Micropterus salmoides (largemouth bass): 119892058
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Entry
119892058 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 33A-like
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04140
Autophagy - animal
msam04148
Efferocytosis
msam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119892058
04148 Efferocytosis
119892058
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119892058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119892058
Membrane trafficking [BR:
msam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119892058
Hops complex
119892058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
119892058
NCBI-ProteinID:
XP_038560069
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MAAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKSGRLPPADVKNIIFFVRPRLELMDIIAENVFSEDKMHSSRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMEYESAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIYGKGECARHVANMMLRMKREFAGSQNQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEIYGISNGYVKLPPEKFAQKKQGEASKDLPTEPKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSVAEL
IKDITTSESFFDNLTVEQEFMTGVDTDKVNTYIEDCISQKDPLIKILRLVCMQSVCNNGL
KQKVFDYYKREILQTYGYEHILTLNNLEKTGLLKPQTSSRNNYPTIRKTLKLWMXDANEQ
NPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQG
ENRTTLVFFLGGVSYAEIAALRFLSQMEDSGMEYIIATTKLINGTTWIKSLMDRPESQTP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccacctgtcgtacggtagagtcaatttaaacattttgagagaagcagcacga
aaagagcttcgagagtttttggacaagtgtgcggggagcaaggccatagtttgggatgaa
tatctgactggacctttcggactgatagctcagtactctctactgaaggaacatgaagtg
gaaaagatgttcacccttaagagtggcaggcttcccccagctgacgtcaaaaatatcatc
ttctttgttcgtccccgactggagctcatggacatcattgctgagaatgtattcagtgag
gacaagatgcattcgtcacgagacttccacattttgtttgtgcctcggcggagcatgctg
tgtgaacagcggctgaaggagcagggcgtgttgggctctttcatcaacattgacgagtat
atcctagacctgattccctatgatggtgacctgctgtccatggagtatgaaagtgctttc
agggagtgctacttagaaaatgaccaaacaagcctttaccacacagccaaaggcctcatg
accttacaggcattgtatggcaccattccacagatctatgggaaaggagaatgtgcacgt
catgttgccaacatgatgctgaggatgaagagggagtttgccggcagtcagaatcagatc
ctgcccgtgttcgatactctgcttcttctggaccgtaatgttgatctgctcacccctctg
gccacacagctcacctacgagggtctcattgatgagatctacggaatcagtaatggttat
gtcaagttgcctcctgagaaatttgcacagaagaagcaaggtgaggcgagtaaagattta
cccacagagcccaagaagttacaactcaactcagcagaggaactgtatgcagaaatacgg
gacaaaaatttcaacgctgttggagcagcgctcagcaagaaggccaaaataatctcagct
gcctttgaggaacgccataatgccaaaacagtgggggaaataaagcagtttgtgtctcag
ctgcctcacatgcaggcagcacgaagctcgctggctaaccacacttctgtagcagagctg
atcaaggacatcaccacatcggagtccttctttgacaatctaacagtggagcaggagttt
atgactggagtcgacacagacaaggtgaacacatatatagaagactgcatttcccaaaag
gatcctctaataaagattctgcgtctggtgtgtatgcagtcagtctgcaacaatggcctc
aagcagaaggtgtttgactattacaagagggagattctccagacctatggatatgaacat
atactaacattgaacaacctggagaagacaggtcttttgaagccacagacaagctcaagg
aataactaccccactattagaaaaacccttaaactgtggatgngagacgccaatgaacag
aaccccaacgacatctcctacgtgtacagtggctacgctccactaagcatccgactgacc
caggtcttggccaggcccgggtggcgtagcatcgaagaggtgttgaagatgcttccaggc
ccacactttgaggagagacaacagctgccagccgggcttcataagaaacgccagcaaggg
gagaatcggacaacgctggtgttcttcctcggaggagtgtcatatgcagaaatagctgct
cttcgtttcctctctcaaatggaagacagtgggatggagtatattatagccaccacgaaa
ctcataaacggcacaacttggatcaaatccctgatggaccggcctgaatcccagaccccc
tga
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