Micropterus salmoides (largemouth bass): 119891782
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Entry
119891782 CDS
T07309
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119891782 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119891782 (ttc37)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119891782 (ttc37)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_11
TPR_8
TPR_17
CFAP70_TPR_C
TPR_CcmH_CycH
TPR_12
TPR_9
CFAP70_mid_TPR
ANAPC3
TTC22_N
CABIN1_N
HAT_Syf1_CNRKL1_N
Fis1_TPR_C
TPR_Slam
DUF6979
ARM_TT21_C
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
119891782
NCBI-ProteinID:
XP_038559572
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSNKEVKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKLELPNVYQKLVDLYASSDKNKCYEMIK
KLSDIYQSDKEYLMLAKVWLQLLQLKEEEAVKKKELLQLWKQMTQLLSDCLNEEEQDNET
HQHLITAFEKAMVLMDPVPGEEHKKVSADYVKCLSKLPQEEAKLKEACESMLSLYPDQSY
PLEVLCSHYLKTGVQNKDAVSCFSRLLGLVPDSGLGHLGLGTKALEEGRFKDAINYLEQG
LKKMSCSMGWYSLAEAQFKMHRYSDSAMSCSQGLTVCVSGDKELRVKLLRLKLEALVRSG
GEKAADSALETFSQIPDAGEDLVLVALKGRAYLNKGQIDEALKVSSELVASNPNLAEGLV
LRGLGQLAQGQQQLAEESFLKAASQSPDCGEYYFLLGRLYWDMGEETRKDRSKAHTHLLK
AAKLDPQLGCVFRYLGHYYREAANDRGRARGCYKKAFELDSDDAESGAASVDLSMEQDDM
DTALAVLQSVIEKATPGSAKWAWMRRGLYHLKVGEHQQATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYCVYQAAAIKQTLGKFTEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSLMEDCRDWGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSTVSPNRATVLVPALLAGLDPSTQSHKLNQAQTLKVGERCYARALKLMSEVPSLWYDL
GLNYYRQSSLPCLAEGDQNSPTLLLEKAEQCLKKAIMMDSGNHSYWNALGVISMSKGLEN
FPLAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELRTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQTLQAYQRAVELLRPMSSTEELAFA
LGCYGRALCTSGQWEEAAHVYNSTSLQELSELTGLALAYCRAGLIQESTNAYERALAVAS
SEKEKAYILTALALLQHRDGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHSDATLAA
AALTELLKQGSASGNVIEQRCLLTCALLTLQGNYSAVQREASRAVHSNPGNPSLWALLSR
LVPQYYPKKANGGAMAGHVACLSSMTLGKRALLYSGVNQLASGRHSGEDSQRNALKTMQR
AVLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRQGLEQILMSVVSEKVRSVEEVERPL
AQTLEGWVLQQAVTGLTLGGKLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLVASGG
TILPVSVLEQLNSTVMANPTNIGAWHWLAEVYRSQGLLVQAVMAYRQSLQVASQLGLHSS
QVASLLRLALLALGPCMAGVPGNDWTTLILEATTEVLKLGSCPVALLFQALLQYVTKMAA
RETRRLLERLIIVPSQDFPVTVVQVASWYLLRHLHAKNDQELINNLLHHAKMNGDQRLLE
FHSLLAASSS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaaacagcattgaaaagtgccagagaggccataaaaaacaaa
gagttcaaagaggctctaaaacactgcaaggctgttttgaaacttgagaagaacaattat
aatgcttgggtattcatcggcttggcagccagtgaactcgaacagccagatcaggcacag
accgcttataaaaaggctgtggagctggagcctgagcagctactggcatggcagggcttg
gcaaatctttatgagaagacggatcagtgggatttcaaacttgagctacctaatgtctat
cagaagcttgttgatctgtatgcaagctctgacaaaaataaatgttatgagatgatcaaa
aagctgtcagatatctatcagtctgacaaagaatatttaatgttggcaaaggtttggctg
cagctccttcagctgaaggaggaagaggctgtgaaaaaaaaagagttactgcagctatgg
aaacagatgacccaactcctctcagactgccttaatgaagaagagcaggacaatgaaact
caccagcatttaatcacagcatttgagaaggcaatggttctaatggatcctgtaccaggg
gaggaacacaagaaggtgtcagctgactatgtcaaatgtctttctaaactgccacaagaa
gaagctaaattgaaagaggcatgcgagtccatgctgtccctctaccctgaccaaagttat
cctcttgaagtcctttgttctcactacctcaaaacaggtgttcagaacaaggatgcagta
agctgtttctcccggcttctgggtctggttcctgacagtggattaggtcacttgggtctg
ggcaccaaagcactggaagaaggaagatttaaagatgccattaattaccttgaacaaggc
ttgaagaaaatgagctgcagtatgggatggtacagtctggctgaagctcagtttaaaatg
cacagatactcagacagtgctatgtcatgctcccaaggtctgacagtgtgtgtgtccggg
gataaagagctgagggtcaaactgcttaggctgaaactcgaggctttagtcaggagtgga
ggagagaaggcagcagactctgctctggagacattttcacagatcccagatgctggagaa
gacctagttctagtagcccttaaaggacgtgcataccttaacaagggacaaattgatgaa
gcacttaaggtgtcatcagagctggtggcatctaaccctaacctggctgagggcttggta
ctgagaggactgggtcagttggctcagggccagcagcagctggcagaggaaagtttccta
aaggcagctagccagagcccagactgtggagagtactatttcttgctgggacgactctac
tgggacatgggagaagagacccgtaaagaccgaagcaaagctcatacacatttgctcaag
gctgcaaagttagacccacaacttggttgtgtattccgctaccttggacattattacagg
gaggcggcaaatgatcgtggccgggcacggggctgctataagaaggcttttgagttggac
agcgatgatgctgagtctggagctgcctcagtggatctcagtatggagcaggacgatatg
gacactgccttagcagtacttcagtcagtgattgagaaagccactccaggctcagctaaa
tgggcttggatgagacgagggctataccacctgaaggtcggcgagcatcagcaagctaca
gctgatctgcaggcagctctgagagcagaccctgaggactgggtgtgttgggagtgttta
ggtgaggcctacttaaaccgccggagcttcacagcggctctgaaagcctttggtaaggcc
catcagcttcaaccctcctccatctactgtgtctatcaggctgctgctattaaacagacc
ctgggaaagttcacggaggcggttgcggaatacttgcagatcacagcacagcaggactat
gttccagctcttaaaggtcttggggagtgccagctgtctctggcaaaaagtttaatggaa
gactgcagagattggggagccattgacctcattcagcaagccatacagaacctcttcaga
gctgtggagctgcgtccagacttgtcttgtttgtggaagctgctgggagatgcttgcact
gcagtcagcaccgtgtcgccaaacagagccacggttctagtgcctgccctgctggctggt
ttagaccccagcacccagagccacaaactgaaccaggcccaaacactcaaagtcggtgag
aggtgttacgcccgtgctttgaagctgatgtctgaggtccccagcctttggtatgactta
ggactcaactattaccgccagtccagtctaccctgccttgcagagggtgaccagaactcc
ccaactctgctcctagagaaggctgagcagtgtttaaaaaaggctattatgatggacagt
gggaaccatagctactggaatgccctgggagtgatttccatgagcaaaggtcttgagaac
ttccctctggctcaacattgcttcatcaagtccatacaagttgaaccaaataatgttgtt
gcttggaccaacctcggcaccctgtatttgaaaaaggacaatatagagcttgcgcacgag
gccttcaagattgcccagtccttggagccactttatgtcaactgctggattggacaggcg
ctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctccgcacacatatggagggagtgaaaggatatgcctactgggtatgttccaccctgcta
gataagagcaacagggactctgaactgtaccgctacaacatagtacagatgaacgccatc
tctgctgctcaggtggctctcagcaagtacacagagaggatccagtctgaccccgatgcc
ttcattatgcttggctacctgaatgagcatctgcagctcaagaggcagaccttacaggct
taccaaagagctgtagaactgcttcggcccatgtcctcgacagaagagctggcttttgct
ctgggctgctatggccgtgctttgtgcacctcgggccagtgggaggaggcagcgcatgtt
tataattccacttcactgcaggagctgagtgagctgacagggctggctctggcctactgc
agggcaggactcatccaagagagcaccaacgcctatgaacgtgccttggctgtggcttcc
agtgagaaggagaaggcttacatcttgacagccctggccctgcttcagcaccgggatggt
aacctagactcagctaagactctgctgtttaaatgctcgatgttaaaggagccaatctca
gagtctctgctgtgtttatgtgccctgggattggtccacagtgatgctacactagctgct
gctgccctgactgagttgctgaagcaaggttccgcctctgggaatgttatagagcagcgg
tgtctgctcacctgcgccttgctaaccctgcagggcaactacagtgcggtgcaaagagag
gcttccagagctgtacacagcaatcctggaaacccatcactgtgggcactgctgtccaga
ctggtaccacagtactaccccaagaaggctaatggcggagcgatggctggtcatgttgcc
tgtctctccagtatgaccctaggaaagagggcgttgttgtacagtggagtaaaccagcta
gctagtgggagacactctggagaggacagtcagaggaatgcactgaagactatgcagaga
gctgttctgctctgccctgatgatccagcaacatgggcgggattaatggctgcctgtcac
acagaaaacacttcctgttacctttcaggttctgctccttgcagacaaggactggagcaa
atccttatgtcggtggtttctgagaaagtgcgtagtgtggaggaggtggagcgccctcta
gcccagactctagagggctgggtactgcaacaggcagtgactggtctcacgctgggggga
aagctggagcaggcagaagccctctgctcacaggtgctgaatgtttctccagaacaccca
gctgtgatgctgtcactgagacaggtacagtgtcagcgtctccttgttgccagtgggggt
accatcctcccagtctctgtgttggagcaactaaacagcactgtgatggcgaaccccaca
aacattggtgcatggcactggctggctgaggtgtatcggagccagggcctgttggttcag
gcagtcatggcttataggcagagtctgcaggtagcatcacagctcggtctgcacagcagc
caggtagccagccttctccgactagccctgcttgccctaggaccctgtatggcgggtgtc
ccaggaaacgactggacgaccctgatactagaagccaccactgaggtcttgaagctgggt
tcatgccctgtggcccttcttttccaggccctgctccagtatgtgaccaagatggctgct
agggaaacaaggcgtttgttggaaaggctgataattgtcccctctcaagacttcccagtg
acagtggtgcaggtggccagctggtacctcctcagacacttgcatgccaaaaacgaccag
gagctaatcaataaccttttgcaccatgccaaaatgaatggagatcaaagactgctggag
tttcactcactgcttgccgcctcttcatcctga
DBGET
integrated database retrieval system
