Micropterus salmoides (largemouth bass): 119891920
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Entry
119891920 CDS
T07309
Symbol
cspg4b
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msam00535
]
119891920 (cspg4b)
04091 Lectins [BR:
msam04091
]
119891920 (cspg4b)
Proteoglycans [BR:
msam00535
]
Cell surface proteoglycans
Others
119891920 (cspg4b)
Lectins [BR:
msam04091
]
C-Type lectins
Others
119891920 (cspg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF7522
TMEM154
ECSCR
DUF3377
Motif
Other DBs
NCBI-GeneID:
119891920
NCBI-ProteinID:
XP_038559838
LinkDB
All DBs
Position
Unknown
AA seq
2399 aa
AA seq
DB search
MEKLWLRGLLWWSLLLELASGASFYGDGFVQLKATESSDRNMLRVHFRTSSTNGLLFLAA
GQANYFLLELHAGRLQLKLDLGSGEQMLQSESATQLNDLAWHSVEVRHVQHNVSLTVDKN
SHTSVKMPGSHHDLNILDGLYVGGSGSLDRLYLPRDLIGFRGCMDEVVFNEHDLLSSLRP
YTGFKNVHEVSLGCSPQFFATEEDPISFFSSRAYISLRTWDAQQEAVFECVVHTSAKEGI
ILYNSAREGDFVALEIQEGLPVAIIGKGGTKTELRSLTFINDRKWHSIKLHFSSKSLELS
IDGEMVKISISSRSKGFQPKGYLFVGGIDDSTRSEVRKAGLVSVSGKRVRGGSFKGCLKN
IEVNRVKMGLSNAVVTKDISVGCEPEKEPELPTPVSPTSAPGSFFHLVTPTPSSLHMSTV
ARGLDRRYGWNFVQLKNLVVQEGGRASLEAKHIKVLLDFKKLGIRQSQIMFRIREQPIRG
QIRLDVDQDQEENTFSMLDLWHGRVMYIHGGSEEQDDFFMFSLYSSSRKQVPDYLKGNKL
YRYNITVTPTNDAPELSLPEGNLFVLLENSKKRLTTDVLKATDIDSSPTDLVFSVLGNLN
ADAGYLEIENNPGKAVTSFSYLDLEDLRVYYVHTGVRNSRIVLRVSDGEKVSNTVVLRVM
AIALEYKIANNTGLEIIQGETAIIGSKQLAVQTNALKQVVDIRYDIIEPPQYGELQRLHS
SGEWRPTDSFSQRLLEKERLRYICTFQEIQTSNATDYFKSKVNVAARAATEILFPITVKW
VNYHLVRNVVIDMDKVRKVTLDSEHLFATAVGVALSEEDLYFRVLTTPKKGKLLLDATVL
RKNSTFSQRDVTDLKVHYELVDRPYEDTSDRFKFQLISRHAQSQNYDFQFSIKADVNNVF
MRNDGLSLQEGESKLITKDNLFAETLSTKDMYYTVISSPKHGKLARISHSNSNASYNNIL
TFSNQDILEERIMYIHDDSETTQDEFTFIASTRQGFKSSIAEDEIGSKEGMFNISIQLLN
DQKPVRVIDKVFHVVRDGQKLLTIDDLRYHDADSDFDDGQLIYTRRGIPMGDLVLVNDTT
HRLFQFRQKDLEEKRVLFIHKGVSTGRFVLFVSDGKHFISSLLDISAHDPFLNVGINTGL
LVQKGRSVTISTSNFSVTSNLDIRDDQEVIFMLDLAPKYGRLFRNETKVESFSQSDLKDG
LISYRHNDSKHLADYFNLTVKAKGLRLAVRINVKVYLESHQRPPIVQHHNTLLVEEGKPV
KIDETKLELTHEDNLPSEIVFTVKVAPSHGLLRRFVEAEERYIGTKQSPVKTFTQEDINS
ANIQYMQVEPGKVNDTFILDATNGITDVSDVRMSVDIIPRLIPLQVSNFTLNEGASKALT
QDVLKVTNRHFSGINFLYSLTEPPHHGHIEHSGHPGVPITTFTRRQVEHEFIYYVHDSSE
TSADNFTVVANDTGLRKQSAAQTVYIQVTAVNDEPPVITANRVLRVWVSSVTEIRPGDLR
AQDLDTPPEELHFMVTPPSNGHLALKTGPMKPVLNFTQAHVDQGQLLFVHKGAMSGGFNF
QVNDGVNFTPRQIFSITARALILSLEKNRPLKVFPGSSTKITNEDLHAVTNDISNTSNRI
ITFSVIRHPKLGRLVMRQADNSTVDISTFTQDMVDRKEVVYIQTPTESVSWNAMDSMTFS
VASPPTSLDSQIFKIDISYENTGSEHNTVLLANTGAEVTEGDSVIIDESKLDATNLMSKL
PTPQRSSHEVWFQVTSLPQHGVIVVGERNLTKEKPNFSQFIVNKYGIIYKHDNSETTHDS
FVFSAWLNPKGKTAQRPQEDNDVVEERFNITITPVNDQPPLLKTKAPSLRVVQGDTVALR
PENLKVEDLDNRPDDIKYSVISKPNNGYLALEGSLNESIVAFTQAQIDNGSVYFIHDGSS
GSGVFYFSVTDGYHKPIYKLFNLEVTEITISLVNDTGLTLEQGKTSVSLTQNNLAAETNG
KNITIRYQITRPPNFGKVLYDNQEVTQFEQEDLHSGRLSYHMISLSSAEDSFEYTAFTSE
ANLTGQVLNITVRPLIQVGKGLRIPNGIAVKLNTRILNASELANISGSDPVFEIISHPKY
GKVVWTKPKMSRKAAPVESFTFQEVMQEKVALELNTNMTGVQELNDSVVFVLKADNIQPA
KGDFHFTVVPYDPALFPTTKSPVPTTSPVPQTPSPTSRNGTASQVLSTAFLSTQQPSKNQ
QKFKGRNRWGNSNRTSIFSTTLGKPTPETEGFPFRNTPVRVESYPQKTSSPLLVILPLLA
LLLLVIIFVVLVVFLRHHRQGKQSTAAPKEPPSTGLPSSQSYQGQTQRSTTVPTVTVTPL
NHTCPGSPVVDRLLTPNQGSAYNTTDSSMLVSSWNNGCPSSSQIIQTATPTLQKNQYWV
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttgtggctccgaggtctgctttggtggtcgctcctgctcgagctggcgtcg
ggagcttccttctatggcgatggctttgtacagctcaaggcaacagagtcatccgaccgt
aacatgctccgcgttcacttccgaacctccagcaccaacggcctgctgtttctcgccgcg
ggccaggccaactacttcctactagagctccatgctggtcgcctgcagctgaaattggac
cttggatcgggggagcaaatgttacagtcagagagcgccactcagctcaatgacctggcc
tggcactctgtggaggtccgccatgtgcagcacaacgtcagtctgactgtagacaagaac
tctcacacgagtgtcaagatgccaggctcccatcatgatcttaacattttggatggtctg
tatgttggaggctcaggaagcctggacagactttacctccccagagacctgatcggcttc
cgaggctgcatggacgaggtggtcttcaatgaacatgacttgctgtcatcactgaggcca
tataccggattcaagaatgtccatgaggtgtctttaggctgtagtccccaattctttgca
accgaggaggatcctatcagcttcttcagctccagggcttacatttctcttcgaacctgg
gatgcccagcaggaagcggtatttgagtgtgttgtgcacacgtcagccaaagagggaatt
atcctgtacaattcagccagagaaggggactttgtggctttggagatccaggaaggtttg
ccagtggctattattggaaaaggtggaaccaaaaccgagcttcgttccctcacattcatc
aatgaccggaaatggcactctatcaagttgcatttcagttccaaaagccttgagctttct
attgatggagagatggtgaaaatcagcattagctctcgctcgaaagggtttcagcctaaa
ggttatctttttgttggaggtatcgatgacagcaccagatcagaagtcagaaaggcaggg
cttgtctctgtgtctggaaagcgtgtcagaggtggttcctttaaaggatgtttgaagaac
attgaagtcaacagagtgaagatgggtctctccaatgctgtagtcaccaaagatatctca
gttggttgtgagccagagaaagagccagaactacccacccctgtgagtccaacaagtgct
ccgggatccttctttcacttggtgacaccaacaccgtcttcacttcacatgtctactgtc
gccaggggcttggacagaagatatggctggaattttgtgcagctcaaaaaccttgtggtc
caggaaggtggtcgagcatctcttgaggccaaacacatcaaagtactcttggacttcaag
aagcttggaattagacagtctcagatcatgttccgaatacgggagcaaccaattcgtggt
cagataaggcttgatgttgatcaggaccaagaggagaacaccttcagcatgttggacctt
tggcacggacgagtgatgtatatccatggaggctcagaggaacaagatgacttcttcatg
ttttcgctgtattctagcagtagaaagcaagttcctgattatctgaagggcaacaaattg
taccgctacaatattactgtgacacccaccaacgatgcacctgaattgagcctccctgaa
ggaaatctctttgtcctgttggagaactcaaagaaacgcctcaccacggatgttctgaag
gccacagacattgatagcagccccaccgaccttgtcttctctgtgcttggtaacctgaac
gctgacgcaggatatttggaaatagaaaacaaccctggcaaggcagtgacctcattctca
tatttagacttggaggatctgagggtgtactatgttcacacaggggttcgaaactcaagg
atagttcttagagttagtgatggggaaaaggtcagcaacaccgtggttctgagggtcatg
gctatagcgctggagtataagattgccaacaacacaggccttgagataattcagggagag
acagctataattggttcaaagcaacttgctgtgcagaccaatgccttgaaacaagttgta
gacattcggtatgatatcattgagccccctcagtatggagaactccagagacttcactca
agcggggaatggaggcccactgactcattttcccaaaggcttctagaaaaggagcgcctg
aggtatatttgcacttttcaagaaatccagacatccaatgccactgattactttaaaagc
aaagttaatgtggctgcaagggcagccactgaaatacttttcccaatcactgtgaaatgg
gtgaattaccatctggtgaggaatgttgtgatagacatggataaagttagaaaagtgaca
ctggactcagagcatctttttgccacagctgtaggtgtggccctctcagaggaagacctt
tattttcgtgttctcaccacaccaaagaaggggaaactcctgctcgatgccacagtcttg
aggaagaactcaacctttagccaaagagatgtaacagatctaaaagtacattatgagcta
gttgacaggccttatgaagatacaagtgacaggttcaaatttcagctgatttccaggcat
gctcagtcacaaaactatgatttccagttttctattaaagctgatgtcaacaatgtgttt
atgagaaatgatggactctcacttcaggagggagaaagtaaacttatcacgaaagataat
ctttttgcagagactttgagtacaaaggatatgtactacacagtcataagcagccccaaa
catggaaagctagcccggattagtcactcaaattcaaatgctagctacaacaacatctta
acctttagtaatcaagatatattagaggaacggataatgtacatccatgatgacagtgaa
acaactcaagacgagttcactttcatagcctccactaggcaagggttcaaatcttccatt
gcagaagatgaaattggctccaaagaaggaatgttcaacatatctattcagctgttgaat
gaccaaaagccggtacgtgttattgataaagttttccatgtagtaagggatggacagaag
ttactcactatagatgatttgcgttatcatgatgcagactctgattttgatgatggccag
ttgatttacactcgacgtggaattccgatgggagacctagtgctggttaatgacactact
catcgactgttccagtttcgacaaaaggatttggaagaaaagcgagtgttgttcattcac
aaaggtgtgagcactggcaggtttgtgctctttgtttcagatggaaaacattttatatca
agccttttagacatcagtgcacatgaccctttcttgaatgttggcatcaacactggcctt
ctggtgcagaagggcaggtcagtaactatttccaccagtaatttcagtgtgacatcaaat
ttggacatcagagatgaccaggaggtcatcttcatgttggatttggctcccaagtatgga
agacttttccgcaatgaaacaaaggtggagtcattctcacagtctgacttaaaggatggg
ctgatttcgtataggcacaatgacagcaaacacctggcagactatttcaacttaacagtg
aaagctaaaggtcttcgacttgcagtgaggatcaatgtgaaggtttaccttgaaagtcat
cagaggccacccatcgtgcagcatcacaacaccttactggtggaagagggaaaaccagtg
aagattgacgaaactaaactggagctcactcacgaggacaacctgccatctgagattgta
ttcacagtcaaggtagccccatctcatggccttctccgacgttttgtcgaagcggaggag
cgctacatcggaaccaaacagtctcctgtcaagacattcacccaagaggacattaacagt
gcgaacatccagtacatgcaggtggagcccggcaaagtgaacgacacttttatccttgat
gccaccaacgggatcactgatgtcagcgacgttaggatgtctgttgacatcatcccacgc
ctcatcccacttcaggtctctaatttcacactgaacgagggggcctccaaggcactgacc
caggatgtgctcaaagtcaccaaccgacacttttctggaatcaacttcctgtatagtttg
accgagcccccacatcatggtcacattgagcactctggacatcccggtgtgcccataacc
actttcaccaggaggcaggtggaacacgagttcatctactatgtccacgacagcagtgag
acctcagctgacaacttcactgtggtggccaatgacacaggcctgaggaagcagagtgca
gcccagacggtgtacatccaggttacagctgtcaacgatgagcctcctgttattacagcc
aacagggtcctcagggtgtgggtgtcctcagtgacagagatcaggccgggggatctgaga
gcacaggacctggacacacccccagaggagctccatttcatggtgaccccacccagcaac
ggacacctggccctgaagactggccccatgaagccagtgctcaacttcacccaggcacat
gtagaccagggacagctactgtttgttcacaaaggtgccatgtctggaggatttaacttc
caagtcaacgatggcgtgaacttcactcccaggcagatcttcagcatcactgccagagcc
ttaattctcagtttagagaaaaaccgtccactcaaggtgttcccaggctcctccacaaaa
atcacaaatgaggatttacatgcagtgaccaatgatatcagcaacacctcaaatcgcatc
attacgttcagtgtgattcggcatcctaaactggggcgtctggtgatgaggcaggctgac
aattcaactgtggacatatccaccttcacacaagacatggtggacaggaaagaggttgtc
tacattcagacccccactgagtcagtgagctggaatgccatggactccatgaccttctct
gtggcatcaccgcctacttctctggacagccagatcttcaaaatagatatttcttatgag
aatactggatctgaacacaacacagtcctgcttgcaaacaccggtgccgaggtaacagaa
ggtgacagtgtcatcattgatgaatccaagctggatgccactaacctgatgtccaagctg
ccaacgcctcagcggagctcccatgaggtctggttccaggtgacatctctgcctcagcat
ggtgtcatagtggtgggtgagagaaacctcaccaaggagaaacctaacttctcccagttc
attgttaacaaatacggtatcatctacaagcatgacaactcggagacaactcatgattct
tttgtattcagtgcatggctcaatcctaaaggaaaaacagcgcaacgccctcaagaagac
aatgatgttgttgaggagcgttttaatattaccatcacccctgtaaatgatcagccacct
ttgctaaaaaccaaagctccaagtctgagggtggtgcaaggagatacagtagccctcagg
cctgagaatctcaaagttgaagacttagacaatcgtcctgatgatattaagtactctgtg
attagtaagccaaacaatggttacctagctcttgaaggaagtttgaatgagtcgatagtg
gccttcacccaagcccaaatcgataatggaagcgtctatttcatccatgatggaagctct
ggctcgggggtgttctactttagtgtcacagatggctatcataaaccaatatataaactc
tttaacctagaagtgacagaaatcaccatttctctggttaacgacactggattgacactg
gagcaaggcaagacttcagtatcactgacacagaacaaccttgctgctgagaccaatggg
aaaaacatcaccattcgctaccagattacaaggcctccaaactttggcaaagttctgtat
gacaaccaagaggttacacagtttgaacaggaggacctacactctggaaggttgtcctac
catatgatctccctttcctctgccgaagacagctttgagtacactgctttcacttcagag
gcaaatctgactggccaagtgcttaacataactgtcagacctttgatccaggttggcaaa
ggtttgaggattcccaatgggattgctgtcaaactaaatacaagaatccttaatgcatct
gaactggctaatatcagtggtagtgaccctgtatttgaaattatctcccatcctaagtat
gggaaggtggtttggacaaaacctaaaatgtccaggaaagctgcaccagttgagtccttc
acctttcaggaggtgatgcaggagaaggtagccttggagctgaataccaacatgactgga
gttcaggagctaaatgactcagtggtgtttgtattgaaagctgataacatccaacctgct
aaaggggacttccattttacagttgtgccatatgatccagcactttttccaaccacaaag
agtcctgtcccaaccacatcacctgttcctcagacaccaagcccgacttccagaaatgga
actgcttcacaagtcctatctacagctttcctttcaacccagcaaccaagcaaaaaccag
caaaagttcaagggacgcaaccgatggggaaactccaacagaactagcattttcagtaca
actcttggcaaaccaacacctgaaacagagggttttccctttagaaacacaccagtccgt
gtggagtcctaccctcaaaaaacctccagtccgctcctggttatcttaccactgctggcc
ctgctgctgcttgtaatcatctttgttgtccttgttgtctttcttcgacatcacaggcaa
gggaagcagagcactgctgcaccaaaggagccaccttccactgggcttccaagcagtcag
tcctaccagggtcaaacccagaggagcacaacagttcccacagtgactgtcactccatta
aaccacacctgcccaggtagccctgttgttgatcggttattgacaccaaatcagggctca
gcttataacaccactgattcaagcatgctcgtaagttcctggaataatggttgtccgtca
tcttcacaaattattcaaaccgcgactcccactctgcagaagaatcagtactgggtgtga
DBGET
integrated database retrieval system
