KEGG   Micropterus salmoides (largemouth bass): 119892120
Entry
119892120         CDS       T07309                                 
Symbol
cldn5a
Name
(RefSeq) claudin 5a
  KO
K06087  claudin
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03272  Virion - Hepatitis viruses
msam04382  Cornified envelope formation
msam04514  Cell adhesion molecules
msam04530  Tight junction
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    119892120 (cldn5a)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119892120 (cldn5a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    119892120 (cldn5a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    119892120 (cldn5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:msam03037]
    119892120 (cldn5a)
   04147 Exosome [BR:msam04147]
    119892120 (cldn5a)
   04515 Cell adhesion molecules [BR:msam04515]
    119892120 (cldn5a)
Cilium and associated proteins [BR:msam03037]
 Other cilia and associated proteins
  Stereociliary proteins
   119892120 (cldn5a)
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   119892120 (cldn5a)
  Exosomal proteins of colorectal cancer cells
   119892120 (cldn5a)
Cell adhesion molecules [BR:msam04515]
 Immunoglobulin superfamily
  L1 family
   119892120 (cldn5a)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 L_HMGIC_fpl CyanoTRADDas_TM MFS_MOT1
Other DBs
NCBI-GeneID: 119892120
NCBI-ProteinID: XP_038560156
LinkDB
Position
Unknown
AA seq 215 aa
MVSAGLELMGLSLSLFGSLLVMVSCGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALSHDLQAARALTIISAVMGVLGLMVVIAGAQCTNCLRDDNVKARVVNA
GGVIYIISGLFVMVPLCWMANNIISDFYNPQVPASQKREIGAALYIGWAASALLLIGGAL
LCCSCPSSGNSGYSAKYAPTKRTTPNGDYDKRNYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atggtgtctgccggactggagctcatgggactatcgctgtcgctatttggctcgctcctg
gtgatggtttcgtgcgggctgcccatgtggaaggtgacggctttcatcgaagccaacatc
gtggtggctcagactatctgggacggcttgtggatgtcgtgtgtggtgcagagtacgggc
cagatgcagtgcaaggtgcacgactccgtcctcgccctcagccacgacctgcaggcggcc
agagcgctcaccatcatctccgcggtgatgggcgtactggggctcatggttgtcatcgct
ggggcgcagtgcaccaactgcctccgcgacgataacgtcaaagcccgggtggtgaacgcc
ggaggggtcatctacataatcagtggtctgtttgtgatggtgcccctctgctggatggcc
aacaacatcatatcggacttctacaatccgcaggtgcccgcatcccagaagagggagatc
ggcgctgcgctctacatcggctgggcggcctcagctctgctgctgatcgggggagcgctg
ctgtgctgctcctgtccctccagcgggaactctggatactctgcaaagtacgcaccgacc
aagagaaccacgccgaacggggactatgacaagaggaattatgtgtag

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