Micropterus salmoides (largemouth bass): 119892073
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Entry
119892073 CDS
T07309
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119892073 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119892073 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119892073 (pdlim5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
119892073
NCBI-ProteinID:
XP_038560091
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MSSNYSATLLGPAPWGFRLQGGKDFNMPLTISRLTDGGKAAKGGISVGDMVLSIDGIATE
GMNHLEAQNKIKSCTGNLTLNLQKASSVPKPPPVAPKDNRSDIIKPVALTHLPPSPHSHP
HSTIPYNKTPRPYRGCGTESEYPAPQSPFAPFIPSPSSAFTPASSHTSPLPPPPPVSYPS
SSSSSSPPVLVPPQPSVYNTPINLYSNENACEVAMGQRRGLLESQGGALPLQFNGVPRKH
VVDTDINFYHVPTHADASRQRIMEDTEDWRPRTGTTQSRSFRILAQITGTENAPDEEADG
AKKTNEEGEEPELNSHESAVVKTMIKGPAANQGHGSRTGLITPSFGMRGNGSASVPRGPV
PARPVPQPHPKDEDTLVQMAEHIPAGTRTPMCAHCNMVIRGPFLVAMGKSWHKEEFNCVH
CRSSLADTGFVEEQGSVYCEHCYEEFFAPTCSRCQAKILGEVINALKQTWHVYCFLCACC
QRPIKNNTFHLEDGEPYCEQDFYSLFGTGCHGCEFPVEAGDKFLEALGYTWHDTCFVCAV
CCTTLEGQTFFSKKDKPLCKKHAHTLKI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagcgccactctcttaggccctgccccctggggcttcaggctgcag
ggagggaaggacttcaacatgcccctcaccatctccaggctgacagatggtgggaaggcc
gctaaaggtgggatttcagttggagacatggttctatctattgacggcatcgccacggag
ggcatgaaccacctggaggcccagaacaagatcaagagctgcactggtaacctcaccctc
aacctgcagaaggcctccagtgttcctaaacctcctcctgtggcaccaaaggacaacaga
tcagacatcataaaaccagtggccctcacccatctgcctccctcaccccattcccaccct
cactccaccataccctacaataagacccctagaccttacaggggttgcggaacagaaagc
gaatacccggcgccacagtccccctttgctcccttcatcccatcaccatcctctgccttc
acacctgcctcctcccacaccagtccgcttccccctccacctcctgtttcttacccatcc
tcttcttcctcctcctcccctcctgtcctcgttccaccccagccatcagtgtataacaca
ccaatcaacctctactccaatgagaacgcatgtgaggtggccatggggcagaggcggggc
ctattggagagtcagggcggagccttgcccttgcagtttaatggagttcccaggaaacac
gttgtggacacagacatcaatttttaccatgtgcccactcatgctgatgccagcaggcag
cgcataatggaggacacagaggactggcgcccacgcaccggcaccacccagtccagatca
ttcaggattctggctcagatcactggcaccgagaatgctccagatgaggaagctgatgga
gccaagaagacaaatgaggagggagaggagccagaactcaacagccatgagtctgcagtt
gtcaagacgatgatcaaagggcctgctgcaaaccagggccacggttcacggactggattg
atcaccccatcttttggtatgaggggtaatggaagtgccagtgtcccaaggggtcctgtc
ccagcccgacctgtacctcagccccaccctaaagatgaggacaccctggtgcagatggca
gaacacatccctgctgggactcgtacgcccatgtgtgcccactgtaacatggtcatcagg
gggccatttttggtagcaatggggaaatcatggcacaaagaggaatttaactgtgtccac
tgccgttcatcactggcagatacaggctttgtggaagaacagggatctgtctactgtgaa
cactgctacgaagagttcttcgctccaacatgcagtcgctgtcaggcaaagatattgggg
gaggtgataaacgccctcaaacagacgtggcatgtctactgcttcctgtgtgcttgctgt
cagcggccaatcaaaaacaacaccttccacctggaagatggagaaccatactgtgaacaa
gacttctacagtttgtttgggactggctgccatggctgtgagttccccgttgaggctgga
gacaagttcctggaggcccttggttacacctggcatgacacctgctttgtttgtgctgtg
tgctgcaccactctggaaggccagaccttcttctccaaaaaagacaaacctctttgcaag
aaacatgctcacacactgaagatatga
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