Micropterus salmoides (largemouth bass): 119892206
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Entry
119892206 CDS
T07309
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119892206
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119892206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
119892206
NCBI-ProteinID:
XP_038560283
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MSEKDNSFPTQIFSANRYKALNYVFETTTSLKVMMNLLALPTPYFTGTSNLYPHSGKLPE
VTYRTPWSRGKVISTCKLVVSGSVLDDLGEKKQPVNSPERFSVTLSEVHRDVEVIPSSNP
DSVKDLDQDEYVCLLKEAQINDPCQESFVKWTTDQMNPGNKTEGYSSALDLLLQEELMVV
DYLPHFKKHLPTLKAKLSRLRTLPVADPLLSSTGDTITEDAIFRHCASYDKPPDVNTSDI
HMCANIHEEFCKESLTKEESLLLPVVVDTLNLSQENFTAFSSICHKMSVAPEQLDEQPPV
LHVLRKAPLPHVSASVDISQYEIPEEPSKQFEMNGGLMEADLAGRLTLPAEMELDVTLTP
STSQTQICLSTCKLQKEEMSPLCRRSLVSASAQREMWTALWRAEKHPAFVVGFLLAEPQI
HEPAVDFQPLSEALRVMKLENQSFISVGDKQQSPVGCVITPQVYLCRNCEFTESMLSEFN
SNEQEKMEDFNKRSPEHVEFTIRSILENPANKTQFSHLKKSEAAEATADDTLLQKEKAAD
TSQNTFLMHTVNTNDKEVKPATTTKDEVSHKRFPEVVDDCKVEQSAHMLKQAVSSRLNIK
DNHRGLLVKEHPPEKDLDPLSTFMILRSQQTASVTATLQSFVSTPAPKVDQQTPPPELQP
SPEQMQRSDRRLTYVSGTVTGNATREQKAAFQSTGQLISRPVSPSIPQDRQESRVVQVQA
TASQQHAYCELLAFAQPCLSSARELWLNFPVWGDFSCLAPDQTHFLLKQQEKALCRTHEK
SAELVRDREVLFNQAAQIHVLVTFKELLLKCDLSTALEYLTKAAEACAEQSLKQLVKRLQ
IILFLSQKNQESNLKVLELQQLLPARLHSRKGQNVAEKILVLISVDSDDTRSIIINSLSK
VTGAAVTAVCPEEGKKTLNGASLISSSMRDSVCVVVCEQHVGPDFPWSCFSLVIEYDHPG
QSPWAAVCRERSISHLTFNTIICDTETEETSWLLEENVPCVLFVTEGLLNCPLLLQTLES
GFKITVLERTYCPSLQMLGGTHRYAVITVDESTAIVIQEEGELCQERASERVVMRLTALS
LQYSCCWLILHCPDRQGGGFSSEAFSNLVLVYSSLVLFGMKSEDLDVKVLIVSEVMEIAK
WISKICFHRLTASDRDPLSWLDRDWLTVIPSEEEKCLLQFPCINPLVGQLLLRRAPSFQW
LLGASLSQLKELIPEVPHKVLKLFSDTTSLYTLTTEPNQPESQTLITDTNQQTSPPNSTW
TTAAAPEHMNSDPQPEPPINPHPELFCSDDTSFLLGADRSFGEPDPDSMVQDGNTDFRLD
LSSSFGSPDVHLTRSWTSGDPWKEEDRGRKEVMFSGRRGRAGAAGRVVERAKDVWTQRAP
AKLDSPFKLDSMFGFSPIHQQPASSQMSTFSSVYSDRQHPDCHRISYSLSPPAEVLLWGR
GQTSNECLTSRGETASLSAKYGPKCWMGQERKRTGKAAGLVGTVLTPLKKGRLSYERVPG
RSDGQTRLKLF
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaggacaactcttttcctactcagattttctctgcaaacagatacaaagct
ctcaactatgtttttgagaccaccaccagtctgaaagtaatgatgaacctgctggcactg
ccaacaccttacttcactggtaccagtaacctctacccccatagtggcaagctgcctgaa
gtcacttacaggacgccatggagcagaggaaaggtgatctccacctgcaaactcgttgtc
agtggttccgtgctcgatgacctgggagaaaaaaagcaaccggttaattcaccagaaaga
tttagcgtgactctgagtgaggtgcatagggatgtggaggtgatacccagctctaatcct
gactcagtgaaggatctagaccaggatgagtatgtctgccttttaaaggaggcgcagatc
aacgatccatgtcaggaatcatttgtcaagtggacaactgaccagatgaatcctggaaat
aagacagagggttactcatcagctctggatctcctcctgcaagaggagctcatggttgtc
gattacctgccacattttaagaaacatttacccacgctgaaggccaaactgtccaggctg
aggacccttcctgttgccgaccccttgctgagctcaacaggagataccatcactgaggac
gccatattcagacactgtgcgtcttatgacaaacctcctgatgtgaacaccagtgacatt
cacatgtgtgcaaacattcatgaggagttttgtaaagagtcactaacaaaagaagagagt
ctgctgttgccggttgtggtggacacactgaatctgagccaagaaaatttcaccgccttt
tcaagcatttgtcataaaatgagtgttgctcctgaacagctggatgagcagcctccagtt
ctgcacgtgcttcgtaaagctccccttccacacgtatcagcgtcagtggacatttcccag
tatgagataccagaggagcccagcaaacaattcgagatgaatggaggcctgatggaggca
gatttggcaggacgtttgacgcttccggctgaaatggagctggacgtgactttgactccc
agcaccagtcaaacccaaatctgtctgtccacatgtaaactccagaaggaagagatgtcg
ccgctctgcagacgatctctggtgtcagcgagcgctcagagagagatgtggacggccctc
tggagggcagagaagcatccagcctttgtggtgggcttcctgttggcagagccccaaata
catgaaccagctgttgacttccagcctctgtctgaagccttgagagtcatgaagttagag
aaccaaagctttatcagcgtcggtgacaaacagcagtcaccggtggggtgtgttataacc
ccgcaagtgtatttgtgcagaaactgcgagttcactgagagcatgttgtctgagttcaac
tccaacgagcaggaaaagatggaagacttcaacaaacggtcacctgaacatgtggagttc
acaatcagatccatcctggagaatcccgcaaacaaaactcagttttctcacctgaagaaa
tctgaagctgctgaagctactgcagacgacacccttcttcaaaaagaaaaggctgctgat
acgtctcagaacaccttcctgatgcacactgtcaacacaaatgataaggaagtaaaacct
gctactaccaccaaagatgaagtttcacacaagaggtttccagaagttgtggacgactgt
aaggtagaacagagcgcccacatgctcaagcaggctgtctcctccagactgaatatcaaa
gacaatcacagaggtctgctggttaaagaacatccaccagagaaggaccttgaccctctg
tccaccttcatgatattaagatctcagcagacagcttcagttactgcaacactgcagagc
ttcgtcagcactccagcaccaaaagtggatcaacagacgccaccacctgagctgcagccg
tctccagagcagatgcaaagatcagacaggaggctaacgtatgtgagcggtactgtgaca
ggaaatgctaccagagagcagaaagcagcttttcagtcgacaggtcaactcatcagtcgt
cctgtcagtccgtccatccctcaggacagacaagaaagcagagtagtacaggtccaagct
accgccagccagcagcacgcctactgtgagttgctggcctttgctcagccctgtttgagc
tctgccagagagctgtggctcaacttccccgtgtggggagatttcagctgcctggcccca
gaccaaacacacttcctcctcaaacagcaagagaaggccctctgcaggacacatgaaaag
agcgcagagctggtcagagatcgggaagtgcttttcaaccaggcggctcagattcatgtg
ctggtgacgttcaaggagctgttgctgaagtgtgacctcagtactgcactggagtacctg
accaaggcagctgaggcgtgtgcagagcagagtctgaagcagctggtgaagaggctgcag
atcatcctcttcctcagtcaaaagaaccaggagtccaacctcaaagtgctggagctgcag
cagctgctgcctgcacggctgcacagcagaaaaggacagaacgttgcagagaaaattctt
gtcttaatatcagtcgactctgacgacaccagatctataatcatcaacagcttgagcaaa
gtgactggtgctgctgtaactgcagtttgtcctgaggagggcaagaaaacacttaatggt
gccagtttgatcagcagcagcatgcgcgacagtgtgtgtgtggtggtgtgtgagcagcac
gtgggccccgacttcccctggagctgtttctctctggtgattgagtatgaccatccaggt
cagtcaccatgggccgcagtctgcagagagaggagcatcagtcacctcaccttcaacaca
ataatctgcgacactgagacggaagaaacctcgtggttgctggaggaaaatgtgccatgt
gtgttgtttgtcacagaggggcttctcaactgtccactactgctacagacactcgagtca
gggtttaaaataactgtgctggagaggacctactgtccgtccttgcagatgctcggaggg
acccatcgctacgctgtgatcacagtggatgaaagcaccgctatcgtcattcaggaggag
ggtgaactgtgtcaggagcgagccagtgagagagtagtgatgaggcttactgctctctct
ctgcaatacagctgctgttggctcatcctgcactgcccagacaggcagggaggaggattt
tccagcgaagccttcagcaatttggtgttggtttattcgtctctggtgctgttcggcatg
aagtcagaggatctagacgtcaaggtgctgattgtgtccgaggtgatggaaatagccaaa
tggatcagcaagatctgcttccaccgcctgacggccagtgacagggaccctctcagctgg
ctggacagagactggctgactgtgattccctcggaggaggaaaagtgtctattacagttc
ccatgtattaaccctctggttggtcagctattgctgaggagagcaccatccttccagtgg
ctcctgggggcctctctgtctcagttgaaggagctgatccctgaggtgccacataaagtc
ctcaagctgttcagtgacaccacctccctgtacacactgaccacagagccgaaccagccg
gagtctcagacacttatcactgacacaaaccaacaaaccagtccaccaaacagcacctgg
accaccgctgctgccccggagcacatgaactctgacccacaaccagaaccccccatcaac
cctcatccagaacttttctgtagtgacgacaccagcttcctgctcggagctgatcgcagc
ttcggtgaaccagacccagactcgatggtgcaggatggcaacacagatttcagactcgac
ctgagttcttcctttggcagcccagatgttcacctcacgagaagctggaccagcggtgat
ccatggaaagaggaagacagaggcagaaaggaggtgatgttttctggccgcagaggcaga
gctggagcagcggggagagttgttgaaagagcaaaagatgtgtggacacagagggctcca
gcaaagctcgacagtcctttcaagctggactccatgttcggtttcagccccatccaccag
cagccagccagcagtcaaatgtccacgttctcctcggtctacagtgaccgccaacatcca
gactgccaccgcatttcctatagtctgagccctcctgcagaggtcctgctgtggggtcga
ggacaaaccagcaacgaatgcctcaccagtagaggagagacggcgtcgctttcagctaag
tatggccccaaatgctggatgggacaagagaggaagaggacgggcaaggctgcaggtttg
gttggaacagtgttgacaccactgaagaaggggaggttgagctatgagagggtgcccggc
agaagtgatggacagactaggcttaaattattttag
DBGET
integrated database retrieval system
