Micropterus salmoides (largemouth bass): 119892151
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Entry
119892151 CDS
T07309
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119892151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119892151
03110 Chaperones and folding catalysts [BR:
msam03110
]
119892151
04121 Ubiquitin system [BR:
msam04121
]
119892151
Enzymes [BR:
msam01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
119892151
Spliceosome [BR:
msam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119892151
Complex C
U4/U6.U5 tri-SnRNP related factors
119892151
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
119892151
Chaperones and folding catalysts [BR:
msam03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
119892151
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
U-box type E3
119892151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
Motif
Other DBs
NCBI-GeneID:
119892151
NCBI-ProteinID:
XP_038560202
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTNFYGGKRTEIPQANFRRLPFDHCSLSLQPFEYPVCTEEGVV
FDLLSIVPWIKKYGTNPTTGEKLEAKSLIKLNFAKNNDGKYHCPVLYNVFTNNSHIVANK
VTGNVFSHEAVEQLNIKTKSFKDLLTDEPFTRKDIITLQDPTNLDKFNVSNFFHVKNNLK
VLDPEEEKAKQQPGYHLKTTNLETRETLAELYKDYKGDQLLASTMKEPEAKKTDKLNAAH
YSTGRVSASFTSTAMTPATTHEAEAITDDIVRYQYVKKKGYVRLHTNKGDLNVELHCDKV
PKAGENFIRLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRIVGGFETLTAMENVESDPKSD
KPKSEIKIISATVFVDPYEEADAQIAAEREKELQKQEEEKQQTSIAQKKAKEEQAPKTFK
AGVGKYINPATTKRPAAEDESGPSTSGGAVAKKSKGKSSFGDFSSW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccaaaaagataaaatgtacatcacatgttcagagtacacaaac
ttttatggaggaaagcgaacagaaatcccacaggcaaacttcagacggcttccatttgac
cactgcagcttgtcccttcagccgtttgagtatcctgtctgtactgaagagggagttgtc
tttgacctgctgagcatcgtcccatggatcaagaagtatggtactaatccgaccactgga
gagaaactggaagcaaagtccctcatcaaacttaactttgccaagaacaacgatgggaag
tatcactgccctgttctgtacaacgtcttcacaaataattctcacattgttgccaacaag
gtcaccggcaacgttttttctcatgaggctgttgagcaactcaacattaagaccaaaagt
tttaaagatctgctgacagacgaaccctttactagaaaggacatcataacacttcaggat
cccacaaacctggataaattcaatgtttccaacttcttccatgtaaaaaacaacctgaag
gtgttggatcctgaggaggaaaaggccaagcagcaaccggggtaccacctgaagacaacc
aacctggagaccagggagaccttagcggagctgtacaaagactacaagggggatcagctc
ctggcgtccactatgaaggaaccagaggccaagaagacagacaaattaaacgcagcccac
tactccacaggcagagtttccgcctcctttacatccacagccatgactcctgcaacaaca
cacgaagcagaggccatcacagacgacattgtgcgttaccagtatgtgaagaaaaaaggc
tacgtccgtctacacacaaacaagggagacctgaatgttgagttgcactgtgataaggtt
cccaaagctggagagaattttatccgtctgtgtaaaaaaggctactatgacgggacaatc
ttccacagatccatccggaatttcatgattcaaggaggggaccccactggcaccggcaca
ggaggggaatccttctggggaaaacctttcaaggatgagtttcggcccaacctctcccat
accggcagggggattctcagcatggcaaactctggtccaaacaccaacaagtcccaattc
ttcatcactttccggtcatgcacctacctcgacaggaagcacactgtgtttggaaggatt
gttggtggatttgaaacactcacagccatggagaatgtggagagtgatcccaaatcagac
aaaccaaagtcggagatcaagatcataagtgcgactgttttcgtggacccgtacgaagag
gctgacgctcagattgcagcagagcgagaaaaggagctgcagaagcaggaggaggagaaa
cagcagaccagcatcgcccagaagaaagccaaggaggagcaggcgcccaagaccttcaaa
gcgggtgtagggaaatacatcaaccctgccacaacaaaacgtcccgctgctgaagatgaa
agcgggccgtccaccagcggaggagcagtggccaagaagtccaaaggcaagagcagcttt
ggagacttcagctcctggtag
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