KEGG   Micropterus salmoides (largemouth bass): 119892140
Entry
119892140         CDS       T07309                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03082  ATP-dependent chromatin remodeling
msam03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119892140
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119892140
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:msam01009]
    119892140
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msam03021]
    119892140
   03036 Chromosome and associated proteins [BR:msam03036]
    119892140
Protein phosphatases and associated proteins [BR:msam01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119892140
Transcription machinery [BR:msam03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119892140
    SWI/SNF complex
     119892140
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    119892140
   PBAF complex
    119892140
   SWI/SNF complex
    119892140
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 119892140
NCBI-ProteinID: XP_038560181
LinkDB
Position
Unknown
AA seq 339 aa
MFRGSLYKRYPSLWRKLASVEERKKIVESSHDHGYTQLATSVTLLKASEVEEILEGNDEK
YKAVSISTEPPAYLREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPL
CFDDHDPAVIHENATQSEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDL
DLNPLAFVPAIASAIRQQIESYPTDSILEDQADQRVIIKLNIHVGNISLVDQFEWDMSER
ENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDA
DQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgttcagaggctccctgtataaaagatacccgtcattatggagaaaactggcatcagta
gaagaaaggaagaaaatagtggagtcatcacacgatcatggctacactcagctggccaca
agtgtgactctgctgaaggcttcggaggtcgaggagatccttgaaggaaacgatgagaag
tacaaagctgtctccatcagcactgagccccccgcctatctcagggaacagaaggcgaag
aggaacagtcagtgggttcccacactgcccaacagttctcaccacctggatgcggtgccc
tgctccaccaccatcaaccgcagccgtctgggccgagacaagaagaggaccttcccgctg
tgctttgacgaccacgatccagcagtgatccatgagaacgccactcagtctgaggttcta
gttccaatccgtctggacatggagatcgagggacagaagctcagagacgctttcacctgg
aatatgaacgagaagctgatgacgcctgaaatgtttgctgagatcctttgtgacgacctg
gacctcaacccgctggccttcgtccctgccatcgcctccgccatccgacagcagatcgag
tcttatccgacagacagcatcctggaggaccaggcggaccagagggtcatcatcaagtta
aacatccacgttgggaatatctcgctggtcgaccagtttgagtgggatatgtctgagagg
gaaaactctccggagaagttcgccctcaagctttgctctgaacttggcctgggaggggag
tttgtgaccaccatcgcctacagcatccgcggtcagctgagctggcaccagaggacatat
gccttcagtgagaaccctctgcccacagtggagattgccattagaaacacaggtgacgct
gaccagtggtgccccctgctggagaccctgacagatgcggagatggagaagaagatcaga
gatcaggacagaaacacaaggcgaatgaggcgactggcaaacacggcacctgcatggtag

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