Micropterus salmoides (largemouth bass): 119892113
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Entry
119892113 CDS
T07309
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119892113
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119892113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119892113
03009 Ribosome biogenesis [BR:
msam03009
]
119892113
04131 Membrane trafficking [BR:
msam04131
]
119892113
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119892113
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119892113
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119892113
Membrane trafficking [BR:
msam04131
]
SNARE
SNARE associated proteins
Others
119892113
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119892113
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119892113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
ATPase
ABC_tran
DUF815
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
119892113
NCBI-ProteinID:
XP_038560146
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVDVDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSHGSGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggggaatccaaaaatgatgatctagccactgcaattctgaaacagaag
aacagacccaacagactgattgttgatgaatccatcaatgaagacaacagcgtggtctcc
ctctctcagaccaagatggacgagctgcagctcttccgtggagatacagtactgatgaag
ggaaagaagaggcgggagactgtgtgcatcgtgctgtctgacgacacctgttccgatgaa
aaggttcgcatgaacagggtggtccgcaacaatctgagggtccgcctgggtgatgtcatc
agcattcagccatgtcctgatgtgaagtatggaaagaggatccacgtcctcccaatagat
gacacagtagagggaattactggcaacctgtttgaggtctatctaaagccatactttctt
gaggcttacaggccaatccgcaaaggtgatattttcctcgtcagaggaggcatgcgtgct
gtggagttcaaggtggtagagactgatccctctccctactgcatcgttgctcctgataca
gtcatccactgtgagggagagccaatcaggagagaggatgaggaagagtccctgaacgag
gtgggctatgatgacattggaggagtgaggaagcagttagctcagatcaaggagatggtg
gagctgcctcttagacaccctgcactgttcaaggccataggagtcaagcctccacgtgga
atcttgctgtatggacctcctggaaccggaaagaccttgattgctagagccgtagccaat
gaaactggagctttcttcttcctgattaatggtcctgagataatgagtaagctggcagga
gagagtgaaagtaacctgagaaaggccttcgaggaagcagagaagaacgctcctgccatc
atctttatcgacgagcttgatgcaatcgctcctaagagagagaagacccatggtgaggtg
gagaggcgcattgtttctcagctgctgactcttatggatggcctgaaacagagagctcat
gtcattgttatggctgccaccaacagacccaacagcattgacccagctctcaggagattt
gggcgttttgatagggaagttgacatcggcatccctgacgccaccggcagattagagatt
cttcagattcacaccaaaaacatgaagctggctgacgatgttgacttggaacaggtggcc
aatgagacccatggacatgtgggtgctgatctggctgcgctctgctctgaagctgccctg
caggccatcaggaagaagatggacctgattgacctagaggatgagaccattgacgctgaa
gtcatgaactcacttgctgtcactatggatgacttcaagtgggccctgagccagagcaac
ccatctgcactgagagagacggtggttgaggttcccaacatcacctgggaggacattggc
ggtctggatgatgtcaagagggagctgcaggagttggtgcagtacccagtggaacaccca
gacaagttcctgaagttcggcatgaccccatccaagggtgtgctgttctatggcccccct
ggttgtggtaagactctgctggccaaagccatcgccaatgagtgccaggcaaatttcatc
tctatcaaaggacctgagctgctcaccatgtggtttggagagtctgaggccaatgtcaga
gagatctttgacaaggctcgtcaagctgccccatgcgttctcttctttgacgagctggac
tccatagccaaggcccgtggcggcaatgtgggagacggtggtggagcagccgaccgtgtc
atcaaccagatcctgacagagatggatggaatgtccagcaagaagaacgtcttcatcatc
ggcgccacaaacagaccagacattatcgaccctgccatcctgagacctggccgtctggat
cagctcatctatatccccctccccgacgagaagagcaggatgagcatcctgaaagccaac
ctccgcaagagccccatcagcaaggatgtggacgtggactacctggcaaagatgaccaat
ggcttctctggagcggatcttacagagatctgccaacgggcgtgtaagctggccatccga
gagagcatcgagaatgagatccgcagagagagggagaggcagaccaacccgtcagctatg
gaggtggaagaggatgatcctgtgccagagatcaggaaggaccactttgaagaggcaatg
cgatttgctcgccgctccgtcagtgacaatgacattcgcaaatatgagatgtttgctcag
acactgcagcagagccgtggctttggcagcttcaggtttccctctagtgctgcaggtggc
agtggtccaagccatggctcaggaggaactggcagtggtccggtgttcaatgaagataac
gatgacgacctttatggataa
DBGET
integrated database retrieval system
