Transcription machinery [BR:
msam03021
]
119891508 (snapc4)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
119891508 (snapc4)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
119891508 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
119891508
NCBI-ProteinID:
XP_038559140
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MSVSLSAERDRIQRQVEELEQSLSATHTELELLSSETGDESDDEDEEEEEQSEQNSLLQC
ESAAGLLAQREKIQKEIQNLENVLGPHSPIYASDDDDDASSSDESELGLSLSVGSCLQMN
LVYQQVVQETLDQLETLLTHNQKQQKEVVSQLSGPVKESPRERCPPSSCQQPFNMFLGRF
LKPYFKDKLTGLGPPANQETKEKANRMAGCLDNNKLKLKRWESWQKTLLIHSVARDSLRK
LIQPKLSKVDYLTQKLSSAVETDRQQLREQIDSLEREIDLLRGKKEEELIGDRYEEHDWQ
KISNIDFEATRDADDIRCFWQNFLHPSINKTRWSQEEVQQLKEISMRHGERHWETIAAEL
GTGRTAFLCLQTYQRFVSASLRHSSWTPAEDALLRELVDKMRIGNFIPYTQISYFMEGRD
PAQVIYRWCQVLDPSLKKGPWTKQEDELLMRAVSLYGEGNWWRIRLEVPGRTDSACRDRY
LDTLKVETKKGPFDKQEREQLLQLVEKHGVGRWARIAAEIPHRNDAQCLREWRKMSKICR
TPPPQKSKKGKKTPQSRGRGTKKKNLPTKRTIKRRLMKLKEEEEEERKEEEQMELEYMDS
DDEKKKEVVEVEKIEEVEKEEEYTFPLMQEWIPIERAEPFSFLTFRPVEMASSADAPGGK
RARSTVLGQFGRSVIIGPEPRELPGGKHHSLSTMMMVSADQLRAHLQRQAQTFNDLSSTR
SKVQTVKRRQLGQTTEVGLRYELQAAVTPWIGNLLIPAKTRLTVADALREQQEKTQLSST
AVFLLLLQTMKVDVVGCKEMIEQRRSRGSSVTPPPDPATNNPRNIARPRQQREARDGPLQ
LDMELILNQLQALQQQDKHNRQQQQQRLQQLLLLQQPPPRLPSLPPPLGILPQMLPNMHP
GMSPMSSPQAVFIPHPVTQPRGASIQLMPPRFLTAPPPGLHTPPAGVVTCPFPALPAPHR
LPPVSVVPVPLNTTSACSASSPQPAGPQNLIVTLPGSLNHHVPIGSTPASQLLLTPSNAS
GPITCPGQPHPAPSPSTSIPKPLEGRGQQVAEDPEASSGQSGELLNRAVNGVDRKGEGIE
EGRRILKTSLTLQEVTESKAEAGRAQIQNTACTALIQLVPQTPPTSATMSPTPPQRPPPA
GVDSSPLTRTDTPSHAPLLIGDTTPPAAALRLNATPARSDRTVSSTQNFSLAPPPSKPTN
QPSASSTSGHPAPLHSDHNYTISCYPTNSHHGSTSVKQRPAPKRRKPRRRKSDSTPKKPP
KAPPKGRKRARVEEQQSVTSSQENQCVGRTGDGVGGTGDGGKGTGDGGKGTGDGVGGTGD
GVGGTGDGGKGTGVIQEGKRVRKPSQRARAVQEAVQEKAEAKMKRTSSSSPCKKRSRLSR
SKQEVVVQNPPVLPGFCLLPGQSMWVMTPGGLVQLAEGLPQGLRLAFVPSTPLPAQHGNI
LTCHQATPPVQSAAGPAPIILPGLNQPQPLPAPPTCPSKPLPPASTLKPPPKTVSAILSS
MRTKPGVDPVAPPRLRREALEFDPALMFLESPAEVRDWLSGRGGVGLPGVDVTLPYLPPF
VSSLNTLSALLRVKKALTKSCLQLLCRGSEPHRPRPRPDSSAKRTPSTDLPDSTSDLRPA
ADKPSSTSAPAVSSTHLEEEEAELVATVRQLVAERFSDNPAYQLLKIRFLSCFTVPALLA
TMQPITNKTVTRPSSEEEEMEEVDDEEEELKNIKERGRRRKAERSLLLRDGSGAPANHFS
GINTSPPSTDLDQITLDRTAPDRTTPVFCSSADMLDELKMKSQFEVGDGLK
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtctctgtcagcagagagagacaggatccagagacaggtggaagagctggaa
cagagtctgtctgcaacacacactgaactggagctgctgagcagtgagacaggtgatgaa
tcagatgacgaggacgaggaggaggaggagcagtctgaacagaattccctcctgcagtgt
gagtctgcagccggtctattggctcagagagagaagatccagaaggagatccagaacctg
gagaacgtcctgggaccacacagtccaatctacgcgtcagatgacgatgatgatgccagc
agcagtgacgagagtgagctgggtctgtcgctgtcagtgggctcatgtcttcagatgaac
ctggtctatcagcaggtggttcaagagaccctggaccagctggagacactgctgacacac
aaccagaaacagcagaaggaggtggtgtctcagctgtccggaccagtcaaagagtcaccc
agggaacgttgccctccgtcctcctgccagcagccgtttaacatgttcctgggacgcttc
ctcaaaccgtacttcaaggacaaactgacaggcctgggtcctccagccaatcaggagaca
aaggagaaggccaataggatggcgggctgtctggacaacaataagcttaaactgaaacga
tgggaaagctggcagaagactctgttgatccactcagtagccagagacagtctgaggaaa
ctgatccagcccaaactctccaaggtggactacctgactcagaagctgtcctcagcagtg
gagacagacaggcagcagctcagagagcagatagacagtctggagagagagatcgacctg
ctcagagggaagaaggaggaggagcttattggtgatcgatatgaagaacatgactggcag
aaaatctctaatattgattttgaagcaacgagggatgcggacgacatccggtgtttctgg
cagaacttcctccacccgtccatcaacaagactcggtggagtcaggaggaggtgcagcag
ctgaaggagatcagcatgagacacggagagagacactgggagaccatcgctgcagagctg
gggacggggaggacggccttcctgtgtcttcagacgtaccagcgtttcgtctcggcctcg
ttgagacacagcagctggactccggctgaagacgctctgctcagagagctggtggacaag
atgaggatcggaaacttcatcccctacacgcagataagttacttcatggaaggtcgtgac
cccgcccaggtgatctaccggtggtgccaggtgctggacccgagcctgaagaaaggtccg
tggaccaagcaggaggacgagctgctgatgagggcggtgtctctgtacggagaggggaac
tggtggaggatccggttggaggttcctggtcgcaccgacagcgcctgcagagacaggtat
ttagacactctgaaggtggaaacaaagaaaggcccgttcgacaaacaggagagggagcag
ctgctgcagctggtggagaaacacggagtcggtcgctgggcgaggatcgctgctgagatt
cctcaccgtaacgacgctcagtgtctcagagagtggaggaaaatgtccaagatctgcaga
actcctccacctcagaaaagtaagaaaggtaaaaaaacaccacagagtcgggggagaggg
acgaagaagaagaacctcccgaccaagaggaccatcaagcgccgactgatgaaactgaag
gaggaggaggaagaggagcggaaggaggaggagcagatggagttggagtacatggacagt
gatgatgaaaagaagaaggaggtagtggaggtggagaagattgaggaggtggagaaggag
gaggagtacaccttccccctcatgcaggagtggatcccaatagaaagagcagaacctttc
agcttcctgacctttcgaccggtggagatggcttcctctgcagacgcccccggtgggaaa
cgtgcccgctccaccgtactgggccagttcggacgctccgtcatcatcggaccggaaccc
agagagctgccgggggggaagcaccacagcctcagcaccatgatgatggtgtcagctgac
cagctccgagcgcacctgcagcgccaggcgcaaaccttcaacgacctgagctccacccga
agtaaggtccagaccgtcaaacggaggcagctgggccaaacgacggaggtggggctgcgc
tacgagctgcaggccgccgtgacaccgtggatcgggaacctgttgatcccagcgaagacg
agattgacggtggccgacgctctgagggagcaacaggagaagacccagctctcctcaacc
gccgtcttcctgctcctcctccagaccatgaaagtggacgttgtgggctgtaaggagatg
atagagcagaggaggagcagggggtcttcagtgacacctcctccggaccctgccacgaat
aaccccaggaacatcgcacgacctcggcagcagagggaggccagagacggtccgctgcag
ttagacatggagctgatcctgaaccagcttcaggcgctgcagcaacaagacaaacacaac
aggcaacaacagcaacaacgtctacagcaactcctgctgctgcagcaaccgcctcctcgc
ctcccatcgctgcctcctcctctcggcattcttcctcagatgcttcctaacatgcatcct
gggatgtctcctatgtcgtctcctcaggctgtcttcattcctcaccctgtcactcaacct
cgtggtgcctccatccagctcatgcctccccgtttcctaacagcaccccctccgggactg
cacacacctcctgctggggttgtcacttgtccgttccctgcacttcctgctcctcataga
cttcctcctgtctctgttgtcccagtgcccctgaacaccacatctgcctgctctgcctct
tccccccaaccagctggacctcaaaacctcatagtcaccctgcctggttccctgaatcac
cacgttcctattggatctacacctgccagtcagctccttctgactccctccaacgccagc
ggccccatcacttgccccggccagcctcatcctgcccccagtccatctacctccatcccc
aaacctctcgaagggagggggcaacaggtggcggaagacccagaggccagcagcggtcag
agtggggagcttttgaacagggcagttaatggtgtggacaggaaaggggaagggatcgag
gaaggaaggcggattctgaagacgagtctgactctgcaggaagtcactgagtccaaggct
gaagccggcagagctcagatccagaacaccgcctgcaccgctctgatccagctggtgcct
cagactcctcccacctctgcgaccatgtcccccacgcctcctcaaagacctcctcctgct
ggggtcgactcctctcctctgaccagaactgacacaccttctcatgctcctcttttaata
ggagacactacacctcctgctgctgctctcagactgaacgccacacccgcccgctctgat
aggacggtgtcttcaactcaaaactttagtttagccccgcccccctccaaacccaccaat
cagccctctgcttcctccacttcaggccaccctgctcctctccacagcgatcataactac
accatttcttgctaccccaccaacagtcaccatggctcaacctcagttaaacaaaggcct
gcccccaaacgccgaaaaccccggcgccgtaaatctgactccacccccaaaaagcctcct
aaagccccgcccaaagggaggaaacgagcgagggtggaggagcagcagagtgtgacaagc
agtcaggaaaaccaatgtgtgggcaggacaggtgacggcgtgggcgggacaggtgatggc
gggaaaggtacaggtgatggcggcaaaggtacaggtgacggcgtgggcgggacaggtgac
ggcgtgggcggaacaggtgacggcgggaaaggtacaggtgtgatccaggaaggaaagagg
gttcggaagccgagtcagcgagccagagctgttcaggaggcggttcaggagaaggctgaa
gccaagatgaaaagaacttcttcttcttctccttgtaagaagcgctcccgtctgtctcgc
agtaaacaggaagtggttgtccagaatccgccggtactccccgggttttgtttgcttccc
ggtcagtccatgtgggtcatgactcctggtgggctggtccagctggcagaaggtctgccc
caaggcctgcggctggcgttcgtaccaagcactccccttccagctcagcacgggaacatt
ttaacttgtcatcaagccacgccccctgtacaatctgccgctgggcccgcccccataatc
ttgccaggactgaatcagccacaacctcttcctgccccacccacttgtccttccaagccc
ctccccccagcctcaaccctaaaaccacctccaaaaaccgtctccgccattctctcctcc
atgcgaaccaagcccggtgtggacccagtggcgcctcctcgtctcaggagggaggcgctg
gagttcgaccctgccctgatgttcttggaatccccggcggaggtgcgtgattggctgagt
ggtcggggaggggtggggctacctggagtggacgtgactcttccctacctgccccccttt
gtcagcagtctgaacacgcttagtgcactgctccgggtcaagaaggccctgactaaatcc
tgcttgcagctgctgtgtcgcgggtctgaaccccatcggcctcgacccagacctgacagc
agcgccaagaggacgcccagtactgacctgccagactccacctctgacctcagacccgcc
gcagacaaaccaagtagcacatcagctcccgctgtcagctccacccacctggaggaggag
gaggcggagcttgtggcaacggtgcgtcagctagtggcggagcgtttctcagataacccc
gcctaccagctgctgaaaatccgcttcctgtcctgcttcactgtccctgccctcctggcc
accatgcagccaatcacaaacaagactgtaacgcgcccatccagtgaggaggaggagatg
gaggaggtggatgacgaggaggaggagttaaaaaacatcaaagaaagaggaagacggagg
aaagctgagagatctttgctgctgcgtgatgggtccggagctccagccaatcacttctct
ggaatcaacaccagcccgccctccaccgacctcgaccagatcactctagaccggaccgct
ccagaccggaccactccagtgttctgttcctcagccgacatgttggatgagttgaaaatg
aaaagtcagtttgaggttggagacggtttaaagtaa
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integrated database retrieval system
