Micropterus salmoides (largemouth bass): 119892109
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Entry
119892109 CDS
T07309
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119892109 (cacna1ba)
04020 Calcium signaling pathway
119892109 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119892109 (cacna1ba)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119892109 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
119892109
NCBI-ProteinID:
XP_038560138
LinkDB
All DBs
Position
Unknown
AA seq
2389 aa
AA seq
DB search
MARFEDEPTSRCGGSCSTGPARGASRQPGPPGVQRMYKQTMAQRARTMALYNPIPVKQNC
LTVNRSLFIFSEDNIIRKYAKKITEWPPFEYLILATIIANCIVLALEQHLPALDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFRIDTGEQAADFPCGLEAPARTCDNGTTCKEYWIGPSFGITNFDNILFAVLTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKHNNSVLKRT
KKSKDDLINAEEGEDHFTDISSVAPPGSPFTRASMKSKNESSSYFRRKEKRIRFTIRHLV
KSQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLAEMSMKMYGLGPQ
NYFHSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVHGGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEQEEAINKKLALQKAKEVKEVSPMSAANISITAFLTRSRGNAHSSSSSICSVNSLS
YICTPGHHYLSKEQQKSVKTMSVWEQRANQLRRQNRASCEALYSELEPEERLRMSSALHI
RPDMKTHLDRPLVVEPCDGPLLGGHHRHHHKTCMPEEAETTADPPPVTHQPCLHHRHRDR
DRARMREETNDNGDTSKDGLHHVHHSHFKDYNGSKEKEGKSERSRSREGGRRHHHQSSVD
NNAGGGITSEKEHRHHHSHRHSRGGNGIVNSGGRGERRSRHNDERSSNRDGDRNSRGDSD
ANGERRRNRTHGSKGQSTVEGEKSSQREKTHTHRDRFGNSEGESLAISPQQGPGGSNWLP
ARPEDSDNQRNVRRTGQSSIQIPPVTITSPPGETTLMQMNSIDCETMTMNEKTLEDLGQS
GPKPILPYSSMFIFGQTNPVRRLCHYVVTLRYFEMSILVVIAMSSIALAAEDPVWTNAPR
NNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGT
KGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVI
AVQLFKGKFFYCTDESKGLEKDCKGQFLDYDKDEVAAMPREWKKYEFHYDNVLWAFLTLF
TVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKALSECSLEKNERACIDFAINAKPLTRYMPENMQSFQYRMWKFVVSAPFEYSIMI
MIALNTVVLMMKFHGAPDFYEAMLKNLNIVFTTLFSLECILKIIAFGPLNYLKDAWNVFD
FVTVLGSITDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKAL
PYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAINHHNNFRTFLQALMLLFRSATGEAWHE
IMLSCLSHRACDERSGSHGKQCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRD
SSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQMLLHMSPPLGLGKKCPPRVAYKRLVK
MNMPIADDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVWPNLSQKTMD
LLVTPHKPNELTVGKVYAALMIFDYYKQNRSRRLQLLQQQQQQSASGSQCKVGALFKPLL
PLTHMQEKDLPMMLNSVEPPSMLQPQPKSHANFQPQTGPSSNSLNNGGTLPGHDHIKASS
SWVMEKPKEAPRAKTKRTTSRGPSEDTPDTDVTQSLEMRKMETRASSIIPVPGSGLENQG
RAASMPRLNGELQSVPDASPMKRSASTVAPQHPQEVNLRDYTLEKPAQDRPHHHHHHHHR
RRCHHRRDRDKDREKRQRSLDKPLCGQPPGFAGPPGEPASDPAASRERGHDRGRSHERKH
HHSSTDKQRYYSCDRYCSREHCHNKSATASCAASPGEGQETTNKQGSGWVKGSPVTLSSS
SSTPSRGRRQLPQTPLALQPGVAFKTANSSPVHFVSSQASLSPGQLSRGLSEHNSVQRSS
SRHFPSPVTRISSEPFLGQGQGHGEDLGSLYGSLRDQLDVFQDAVSLSSPRAGHSSRTTL
PRIMGALSPAPQNLGVPNGYHFSFGGRTSPGSGFRASRYYQEAEADEWC
NT seq
7170 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttgaagacgaaccgaccagccgctgtggaggcagctgttccacgggcccg
gccagaggtgccagccggcagccggggcctccgggggtccagagaatgtacaagcagacg
atggctcagagagccaggacaatggctctttacaaccccattccagtcaaacagaactgc
cttaccgttaatcgctccctgttcatcttcagcgaggataacatcatacggaaatatgcc
aaaaagatcaccgaatggcctccatttgagtacttgatcctggccaccattatagcaaac
tgcatcgtgctggctttggagcaacacctaccggccttagacaaaacaccgatgtcagag
cgtttggatgacacagagccctactttattgggatattttgttttgaggctggcatcaag
atcatcgccctgggctttgcctttcacaaaggctcctacctgcgcaatggctggaatgta
atggactttgtggtggtcctaacagggatcctggccactgtgggtgctgattttgatcta
agaacactgagggcggtgagagtactgcggcccctcaaacttgtctctggcattccaagt
ctgcaggtggtattgaagtccattatgaaagccatggtacctctgctgcagattggcctg
ctgctcttcttcgccatcctcatgttcgccatcatcggcctcgacttctacatgggcaag
ttccatcgcacctgtttcaggatagacacaggcgagcaggcagcagatttcccctgtggc
ctggaggctccggccaggacctgtgataatggcaccacctgtaaggagtactggatcgga
cccagctttggcatcaccaactttgacaatatcctctttgctgttctcaccgttttccag
tgcatcactatggagggatgggtggacatcctctacaacgctaacgatgcctcagggaac
acgtggaactggctgtacttcatccccctaatcatcatcggttccttcttcatgctcaac
ctggtgctaggtgtgctgtcaggggagtttgccaaggagagagagcgggtggagaagagg
caagaattcctgaagctccgcagacagcagcaaatagagagagagttaactgggtaccta
gagtggatctgcaaagcagaagaggtgatgctggctgaggaagacaagaacgcagaggag
aaatctctggatggagcatggtacaaaaggaaacacaacaactctgtgctgaaaaggacc
aagaagagtaaggatgacctcatcaatgcagaggaaggcgaggatcacttcaccgacatc
tcatctgttgcccccccaggatcaccgttcacccgggccagcatgaagagcaagaacgag
agctcatcgtactttaggaggaaagagaagaggattcgcttcaccattcgccatctggtc
aagtcccaaagcttctactggactgtgttgtgtctggttggccttaacacattgtgtgtg
gccatagtacactacgaccagcctgagtggctcacctatgcgctatacctggcagagttt
gtattcctaggcctgtttctggcagagatgtccatgaaaatgtatggcctcggaccccag
aactacttccactcctctttcaactgttttgactttggggtgattattggcagtattttt
gaggtgatctgggctgccatcaaacccggggcctcatttgggatcagtgtcctgcgggct
ctgagacttctcaggatcttcaaagtcaccaagtactggaactctttgaggaacctggtg
gtgtccctgctcaactccatgaagtctatcatcagcctgttgttcctcctcttcctcttc
atcgtggtctttgctctgctgggcatgcaactgtttggtggccaatttaattttgaagac
gaaacaccgacaaccaattttgacacattcccagcagcaattctcaccgtcttccagatc
ctaactggggaggactggaatgcagtgatgtaccatgggatcgaatcacaggggggtgtt
catgggggaatgttctcctccatttatttcatcgtcctcactctctttggaaactacacg
ctcctcaacgtgttcttggcgattgctgttgataacctcgcaaatgcccaagagcttact
aaggatgaagaggaacaggaggaggccatcaataagaagcttgcactccagaaggctaag
gaggtaaaggaggtcagccccatgtcggccgctaacatttctatcacagcttttctaaca
cgcagtcgaggtaacgcgcactctagcagctcatccatctgcagcgttaactcactgagt
tatatctgcacccccggccatcactacctgagtaaggagcagcagaagtcagtgaagaca
atgtcagtgtgggagcagagggccaaccagctgaggaggcagaaccgggcgagctgcgag
gccctctacagtgagctggagcctgaagaacgtctccgcatgtcctcggccctccacatc
cggcctgacatgaagacccaccttgaccggccgctggttgttgaaccttgtgacgggcct
ttgctgggtggccaccatcgccaccatcacaagacctgcatgccagaggaggccgagact
actgctgaccctcctccagttactcaccagccatgcctacaccaccgccacagagacagg
gaccgggccagaatgagagaggagacaaatgataacggtgacaccagtaaagacgggttg
caccacgtacatcacagccacttcaaagactacaacggcagcaaggaaaaagaggggaag
agtgagcggtcccgcagtcgagagggaggcaggaggcatcaccatcagagctcggtggac
aacaacgcaggtggaggaatcacgagtgagaaagagcatcggcatcatcattcacaccgg
cattcccgagggggcaatgggatagtgaacagtggagggaggggagaacgaagatcccgc
cacaatgatgaacgttcgtctaacagggatggggataggaattccagaggagacagtgat
gccaatggagagaggagaagaaataggactcatggatccaagggccaatccacagttgaa
ggagagaaatccagccaaagagagaagacccacactcacagggacaggtttggtaactca
gagggggagtccctagctatctcaccccagcagggccctggggggagcaactggcttcct
gcccgaccagaggactcagacaaccagaggaacgtcagacgaactggccagagctccatc
caaattcctcctgtgactatcacttctccacctggagagaccacacttatgcaaatgaac
agtattgactgtgagacaatgaccatgaatgagaagaccctggaggatctaggtcaaagt
ggacccaaacccatcctgccttacagctccatgttcatctttggacagaccaatccggtg
aggcggttatgtcactatgttgtgacactgcgttattttgagatgtccatcctggtagtc
attgctatgagcagtatagctctggcagcagaagatcctgtctggacgaatgcccctcgc
aacaatgtgctcaaatatctggactacgccttcactggggttttcacttttgaaatggtg
atcaagatggtggaccttggcctgctgctacatcccggtgcgtacttcagagacctgtgg
aacattctggacttcatagtggtcagtggggcgctggtggcttttgcattttcggggacc
aaaggcaaagacatcagcactatcaagtcactgagagttctccgggtgctcaggcctctc
aagactatcaagcgtctgccaaaactcaaggccgtgttcgactgtgtggtcaactctttg
aagaatgtgcttaacatcctcatcgtttacatcctcttcatgttcatctttgctgtcatc
gcagttcagctcttcaaggggaaattcttctactgcacagatgagtccaagggcctggag
aaggattgcaaaggacagttcctagactatgacaaagatgaggttgctgccatgcccaga
gagtggaagaaatatgaattccattatgacaacgtgctgtgggcctttctgaccctcttt
actgtctccactggggagggctggccaactgtcttgaagcactctgtggatgccaccttt
gaagaccagggtcccagtccaggctaccggatagagatgtccatcttctatgtggtctac
tttgtggttttccctttcttctttgtcaacatttttgttgctctgatcatcatcaccttc
caggagcagggagacaaggccttgtctgagtgcagcttagaaaagaacgagagggcttgt
attgactttgccattaatgccaaacctctgacacgctacatgcctgagaacatgcagtcc
ttccagtacaggatgtggaagtttgtggtctcagctccatttgagtactccatcatgatc
atgatcgctctcaacactgtggtactcatgatgaagttccatggagctccagacttctat
gaagcaatgctgaagaacctcaacatagtcttcaccactctcttctctctggagtgtatc
ctcaagattattgcttttggtccactgaactacctaaaggacgcctggaacgtgtttgac
tttgtgacagtgctgggcagcatcactgacatcctggtgactgaaatcaatactacggac
aggctgctgaacctgagcttcctgaggctgttcagagccgctcggctcatcaagctgctg
aggcagggctataccatccgcattctgctgtggaccttcgtccagtccttcaaggccctg
ccttatgtttgcctgctgattgctatgctgttcttcatttatgccatcattgggatgcag
gtgtttggcaacattgagctgaatgaggacacagctatcaatcaccacaataacttccgc
acttttctccaggccctcatgctgctgttcaggagtgcaactggtgaggcgtggcatgag
atcatgttatcatgtttgagtcacagagcctgtgacgagcgatcggggtcccatggaaaa
cagtgcggcagtgattttgcctacttctactttgtctcctttatcttcctctgctctttc
ctgatgctgaacctgtttgtggccgtcataatggataattttgagtacctaaccagagac
tcctccatcctgggtcctcatcaccttgatgagttcatccgggtttgggctgagtacgac
ccagctgcatgtggccgaatcaagtacctcgatatgtatcagatgctgctccacatgtcc
ccacccttaggtttgggaaagaaatgtccaccaagagtcgcctacaagcgcctcgtcaaa
atgaacatgcccattgctgatgacaacaccgtccacttcacctcaaccctgatggccctg
attcgcactgccctggagattaaactggcctcaggcatggtagcccagcgattatctgac
gctgagttaaagaaggagctgtctacagtgtggcccaacctctctcaaaagaccatggac
ctgttggtgacgccacataaacccaatgaactgacagtagggaaggtttatgcggcccta
atgatcttcgactactataagcagaatcgatcaaggaggctgcagctgctgcagcagcag
caacaacagagcgcatcaggctcccagtgcaaggtcggggctctgtttaagccattgctg
cctctgactcacatgcaggagaaagatctgcctatgatgttaaacagtgtggagcctccc
agcatgcttcagccccagcccaaatcccatgccaacttccagccacagaccggacctagc
tccaactccctcaacaatggaggcacgctgccaggtcatgaccacatcaaggcatcatct
tcctgggtgatggagaaacccaaggaagcgccccgagcaaagactaagagaaccacgtcc
agaggcccatcagaggacacaccggacactgatgtcactcagtcattggagatgaggaag
atggagaccagggccagcagcataatcccagtcccaggctcaggtctagagaaccagggc
agagctgcttctatgcctcggctcaatggtgaactgcagtctgtccctgatgccagccct
atgaagcgctcagcctccactgtggccccacagcatccccaggaggtcaacctgagagac
tacaccctggagaaacccgcccaggaccgacctcaccaccaccatcaccaccaccaccgc
cgccgctgccaccaccgcagagacagagataaagacagagagaagaggcagcggtccttg
gataaacctctctgtggacaaccacccggctttgctggtccaccaggagagccagcgtct
gacccagctgcctccagagagcgaggccatgaccgcggacgctcccatgagaggaaacac
caccactcctcgacagacaagcagcgctactactcctgcgatcgctactgcagtcgggaa
cactgccacaacaaatctgccaccgccagctgtgctgcctcccctggtgagggacaggaa
accaccaacaagcagggcagtggttgggttaaaggcagcccagtgacattgagctccagt
tccagcacgccaagtcgcggacgtcggcagctcccccagaccccgcttgccctgcagcct
ggggtggcctttaagactgccaattcatcacccgtgcactttgtgtccagtcaggcgtct
ctgagtcccggccagctgagccgtggcttgtcagagcacaactctgtccagcgcagcagc
tcccgccactttccctctcctgtcactcgtattagctcagaacctttcctgggccagggc
cagggccacggtgaggacctgggcagcctgtatggcagcctccgagaccagctggatgtc
ttccaggatgcggtgtcactgtccagcccccgtgccggacattcatctcggaccacactg
cctcgcattatgggagccctgtctcctgctccacagaaccttggggtccccaacgggtac
cacttcagcttcgggggcaggaccagcccaggctctggcttcagggcatccaggtattac
caggaggcagaggcagacgaatggtgctag
DBGET
integrated database retrieval system
