Micropterus salmoides (largemouth bass): 119892123
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Entry
119892123 CDS
T07309
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119892123 (tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msam02000
]
119892123 (tmc1)
03037 Cilium and associated proteins [BR:
msam03037
]
119892123 (tmc1)
Transporters [BR:
msam02000
]
Other transporters
Pores ion channels [TC:
1
]
119892123 (tmc1)
Cilium and associated proteins [BR:
msam03037
]
Other cilia and associated proteins
Stereociliary proteins
119892123 (tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
COX16
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
119892123
NCBI-ProteinID:
XP_038560158
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MPRDSLITSENDIEIGLEFTGDEDDVFTVQDELEREERRRKRRDGDREKKKRGNGRRKGA
SRAGEGEDELQARPEKTERGRRRRARNDQEAEGTVRDEEGQAKIKSGKVAKTRKNIRNEE
TRKMEQEEGEPEERNAKGKKKHRSAKNEEKEEEGGKRTVKKEAQKVKKKKHNKVVETSSE
QETSEEDDKEEEDNEEKELRPESLSPEELEKLKEAVEERKKLIQGLRGKPWPMKKKLVTL
RESQEFVEKYEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKDIESH
FGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRAEEASAMDF
AVLWDFGGYAQYSVLFYGYYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNA
NESGVGDDNSFNFSWKMFTSWDYLIGNTETADNKFASITTSFKEAILEEQESHKDDNIHL
TRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLDSHSWWERNEVNMVMSLLGMFC
PMLFDVISTLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIVKFNIT
TWEASLYNGTISENSTAPPNTIHPADMPRGPCWETMVGQEFVRLIISDTMTTYITLLIGD
FLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVL
RLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFD
CGPFSGKKRMFDVIQETLESDFPAWFGKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSY
KEANVDLKKKLQTQNEENKKKNKQAALKAQMDLEEARQATSSQAEQQQKNNNASRQDQED
EEKNQGSSQRVYYGKNGRNPATQLRDQERRLPATRVPVPRTYHHGDHGAPGYLPGFPRQS
ELRMHRVPSLQRH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagacagtctgatcacctctgagaatgacattgaaattggactggaatttaca
ggggacgaggatgatgttttcactgttcaagacgaacttgagagagaagaacgcagaaga
aaaagaagggatggtgacagggaaaagaaaaagaggggaaatgggaggagaaagggagca
tctagagcaggagaaggggaagatgaattacaggccaggcctgagaaaacagagaggggt
aggagaaggagagcaaggaatgatcaagaagcagaaggaacagtgagggacgaagagggg
caggccaaaataaaaagtggtaaggtggcaaaaacgcggaagaatatcagaaatgaagaa
acaagaaaaatggagcaggaggagggagaacctgaagaaagaaatgccaagggaaaaaag
aaacacagaagtgccaaaaatgaagagaaagaagaggaaggaggtaaacgtacagtaaag
aaggaagcacagaaagtgaagaagaaaaaacacaacaaagtagttgaaacaagttcagag
caggagacaagtgaggaagatgacaaagaagaagaggacaatgaggagaaagagttgagg
ccagagtctctgtcaccagaggagctggagaagctgaaggaggcagttgaggagaggaag
aaactgatccaaggactgagggggaaaccttggccaatgaaaaagaaacttgtaacttta
cgagagtctcaggagtttgtggagaagtatgagggagctttggggaaagggaaaggtagg
aagctctatgcatacaaggtcatgatgaccaagaaatggatgaagtttcaacgggacttt
gaaaactttaaaactgcctgcattccatgggaaatgaaaatcaaggacattgaaagtcat
tttggctcctcagttgcctcttactttatcttcctgaggtggatgtatggaatcaacatg
atcttgtttggtctgacctttggcttggttatggtgccagaggcattaatggggcggccc
tatggcagcatcccaagaaagactgtccccagggctgaggaggccagtgccatggacttt
gctgtcctttgggactttggaggttacgctcagtattcagtcctcttctacgggtactac
aacagccagcgtgccattggctggctcaagtttcgtatgcctctgtcatacttcctggtt
ggtgtgggaacagtggcctatagctatatggtggtcataagaacgatggcccgtaatgca
aatgagtcgggagttggagatgataacagctttaatttcagttggaaaatgttcacgagc
tgggactacctgataggaaacactgaaacagcagacaataagtttgcctccataaccacc
agtttcaaggaggcaatcttggaggagcaagagagccacaaggatgacaacatccatctg
actcgttttctccgtgtgctggccaacttcctggtcttatgctgcttagcaggaagtgga
tacctcatctactttgtagtgcgtcgctctcagaagtttgcccttgatggactggatagt
cacagctggtgggaaaggaatgaggtgaacatggtcatgtcattgctggggatgttctgc
cccatgttgtttgacgtcatcagcaccctggagaactaccaccctcgtgttgccctgcag
tggcagctgggtcgcatctttgccctcttccttggaaatctctacaccttcatcattgca
ctcatggatgagatcaacctcaaaagggaagaggaaaagatagtaaagtttaatataacc
acgtgggaagccagtctttacaatggtacaatatccgaaaacagcactgctccacccaac
actatccaccctgctgatatgcccagagggccctgctgggagaccatggtggggcaggag
tttgtccggctgatcatatctgatactatgacaacctacatcacactgctaattggtgat
ttcctgagagctgtgcttgttcgctttctcaactactgctggtgttgggaccttgaggcc
ggatttccgtcctactctgaatttgatgtcagtggcaacgtcctgggtctgattttcaat
caaggaatgatatggatgggtgctttctatgctccctgcctgcctgccttgaacgtcctc
cggctccatgtgtccatgtacctgcagtgctgggctgtgatgtgctgtaatgtgcctcag
gaaagagtcttcaaggcctctggctccaataacttctacatggccatgctgctggtcatc
cttttcctttccactcttcctgccatctacactatcgtcactatccccccttcctttgac
tgcggacccttcagtgggaaaaaacgtatgtttgatgtgatccaagagactcttgagtcg
gacttccctgcctggtttggtaaagtgttcagctatgcctctaaccctggactggtgcta
cccttcatattgcttatggtactggccatttattacttgcaatccacatccaaaagctac
aaagaagccaatgtggatcttaagaaaaaactacaaacgcaaaatgaggagaacaagaag
aagaacaaacaagcagcactgaaggcacaaatggatctagaggaggccagacaagctaca
tcatcacaggctgaacagcaacaaaagaacaacaacgcttcacgacaagaccaagaggat
gaggaaaaaaaccagggcagtagtcagcgggtgtattatggtaagaatggacgcaaccct
gctactcagcttagagaccaagagcgccgtcttccagccaccagagtccctgtccccagg
acttatcaccatggagaccacggagctcctgggtacctgcccggtttccctcggcaaagt
gaacttaggatgcacagggtgccaagcctgcagagacactga
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