Micropterus salmoides (largemouth bass): 119892120
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Entry
119892120 CDS
T07309
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03272
Virion - Hepatitis viruses
msam04382
Cornified envelope formation
msam04514
Cell adhesion molecules
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119892120 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119892120 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119892120 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119892120 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119892120 (cldn5a)
04147 Exosome [BR:
msam04147
]
119892120 (cldn5a)
04515 Cell adhesion molecules [BR:
msam04515
]
119892120 (cldn5a)
Cilium and associated proteins [BR:
msam03037
]
Other cilia and associated proteins
Stereociliary proteins
119892120 (cldn5a)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
119892120 (cldn5a)
Exosomal proteins of colorectal cancer cells
119892120 (cldn5a)
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
L1 family
119892120 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
L_HMGIC_fpl
CyanoTRADDas_TM
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
119892120
NCBI-ProteinID:
XP_038560156
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MVSAGLELMGLSLSLFGSLLVMVSCGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALSHDLQAARALTIISAVMGVLGLMVVIAGAQCTNCLRDDNVKARVVNA
GGVIYIISGLFVMVPLCWMANNIISDFYNPQVPASQKREIGAALYIGWAASALLLIGGAL
LCCSCPSSGNSGYSAKYAPTKRTTPNGDYDKRNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgccggactggagctcatgggactatcgctgtcgctatttggctcgctcctg
gtgatggtttcgtgcgggctgcccatgtggaaggtgacggctttcatcgaagccaacatc
gtggtggctcagactatctgggacggcttgtggatgtcgtgtgtggtgcagagtacgggc
cagatgcagtgcaaggtgcacgactccgtcctcgccctcagccacgacctgcaggcggcc
agagcgctcaccatcatctccgcggtgatgggcgtactggggctcatggttgtcatcgct
ggggcgcagtgcaccaactgcctccgcgacgataacgtcaaagcccgggtggtgaacgcc
ggaggggtcatctacataatcagtggtctgtttgtgatggtgcccctctgctggatggcc
aacaacatcatatcggacttctacaatccgcaggtgcccgcatcccagaagagggagatc
ggcgctgcgctctacatcggctgggcggcctcagctctgctgctgatcgggggagcgctg
ctgtgctgctcctgtccctccagcgggaactctggatactctgcaaagtacgcaccgacc
aagagaaccacgccgaacggggactatgacaagaggaattatgtgtag
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integrated database retrieval system