Micropterus salmoides (largemouth bass): 119891682
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Entry
119891682 CDS
T07309
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119891682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119891682
Membrane trafficking [BR:
msam04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119891682
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119891682
RAVE complex
119891682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_DCAF12
Beta-prop_WDR19_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
119891682
NCBI-ProteinID:
XP_038559422
LinkDB
All DBs
Position
Unknown
AA seq
3096 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLQGRQIAASYGSTVCVFEPVQDPDQKDTSLTTVNCQWQKTGQFVLKSIVRNLAW
HPTGSSLLTGSSSLQLWSYIDGVKDEAEDVLKQTDITIRDSLSCWRCIWQSKTASPVSLI
KFSPDGEFFATAGQDDCLVKVWYSTSKWKSGVSRLFTPPEPSVSVQGQLAFSFIYLAHPR
SVTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLSGYSTSGQHSDTLG
CPGPSSKNSCNGKMQGRTAQELNFQESLHSSFYRDVPQPSLTGCLPHNQSQHYNHKKSSS
IMPHANALCHFHIAASINPATDIPLLPSISSLSAVDDEEPGGPFTVHWLNNKELHFTLAM
EVFLQQLRGSLEQRNSGCSHEEPEDEDNFDEDNSTRPSDPEAGELPLAAVKHQVDVLLEE
WNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDAISLSHS
VVMYACNKNVDLAIQHGRQRPPGSTLPQTKSALISYGGQGKAAPSSSLRLSIFTPNVLMI
SKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNA
LRTPEADNILTPPDTCSSGFSHSTSLSRGSRPSRVSLGMVSQDPNAIYSELILWRVDPVG
PLSLSGGVSELARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGHSLRLYQ
AVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDVITGFQGKETQLLHVFE
EDLILGSERAETTQETPDSPHTASSEPAFSARFFLVVVELTPAGRSLLHMWHLHLAAQPV
TMEDTTTEKDAATASPMNSSQFNFDTFSSPVTQKSKPCTSNLQSASRLNLTTHRLYSQEM
ALPEGVEAISVTPAAGHLSASCSLPARRVPYLFATSCSDGKVRFWRCNVIATNPSSMDNL
VYQWEEWPLLVEERFPNSSGVSVQGRPIEISCCHTGRIAVAYRQMPNAALNSLNCVGPTT
SPPTLASSPNVHYNSSMHLTPTLTVQRSPNIIPSPNPGNAREPLVHIGIFQCESTGGSQW
ILEQTIVLDSTDPTANYGFSNSTAGSTNEPSNKDSLIPNENCHGYGSKSLVHLDWVSQEN
GSHVLTVGIGTKIYMYGCLSGKPPELGLSSDASRDKSLSRLVLLRSVDLVSSVEGSLPIP
VSLSWVRDGILVVGMDCEMHVYSQWQPPAPPKPNAPTAQDTDISSSLSSIISAVRQSQEE
GLSSGAPMSSLAPPKKALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAQQLFPTLPQ
YHPVQLLELMDLGKVHRAKAILSHLVKCIAGEIIALKDGTSNPEKRVRSRTISAGGSTAR
DQKMFRKAENSTPDYTEISSIPPLPLYALLAADEDTLPKPEKVGSFSGDSGHGSSHTDAY
DELFQTPSMADLDPLDKDEEELGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTSM
EQMSLMALADTIATTSTDLKDSQSKSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHRVQ
LLQQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRRCIE
KVARASLQRNNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTDFFRNNFSEDRWRKAALK
NAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETNSTYKK
ILQRHVLGQDKQIQAHHDPFLRSMAHWVLEDYSRALDTLLDQPANSASSASTESKCDAGP
SPVSTCNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERRLFFTAA
YAHLQAGCPMLALEVLCKMPKVRKHSKLPNQADTSITAESVGSKNGKTSDPDWSQSALND
YKSEGSSLSNSQSDSLLSFDWSQPSLTLPDESLELKWDSDKDDEDDEGEDEIKNGGRPVE
SSSVFQDTQDAMSPLMETGEDSEDGNDFLAPSDDILAAQLKFTACLKIMTNELRTLSTGY
ELDGGKLRYQLYQWLEREVVALQHCCSYKPCLPELSVQGDAPVSGLVEEERPGSPRGDSQ
RSRRHWLQRNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSIQSAVTPCSE
QTSIPLLMACTANVKTVVANPIVYLTNLTHDILQTINALDSPPHPDVVNNEIYVMHTLAA
SLSACIYQCLCDGHTHSHVNHFTGIIYQSVLLSQKQQVRTVSMDESVQPNTSPSQWPGIA
SLIRLLSSAGEESQPGLTVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLSSKLWVT
VFGGGARTPVMEKSKSPTRTPSPASPSGSDRKSRRFRLLSSRSVSREESPSSPKHGPVVD
QEAAPIFKERFVPPELSIWDYFIAKPSLPPSESRIEYDSEDSQGSEDEDEDDEFEDVFDP
NSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVGSPLCHAVLKTLQR
WEQVLLKRLEIFGGPPAKYISTQFQDETAASGPALLRHKALFEPSNTPFRTSHTSSLPVK
RLWQFLVKQEEVQETFIRHIFTKKRDPNESGEDQTDNMKCSGMEETGNHQTESDQGCPGG
KARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDDAVAEAK
SDDFLVVHARNDFATLHGTTPYTHSSPGTPINMPWLGGLQTGRGASVMIKRNINNVRRMT
SHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGGL
SLWQTNTSGNAPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSSDNRNVCMWDTLVTPAN
SLVHAFCCHESGATVLSMAPRQQLLITGGRKGWISILELPHRHQRQSFQAHDSPVKALAV
DPTEDCFISGSSEGNIKIWSLTTQCPLYTFPNEHSRQSLFRNLGTGVMQIEVGPNNHIFS
CGADGTMKMRVLPNRFNVVNNNNNHDNLKNDVKFII
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggggctgtcaaccctggagacaattgtttctctgta
gggagcgtcaacaatgtgccattcacggcctatgcatcagggtgtgacgtggtgattttg
ggcagtgactttgagcgactgcagatcatcccaggggccaaacatggcaacatccaggtt
ggctgtgtcgactgctcactgcagggtagacagattgcagcttcctatggaagcactgtg
tgtgtttttgagcctgttcaggacccagatcaaaaagacacatcgctgactacggtgaac
tgccaatggcagaagactggtcagtttgtattaaagtccattgtacggaacctggcctgg
catcctacaggcagttctctcttaactggctctagtagcctccagttgtggtcttatatt
gatggagtgaaagatgaagctgaagatgtgttaaagcaaacagacattaccataagagac
tctctatcttgctggaggtgcatctggcagagcaagacggcctctccagtcagtttaata
aagttctcccctgatggggaattctttgctactgctggacaggatgactgcctagtaaag
gtctggtacagtaccagtaagtggaagtcaggtgtttccagactcttcacacctccagaa
cccagtgtcagtgtccagggacagctggccttttcctttatctacctggcccatccccgc
tctgttaccggcttctcttggaggaagaccagcaaatacatgccacgaggtgcggtgtgt
aatgttctgctcacctgctgtaaggacagcgtatgccggctttgggcggagacgctgttg
ccgggtgacagcctcctgtccggttactccacctctggccaacacagtgacacacttgga
tgtcctggcccttctagcaaaaactcctgcaatgggaagatgcaaggaagaactgcccag
gaattgaattttcaggaatcactgcacagctccttttatcgggatgtgccccagccctca
ctgactggctgcctgcctcacaaccagagccaacactacaaccacaagaagagcagcagc
atcatgccacatgccaatgctctctgccactttcacattgctgccagcatcaacccggcc
acagacattcctctgctgccctccatctcctctctgagtgccgtggatgacgaggaacct
ggaggtccttttactgtccactggctcaacaacaaagagcttcatttcaccttagctatg
gaggtctttctgcagcagctccgaggcagcctggagcaacggaacagcggatgctcccat
gaagagcctgaagatgaggataactttgatgaagataatagtaccaggccaagtgaccct
gaggctggtgagcttcctctggcagcagtgaagcaccaggtagacgtgctgttagaggaa
tggaataaaggggcagacatgttgttcagtatccatcccatggacggctctctgttagtc
tggcacgtggactggttagatgaataccagccaggcatgttcagacaagctcaggtgtcg
tttgtgtctcgtatccctgtagcgttccctacaggcgatgcaatctctctgagccacagt
gtggttatgtatgcctgcaacaagaatgtggatctggctatccagcatggaagacaacga
ccgcctgggagcacattacctcaaaccaaatctgctctaataagctacggaggtcaagga
aaagctgcacccagcagtagtcttcgactaagcattttcacccccaacgtccttatgatc
tccaaacatgctgatggctccctgaaccagtgggctgtcagcttcgcagaggactccgct
ttctccactgtgcttagcgtctctcacaagtcacggtactgtggccaccgcttccacctc
aatgacctggcctgtcattcgttactccctctcctgcttaccacctcacaccacaatgcc
ttgaggaccccagaggcagacaacatcctgactcctccggacacctgctcctctggtttc
tctcattcaacatctctatcccgtggctcacggcccagccgggtgtccctgggcatggtt
tcccaggatcccaatgcgatctacagtgagctgattttatggagagtggaccctgtcggc
cctctgtctttgtcaggcggggtctccgagctagctcgtatcaattctctccatgcatca
gcatttgctaacgtagcttggctgcccacgctcattcccagcagctgtttaggtgtgtac
tgtaactctcccagcgcctgctttgtggcaagtgacggccactcactcaggctgtatcag
gctgttattgaagctaagaaactcctgagtgagctctccaatcctgagatatccaaatat
gttggggaggtgttcaacatcatcagtcagcaatccacagcaaaacccgggtgtataata
gagctggatgtcattactggctttcaggggaaggagacacagctcctgcatgtttttgag
gaggatctgatcctcggtagtgagagagcagagaccacgcaggaaactcctgattctcct
cacactgcctctagcgagccggccttctcggcacgttttttcctcgtggtggtcgaattg
accccagcaggtcgctctctcctccacatgtggcatctccatcttgcagctcaacctgtc
accatggaagataccacgacagagaaggatgccgccacagcttctcctatgaacagctct
cagtttaactttgacacgttcagttctccggtaactcagaagagtaaaccttgcacttcc
aatctgcagagtgccagtcgcctcaatctcacaacacacaggctatacagccaagagatg
gctctgccagaaggggtggaagccatcagtgttacacctgcagcaggtcacctgagcgca
tcgtgttccctgccagcacgccgcgtgccttacctctttgctacttcctgttctgatgga
aaggtgcgcttctggaggtgtaatgtcattgcaacaaatccttccagtatggacaatctg
gtgtaccagtgggaggagtggcctctcctggtggaggagaggtttcccaacagcagcgga
gtaagtgtgcaaggtcgccccatagagatcagctgctgtcacactggacggattgcagtt
gcctacaggcagatgccaaatgcagctctgaactcactcaactgtgtcggaccaacgact
tctcctcctacactggcttcctcccctaatgtgcactataacagcagcatgcacctgacc
ccaaccctgactgtacagcgtagcccaaatatcattcctagccctaacccaggaaacgct
agagaaccattggtccacattggcatcttccagtgtgagtccactggtggttcgcagtgg
attctagagcagaccatagtcctggacagtacagatcctacagctaactatggttttagc
aatagcacagctggaagtacgaatgaaccaagtaacaaggactccttaataccgaatgag
aactgccatggttatggaagtaagagcctggttcatttggactgggtgtcccaagagaac
gggtcacatgttctgactgttggtattggcacaaagatttatatgtatggctgtctctct
gggaagcccccagaactcggtctatcatctgatgccagtagagacaagagcttgtctcgc
ctggttctgcttcgatcagtcgatctggtctcttctgttgaaggctcattgcccattcca
gtctccctctcctgggttcgagatggcatcttagtagtaggcatggactgtgagatgcac
gtctactcccagtggcaacccccagcaccacccaaacccaatgccccaactgcccaagac
acagacatcagcagcagcctttcgtccataatctcagccgtcagacagagccaggaggag
ggtctcagctctggggcccccatgtcttcactggcccctccgaaaaaggccctgacaaga
tctatgatgagcttggctcagaaactcagtgggaagagaaccgcttatgacctacctgtg
gagatggaagattctgggctttttgaagcagcgcaacaactttttcccacactgccacag
taccatcctgtacagttactggaactcatggatctagggaaggttcaccgtgccaaagcc
atcctctcgcacctggtgaaatgcattgctggagaaattatagcacttaaagacggtaca
agcaatcccgagaaacgtgtgcgctcccgaaccatcagcgctggaggcagcacagccagg
gaccagaagatgttcagaaaagctgagaactccacccctgactacacagagataagctcc
atcccccccctgcctctgtacgcccttctggcagctgatgaggatacactaccaaaacct
gaaaaagtgggcagcttcagcggagatagtgggcacggttccagtcacactgatgcttat
gatgagctctttcaaacacccagcatggcagacctggaccctctggacaaggatgaagag
gaactggggaacaaggttattgacctgtcccagtacagtccaacatactttggtccagaa
catgcccaggttctgtccagtcacctccttcattccagtttgccaggcttaaccagtatg
gagcagatgtcgctcatggcgctggctgacaccatcgctaccacaagcacagacctcaag
gacagccagagcaagagcaaaggtggagagacactggatgagtgtggcctgaagttcttg
ctggctgtcagactccataccttcctctctacctccctgcctccagcacaccgagtacaa
ctgctacagcaaggcctgtcaacatgtcattatgcctgggccttccactctgaagctgag
gaggagctgctgaacatgctgcctgccctacagaagggagagcccacctggcctgaactg
cgctccatgggtgtgggctggtggctgcgcagcaccaacaagctacgacgatgtatcgag
aaggttgccagggcttctttacagagaaacaatgatcctctggatgcagctatattctat
ctcgcactgaaaaagaaggcagtggtctggggattgtacaggtctcagaagaatgccaaa
atgacagactttttccgcaacaacttcagcgaggaccggtggaggaaagcagcactgaaa
aatgccttttctctgttgggaaagcagcggttccagcattctgccgccttcttcctccta
gccggctcccttaaggatgctgttgaggtgtgtttagagaaaatgcaggacctacagctg
gccctggtgatctccagattgtacgagtctgagtttgagacgaattccacctacaaaaag
atcctccagagacacgttctgggacaagacaaacagattcaagcccaccatgacccgttc
ctgcggagcatggctcactgggtcctggaggactacagcagggccttggacaccctcctt
gatcagcctgccaacagcgccagctctgcgtccactgagagcaaatgtgatgctggtccc
tctcctgtgtctacatgtaaccctgaggttttcaatttttacacctaccttcgtacccac
ccgcttctccttcgccgccattttggctcttcagacaaggccaaagttggcctgaccgct
gagggtcgcagggctgactccatcagcctggaggagagaagactgtttttcacagctgca
tatgcacacctgcaagctggctgccctatgctggcacttgaagtcctctgcaagatgccc
aaagtccgcaagcattccaaactccccaaccaggcagacacaagcatcactgctgaaagt
gtcgggagcaagaatggaaaaacatcagaccctgattggtctcagtcggctctgaacgac
tacaagtcggagggaagcagcttatccaacagccagtcagactcattgttaagttttgac
tggagccagccgtcactgacgcttccagatgagtctctggagctgaagtgggacagtgac
aaagatgatgaagatgatgagggtgaagatgaaattaaaaatggtggtagacctgtagaa
agcagcagtgttttccaggacacacaggatgccatgtcgccgctaatggagacgggagag
gacagtgaggatggcaatgacttcctggcaccatctgatgacatcttggcagcccagcta
aagtttactgcctgcttgaagattatgaccaatgagctccggacactgtcgacagggtac
gaactggatggagggaagctacgctaccagctctaccagtggttagagagagaggtggtg
gctctccagcattgctgcagttacaagccctgcttgccagagctgtctgtccagggtgat
gcccctgtttctgggttggtggaggaggaacggcccgggagtcctcgtggtgacagccag
aggagcaggaggcactggctgcagcgtaaccagcccttactgaggatgtttctgagctac
tgcagcttacacggctcccacggtggaggactggcctctgtacgcatggagcttatatta
ttgcttcaagagtctcaccaggatgactccatccaatcagcagtgacgccatgttctgaa
caaacctctatccctcttctgatggcttgcacggccaacgtaaagacagtggtggccaat
cccatcgtctacctgaccaacctgactcatgacatcttgcagaccatcaatgcgctcgac
tcgccgccacatcccgatgttgtcaacaacgagatctatgtgatgcacacgttggctgcc
tccttgtcagcctgtatttatcagtgtctgtgtgatggacacacccacagccatgtgaac
catttcacaggaatcatatatcagagtgtgttgctctctcagaagcagcaagtcagaact
gtcagcatggatgagtctgttcagcccaacacttccccttcacagtggccaggtatcgcc
tctctgattcgtctgttgagctcagcaggtgaggagagccagccaggcttaactgtgctg
ctctgtgagatcctgactgctgtcttcctcagtctgtttgttcacggcatggccactcac
tccagcaacgagctgtttcgcatcgtggcccaccccctcagcagcaagctttgggtgacg
gtgttcggaggaggtgcccggacccctgtgatggagaaatccaaaagcccgacaagaaca
ccctcaccagcctcaccaagcggctcagacaggaagtccagacgattcaggcttctatca
tcacgcagtgtatccagagaggagagcccatctagtcccaagcatggccccgtggtggac
caagaagctgctcccatctttaaagaaagatttgtccctccagagctcagcatttgggat
tactttatcgccaagccttcgctgccaccctcagaaagcagaattgaatatgactcagag
gacagccaaggcagtgaagatgaagatgaagatgatgaatttgaagatgtgtttgacccc
aactctccgcaaagagagcattcgaaccacaattcatacagttggtgtttgatgcgtctg
gcaatggttcagctggtgttggtcaacctcaagtccttttacccaatggcaggatatgat
ctattagatctgcctgtgggctctcctctgtgtcacgctgtgctgaagacgctgcagcgc
tgggagcaggtgctgctaaaaaggctggagatattcgggggcccacccgcaaagtacatc
tccacccagttccaggatgaaactgccgcatctggtcctgccctgctcagacacaaggcc
ctgtttgaaccatccaacaccccattcaggactagccacacttcatcgctgccagtgaag
cgtctgtggcagtttctggtcaagcaggaggaagtgcaggagactttcattagacacata
tttaccaagaaaagagacccgaatgagtcgggtgaggaccagactgacaatatgaaatgt
tcagggatggaggagacaggaaaccatcagactgagtcagatcagggctgccccgggggg
aaagctcgcatcatccacaaggaatctgacatcatcacagcctttgccatcaacaaggca
aatcgtaactgtttagtcatggcctccacccatgacattcaggagttggatgtgtcctcc
atcttggccacacagatcttgacatggattgatgatgatgatgctgttgctgaagccaaa
agtgatgactttctggtggttcacgcacgcaatgactttgccaccctccacggcaccacg
ccgtacactcacagtagccctggcacacccatcaacatgccgtggctggggggactgcag
acgggccggggtgcatctgtgatgatcaagagaaatatcaacaatgtgagaagaatgacc
tcccatcccacactgccttactacctgacaggagctcaggatggtagcgtgaggatgttc
gagtggggtcactcccagcagatcatctgcttcagaagtccaggcaactccagagtcacc
aggatacgattcaaccaccagggaaacaagttcggtatcgtagatgctgatggaggtttg
agtctctggcagaccaacacaagtgggaatgcacccaaaccatacctgacgttgcagtgc
cacaacaagacagctcacgactttgtctttgtgggttcctcctccctcattgccactgcg
ggtctgtcatcagacaacaggaacgtgtgtatgtgggacactctggtgactcctgcgaac
agccttgtgcacgctttctgctgccatgagtccggtgctactgtgttgtcgatggccccc
aggcagcagctgcttatcacaggtgggaggaagggctggatcagcatcctggagcttccc
cacaggcaccagcgccagagcttccaggcccacgactcgccagtcaaagcactggctgtg
gatccgactgaggactgcttcatcagtggatcatcagagggcaacattaagatttggagc
ctgaccacacagtgtcctctctacacctttccaaacgaacactctcgccagtcgctgttc
agaaacctcggcacgggcgtcatgcagatcgaggtggggccgaacaaccacatcttctcc
tgcggcgccgacggaaccatgaagatgagggtcctccccaaccgcttcaatgttgtcaat
aacaacaacaaccacgacaacctcaagaacgatgttaagttcatcatatag
DBGET
integrated database retrieval system
