Micropterus salmoides (largemouth bass): 119891567
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Entry
119891567 CDS
T07309
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
msam04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119891567 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119891567 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119891567 (mgrn1b)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119891567 (mgrn1b)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119891567 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119891567
NCBI-ProteinID:
XP_038559251
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTLVEDGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKNPLMVSETVHYKRGVSQQFSMPSFKMDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDGRSLELHYNCLGHAHVLLAAFERHVDGSFSV
KPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCR
HLCLCNSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEH
SGTDSVPPGFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGLGSDSRQLSSPEHLSDG
SLQKGKVSKSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTMLSTSPAPTDATATEDVAES
LSPDDEDRMHSGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSTESTESLKSQSTNCSSQ
PLLCPTSSLHLEDEHP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgcagaatcgctggtgtcgaggacatcgatatccaggctaac
tcggcctatcgatttccaccgaaatccgggaattattttgctagccacttcttcatgggg
ggagagaaatttgacacaccacatccagagggatacctttttggtgaaaacatggatctg
aattttcttggaaataggccagtgcagtttccatatgtgacgcctgcaccccacgagcct
gtgaaaaccctgaggagcctggtcaacattagaaaggactctttgcgcttggtcaggtat
aaagatgactcagacactctggtggaggacggtggaaaaccaaaggttcagtatggtgtg
gagttcacctttgatgctgatgcccgggtggccatcactctctactgccaagcatttgag
gagttctccaatgggatggcagtttacagcccgaagaatccattaatggtctctgaaact
gtgcattacaagcgaggggtgagccaacagttctccatgccgtcattcaagatggatttc
agtgagtggaaagaggaggatctgaactttgacctcgaccgaggagtgtttccgatggtt
atccaagctgtggttgatgaaggggacggtaggtcactagagctgcattacaattgcctt
ggacatgctcacgtacttttggcagcctttgaaagacacgttgatggcagtttctccgtc
aagcctctgaagcagaagcaaattgtggaccgtgtgagctacctcttacaggagatctat
gggattgagaacaaaaacaaccaagaaaccaagccatcagatgacgagaacagtgacaac
agcaatgagtgtgttgtttgtctgtctgacctgcgagacacgctcatcctgccctgcaga
catctgtgtctctgcaactcctgcgcagacactctgcgttaccaggccaacaactgtcca
atctgcaggctgcccttcagagccttgctgcagatcagagccgtgaggaaaaagcctggt
gctctttcccccgtgtccttcagccccgttctggctcagactatggaccatgacgagcac
tcaggcacggactcggttcctcccggctttgaacccatctcgttgttggaggctctgaat
ggtctgaggtcggtgtctcctgccatcccatctgctcccctatatgatgaaatcaacttc
tccggaggtctgggaagcgacagcagacagctgagctccccggagcatttaagcgatggg
agtctgcagaaaggcaaagtcagcaagtcacccgacagcacccttaggtctccatcctct
cccatccaggaggaagatgaggagaagctgtctgagatgtctgatgctcagccacacaca
atgctgtccaccagccccgcccccacagacgccacggcaaccgaggacgtggcagaatcc
ctgtctccagacgatgaagacaggatgcattctgggggagacatcctacaggactgcagc
agtgaacacagcagcttgaccaaaacagagagcgacccaccgggcgacttgtctctgcca
gggtcatcaacagagtcaacagaaagcctgaaaagtcagagcacaaattgctccagtcag
cctctcctgtgtcccacaagcagccttcatttggaggatgaacacccctga
DBGET
integrated database retrieval system
